Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 MIR4776-2-201ENST00000580204 80 ntBASIC6.46□□□□□ -1.38
COL25A1Q9BXS0 AC069061.3-201ENST00000582254 823 ntBASIC6.46□□□□□ -1.38
COL25A1Q9BXS0 RN7SL52P-201ENST00000584271 284 ntBASIC6.46□□□□□ -1.38
COL25A1Q9BXS0 MIR3942-201ENST00000585264 109 ntBASIC6.46□□□□□ -1.38
COL25A1Q9BXS0 AF038458.1-201ENST00000588406 262 ntBASIC6.46□□□□□ -1.38
COL25A1Q9BXS0 AC006157.1-201ENST00000611750 366 ntBASIC6.46□□□□□ -1.38
COL25A1Q9BXS0 RN7SL722P-201ENST00000617780 284 ntBASIC6.46□□□□□ -1.38
COL25A1Q9BXS0 RN7SL565P-201ENST00000618246 284 ntBASIC6.46□□□□□ -1.38
COL25A1Q9BXS0 PLEKHS1-207ENST00000619563 3247 ntTSL 5 BASIC6.46□□□□□ -1.38
COL25A1Q9BXS0 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC6.46□□□□□ -1.38
COL25A1Q9BXS0 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC6.46□□□□□ -1.38
COL25A1Q9BXS0 CU639417.4-201ENST00000623928 207 ntBASIC6.46□□□□□ -1.38
COL25A1Q9BXS0 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC6.46□□□□□ -1.38
COL25A1Q9BXS0 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC6.46□□□□□ -1.38
COL25A1Q9BXS0 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
COL25A1Q9BXS0 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL25A1Q9BXS0 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC6.46□□□□□ -1.38
COL25A1Q9BXS0 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.46□□□□□ -1.38
COL25A1Q9BXS0 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL25A1Q9BXS0 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL25A1Q9BXS0 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC6.46□□□□□ -1.38
COL25A1Q9BXS0 NMD3-201ENST00000351193 3049 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL25A1Q9BXS0 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
COL25A1Q9BXS0 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
COL25A1Q9BXS0 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
COL25A1Q9BXS0 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL25A1Q9BXS0 LINC00960-202ENST00000492922 2126 ntTSL 2 BASIC6.46□□□□□ -1.38
COL25A1Q9BXS0 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC6.46□□□□□ -1.38
COL25A1Q9BXS0 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.46□□□□□ -1.38
COL25A1Q9BXS0 SLC8A3-208ENST00000533541 3409 ntTSL 2 BASIC6.46□□□□□ -1.38
COL25A1Q9BXS0 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC6.45□□□□□ -1.38
COL25A1Q9BXS0 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
COL25A1Q9BXS0 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
COL25A1Q9BXS0 RACGAP1P-201ENST00000550663 1879 ntBASIC6.45□□□□□ -1.38
COL25A1Q9BXS0 AC087280.2-201ENST00000637205 4822 ntTSL 5 BASIC6.45□□□□□ -1.38
COL25A1Q9BXS0 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL25A1Q9BXS0 AL449283.1-201ENST00000602631 3403 ntBASIC6.45□□□□□ -1.38
COL25A1Q9BXS0 AC026464.2-201ENST00000567834 2421 ntBASIC6.45□□□□□ -1.38
COL25A1Q9BXS0 RNU6-582P-201ENST00000362989 107 ntBASIC6.45□□□□□ -1.38
COL25A1Q9BXS0 RNA5SP394-201ENST00000364216 119 ntBASIC6.45□□□□□ -1.38
COL25A1Q9BXS0 SNORD50B-201ENST00000364995 70 ntBASIC6.45□□□□□ -1.38
COL25A1Q9BXS0 Y_RNA.414-201ENST00000384011 101 ntBASIC6.45□□□□□ -1.38
COL25A1Q9BXS0 SSXP10-201ENST00000402595 565 ntBASIC6.45□□□□□ -1.38
COL25A1Q9BXS0 SNORA11F-201ENST00000408237 128 ntBASIC6.45□□□□□ -1.38
COL25A1Q9BXS0 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL25A1Q9BXS0 RNU6-193P-201ENST00000410977 107 ntBASIC6.45□□□□□ -1.38
COL25A1Q9BXS0 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC6.45□□□□□ -1.38
COL25A1Q9BXS0 AC009237.10-201ENST00000414112 510 ntBASIC6.45□□□□□ -1.38
COL25A1Q9BXS0 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC6.45□□□□□ -1.38
COL25A1Q9BXS0 RGS17P1-201ENST00000423358 553 ntBASIC6.45□□□□□ -1.38
COL25A1Q9BXS0 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC6.45□□□□□ -1.38
COL25A1Q9BXS0 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
COL25A1Q9BXS0 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC6.45□□□□□ -1.38
COL25A1Q9BXS0 EIF4EBP2P1-201ENST00000450009 343 ntBASIC6.45□□□□□ -1.38
COL25A1Q9BXS0 AC002553.2-201ENST00000453217 340 ntBASIC6.45□□□□□ -1.38
COL25A1Q9BXS0 RNU6-1132P-201ENST00000459214 107 ntBASIC6.45□□□□□ -1.38
COL25A1Q9BXS0 AC097493.1-201ENST00000463958 372 ntBASIC6.45□□□□□ -1.38
COL25A1Q9BXS0 AC092865.4-201ENST00000477936 615 ntBASIC6.45□□□□□ -1.38
COL25A1Q9BXS0 AC092451.1-201ENST00000480211 153 ntBASIC6.45□□□□□ -1.38
COL25A1Q9BXS0 AC108688.1-201ENST00000485817 713 ntBASIC6.45□□□□□ -1.38
COL25A1Q9BXS0 AC026784.1-201ENST00000507986 352 ntBASIC6.45□□□□□ -1.38
COL25A1Q9BXS0 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC6.45□□□□□ -1.38
COL25A1Q9BXS0 RPL39P5-202ENST00000512505 151 ntBASIC6.45□□□□□ -1.38
COL25A1Q9BXS0 RN7SKP24-201ENST00000515888 284 ntBASIC6.45□□□□□ -1.38
COL25A1Q9BXS0 RNU4-29P-201ENST00000515943 174 ntBASIC6.45□□□□□ -1.38
COL25A1Q9BXS0 RNU6-138P-201ENST00000515952 107 ntBASIC6.45□□□□□ -1.38
COL25A1Q9BXS0 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC6.45□□□□□ -1.38
COL25A1Q9BXS0 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.45□□□□□ -1.38
COL25A1Q9BXS0 OR4R1P-201ENST00000529879 463 ntBASIC6.45□□□□□ -1.38
COL25A1Q9BXS0 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC6.45□□□□□ -1.38
COL25A1Q9BXS0 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.45□□□□□ -1.38
COL25A1Q9BXS0 AC013283.1-201ENST00000557282 492 ntBASIC6.45□□□□□ -1.38
COL25A1Q9BXS0 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.45□□□□□ -1.38
COL25A1Q9BXS0 MIR8062-201ENST00000621515 85 ntBASIC6.45□□□□□ -1.38
COL25A1Q9BXS0 AC091953.3-201ENST00000623220 236 ntBASIC6.45□□□□□ -1.38
COL25A1Q9BXS0 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC6.45□□□□□ -1.38
COL25A1Q9BXS0 TEX41-254ENST00000626394 423 ntTSL 5 BASIC6.45□□□□□ -1.38
COL25A1Q9BXS0 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC6.45□□□□□ -1.38
COL25A1Q9BXS0 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL25A1Q9BXS0 KCNK2-203ENST00000444842 3379 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL25A1Q9BXS0 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
COL25A1Q9BXS0 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.45□□□□□ -1.38
COL25A1Q9BXS0 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC6.45□□□□□ -1.38
COL25A1Q9BXS0 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL25A1Q9BXS0 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
COL25A1Q9BXS0 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL25A1Q9BXS0 LRIG3-202ENST00000379141 3667 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
COL25A1Q9BXS0 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC6.45□□□□□ -1.38
COL25A1Q9BXS0 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL25A1Q9BXS0 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL25A1Q9BXS0 CCDC62-203ENST00000392440 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
COL25A1Q9BXS0 MID1-212ENST00000616003 1926 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COL25A1Q9BXS0 PARN-201ENST00000341484 2100 ntTSL 2 BASIC6.44□□□□□ -1.38
COL25A1Q9BXS0 USPL1-201ENST00000255304 3814 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL25A1Q9BXS0 KRT73-AS1-203ENST00000552364 3808 ntTSL 2 BASIC6.44□□□□□ -1.38
COL25A1Q9BXS0 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC6.44□□□□□ -1.38
COL25A1Q9BXS0 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC6.44□□□□□ -1.38
COL25A1Q9BXS0 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COL25A1Q9BXS0 CD46-208ENST00000367042 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL25A1Q9BXS0 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms