Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.56□□□□□ -1.68
CCSER1Q9C0I3 AC243654.2-201ENST00000612843 443 ntBASIC4.56□□□□□ -1.68
CCSER1Q9C0I3 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCSER1Q9C0I3 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCSER1Q9C0I3 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCSER1Q9C0I3 AC068831.8-201ENST00000620171 435 ntBASIC4.56□□□□□ -1.68
CCSER1Q9C0I3 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.56□□□□□ -1.68
CCSER1Q9C0I3 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CCSER1Q9C0I3 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.56□□□□□ -1.68
CCSER1Q9C0I3 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.56□□□□□ -1.68
CCSER1Q9C0I3 ZNF962P-201ENST00000443465 3140 ntBASIC4.56□□□□□ -1.68
CCSER1Q9C0I3 AC010300.1-201ENST00000600671 5134 ntBASIC4.56□□□□□ -1.68
CCSER1Q9C0I3 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCSER1Q9C0I3 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CCSER1Q9C0I3 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCSER1Q9C0I3 USP9YP4-201ENST00000424401 1745 ntBASIC4.55□□□□□ -1.68
CCSER1Q9C0I3 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
CCSER1Q9C0I3 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCSER1Q9C0I3 SNORD35B-201ENST00000363660 87 ntBASIC4.55□□□□□ -1.68
CCSER1Q9C0I3 RNU11-4P-201ENST00000391149 133 ntBASIC4.55□□□□□ -1.68
CCSER1Q9C0I3 RPS26P8-201ENST00000393490 348 ntBASIC4.55□□□□□ -1.68
CCSER1Q9C0I3 JKAMPP1-201ENST00000413804 919 ntBASIC4.55□□□□□ -1.68
CCSER1Q9C0I3 AL138785.1-201ENST00000425821 331 ntBASIC4.55□□□□□ -1.68
CCSER1Q9C0I3 MRPL50P1-201ENST00000431951 384 ntBASIC4.55□□□□□ -1.68
CCSER1Q9C0I3 MTCO1P52-201ENST00000433928 531 ntBASIC4.55□□□□□ -1.68
CCSER1Q9C0I3 MTND2P21-201ENST00000436242 1042 ntBASIC4.55□□□□□ -1.68
CCSER1Q9C0I3 AL031663.1-201ENST00000437445 219 ntBASIC4.55□□□□□ -1.68
CCSER1Q9C0I3 FGF7P3-201ENST00000454645 303 ntBASIC4.55□□□□□ -1.68
CCSER1Q9C0I3 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
CCSER1Q9C0I3 AC068587.1-201ENST00000483613 781 ntBASIC4.55□□□□□ -1.68
CCSER1Q9C0I3 OR9N1P-202ENST00000494289 481 ntBASIC4.55□□□□□ -1.68
CCSER1Q9C0I3 AC139783.2-201ENST00000504847 1145 ntBASIC4.55□□□□□ -1.68
CCSER1Q9C0I3 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
CCSER1Q9C0I3 HPRT1P2-201ENST00000505250 544 ntBASIC4.55□□□□□ -1.68
CCSER1Q9C0I3 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.55□□□□□ -1.68
CCSER1Q9C0I3 SNORD116-26-201ENST00000516006 96 ntBASIC4.55□□□□□ -1.68
CCSER1Q9C0I3 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.55□□□□□ -1.68
CCSER1Q9C0I3 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.55□□□□□ -1.68
CCSER1Q9C0I3 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.55□□□□□ -1.68
CCSER1Q9C0I3 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.55□□□□□ -1.68
CCSER1Q9C0I3 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCSER1Q9C0I3 TOMM20P2-201ENST00000540082 421 ntBASIC4.55□□□□□ -1.68
CCSER1Q9C0I3 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.55□□□□□ -1.68
CCSER1Q9C0I3 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.55□□□□□ -1.68
CCSER1Q9C0I3 AC025627.2-201ENST00000576220 160 ntBASIC4.55□□□□□ -1.68
CCSER1Q9C0I3 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.55□□□□□ -1.68
CCSER1Q9C0I3 AC242628.1-201ENST00000606810 391 ntBASIC4.55□□□□□ -1.68
CCSER1Q9C0I3 AC092653.1-201ENST00000608509 531 ntBASIC4.55□□□□□ -1.68
CCSER1Q9C0I3 AC026368.1-201ENST00000614934 690 ntBASIC4.55□□□□□ -1.68
CCSER1Q9C0I3 AC233309.1-201ENST00000619522 751 ntBASIC4.55□□□□□ -1.68
CCSER1Q9C0I3 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.55□□□□□ -1.68
CCSER1Q9C0I3 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.55□□□□□ -1.68
CCSER1Q9C0I3 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.55□□□□□ -1.68
CCSER1Q9C0I3 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.55□□□□□ -1.68
CCSER1Q9C0I3 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CCSER1Q9C0I3 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCSER1Q9C0I3 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CCSER1Q9C0I3 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CCSER1Q9C0I3 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.54□□□□□ -1.68
CCSER1Q9C0I3 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCSER1Q9C0I3 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCSER1Q9C0I3 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CCSER1Q9C0I3 SNORA62.2-201ENST00000364672 152 ntBASIC4.54□□□□□ -1.68
CCSER1Q9C0I3 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCSER1Q9C0I3 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.54□□□□□ -1.68
CCSER1Q9C0I3 ENSAP1-201ENST00000392855 326 ntBASIC4.54□□□□□ -1.68
CCSER1Q9C0I3 LAP3P1-201ENST00000403648 294 ntBASIC4.54□□□□□ -1.68
CCSER1Q9C0I3 HMGB3P19-201ENST00000403971 560 ntBASIC4.54□□□□□ -1.68
CCSER1Q9C0I3 RPL31P52-201ENST00000407532 367 ntBASIC4.54□□□□□ -1.68
CCSER1Q9C0I3 HSPE1P12-201ENST00000412576 301 ntBASIC4.54□□□□□ -1.68
CCSER1Q9C0I3 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.54□□□□□ -1.68
CCSER1Q9C0I3 AC108032.1-201ENST00000416706 207 ntBASIC4.54□□□□□ -1.68
CCSER1Q9C0I3 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.54□□□□□ -1.68
CCSER1Q9C0I3 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.54□□□□□ -1.68
CCSER1Q9C0I3 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.54□□□□□ -1.68
CCSER1Q9C0I3 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.54□□□□□ -1.68
CCSER1Q9C0I3 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.54□□□□□ -1.68
CCSER1Q9C0I3 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.54□□□□□ -1.68
CCSER1Q9C0I3 AC069285.2-201ENST00000440210 275 ntBASIC4.54□□□□□ -1.68
CCSER1Q9C0I3 RPS4XP4-201ENST00000443195 763 ntBASIC4.54□□□□□ -1.68
CCSER1Q9C0I3 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.54□□□□□ -1.68
CCSER1Q9C0I3 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.54□□□□□ -1.68
CCSER1Q9C0I3 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.54□□□□□ -1.68
CCSER1Q9C0I3 TPMTP4-201ENST00000450749 678 ntBASIC4.54□□□□□ -1.68
CCSER1Q9C0I3 FABP3P2-201ENST00000453169 399 ntBASIC4.54□□□□□ -1.68
CCSER1Q9C0I3 AC133473.1-201ENST00000455173 299 ntBASIC4.54□□□□□ -1.68
CCSER1Q9C0I3 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.54□□□□□ -1.68
CCSER1Q9C0I3 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.54□□□□□ -1.68
CCSER1Q9C0I3 AC108043.1-201ENST00000512696 574 ntBASIC4.54□□□□□ -1.68
CCSER1Q9C0I3 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC4.54□□□□□ -1.68
CCSER1Q9C0I3 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.54□□□□□ -1.68
CCSER1Q9C0I3 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.54□□□□□ -1.68
CCSER1Q9C0I3 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
CCSER1Q9C0I3 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.54□□□□□ -1.68
CCSER1Q9C0I3 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.54□□□□□ -1.68
CCSER1Q9C0I3 AL451044.1-201ENST00000604867 238 ntBASIC4.54□□□□□ -1.68
CCSER1Q9C0I3 AL355816.1-201ENST00000607951 118 ntBASIC4.54□□□□□ -1.68
CCSER1Q9C0I3 AL096803.3-201ENST00000609032 532 ntBASIC4.54□□□□□ -1.68
CCSER1Q9C0I3 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.54□□□□□ -1.68
CCSER1Q9C0I3 AC023043.4-201ENST00000612081 449 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms