Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 HCG14-201ENST00000444986 413 ntTSL 2 BASIC7.27□□□□□ -1.25
CCDC85AQ96PX6 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC7.27□□□□□ -1.25
CCDC85AQ96PX6 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC7.27□□□□□ -1.25
CCDC85AQ96PX6 Z82190.1-201ENST00000454534 490 ntBASIC7.27□□□□□ -1.25
CCDC85AQ96PX6 ALG13-211ENST00000473389 693 ntTSL 2 BASIC7.27□□□□□ -1.25
CCDC85AQ96PX6 AC015724.1-201ENST00000478577 156 ntBASIC7.27□□□□□ -1.25
CCDC85AQ96PX6 RPL38P3-201ENST00000484463 213 ntBASIC7.27□□□□□ -1.25
CCDC85AQ96PX6 RN7SL466P-201ENST00000497546 295 ntBASIC7.27□□□□□ -1.25
CCDC85AQ96PX6 KLRA1P-201ENST00000503499 986 ntBASIC7.27□□□□□ -1.25
CCDC85AQ96PX6 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC7.27□□□□□ -1.25
CCDC85AQ96PX6 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC7.27□□□□□ -1.25
CCDC85AQ96PX6 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC7.27□□□□□ -1.25
CCDC85AQ96PX6 HMGB1P42-201ENST00000532126 553 ntBASIC7.27□□□□□ -1.25
CCDC85AQ96PX6 AL121594.2-201ENST00000541658 472 ntBASIC7.27□□□□□ -1.25
CCDC85AQ96PX6 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC7.27□□□□□ -1.25
CCDC85AQ96PX6 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC7.27□□□□□ -1.25
CCDC85AQ96PX6 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC7.27□□□□□ -1.25
CCDC85AQ96PX6 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC7.27□□□□□ -1.25
CCDC85AQ96PX6 AC097468.3-201ENST00000607956 456 ntBASIC7.27□□□□□ -1.25
CCDC85AQ96PX6 AL132765.2-201ENST00000610812 351 ntBASIC7.27□□□□□ -1.25
CCDC85AQ96PX6 AL158801.5-201ENST00000623123 465 ntBASIC7.27□□□□□ -1.25
CCDC85AQ96PX6 AC091905.1-201ENST00000624400 311 ntBASIC7.27□□□□□ -1.25
CCDC85AQ96PX6 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC7.27□□□□□ -1.25
CCDC85AQ96PX6 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC7.27□□□□□ -1.25
CCDC85AQ96PX6 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
CCDC85AQ96PX6 AC009779.8-201ENST00000641684 4384 ntBASIC7.27□□□□□ -1.25
CCDC85AQ96PX6 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CCDC85AQ96PX6 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CCDC85AQ96PX6 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CCDC85AQ96PX6 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC7.27□□□□□ -1.25
CCDC85AQ96PX6 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
CCDC85AQ96PX6 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC7.27□□□□□ -1.25
CCDC85AQ96PX6 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CCDC85AQ96PX6 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
CCDC85AQ96PX6 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CCDC85AQ96PX6 GTF2IP4-201ENST00000453092 2054 ntBASIC7.26□□□□□ -1.25
CCDC85AQ96PX6 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC7.26□□□□□ -1.25
CCDC85AQ96PX6 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC7.26□□□□□ -1.25
CCDC85AQ96PX6 MTND5P23-201ENST00000430812 1655 ntBASIC7.26□□□□□ -1.25
CCDC85AQ96PX6 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC7.26□□□□□ -1.25
CCDC85AQ96PX6 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC7.26□□□□□ -1.25
CCDC85AQ96PX6 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CCDC85AQ96PX6 FRG1BP-201ENST00000278882 761 ntBASIC7.26□□□□□ -1.25
CCDC85AQ96PX6 IGKV7-3-201ENST00000357453 298 ntBASIC7.26□□□□□ -1.25
CCDC85AQ96PX6 FRG1CP-201ENST00000358464 769 ntBASIC7.26□□□□□ -1.25
CCDC85AQ96PX6 AL450338.1-201ENST00000407987 512 ntBASIC7.26□□□□□ -1.25
CCDC85AQ96PX6 MIR1178-201ENST00000408396 91 ntBASIC7.26□□□□□ -1.25
CCDC85AQ96PX6 AC116036.1-201ENST00000412199 367 ntBASIC7.26□□□□□ -1.25
CCDC85AQ96PX6 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC7.26□□□□□ -1.25
CCDC85AQ96PX6 MTND2P23-201ENST00000422990 651 ntBASIC7.26□□□□□ -1.25
CCDC85AQ96PX6 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC7.26□□□□□ -1.25
CCDC85AQ96PX6 ISCA1P6-201ENST00000427740 390 ntBASIC7.26□□□□□ -1.25
CCDC85AQ96PX6 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC7.26□□□□□ -1.25
CCDC85AQ96PX6 HMGB3P9-201ENST00000441799 583 ntBASIC7.26□□□□□ -1.25
CCDC85AQ96PX6 EIF4A1P6-201ENST00000448133 1210 ntBASIC7.26□□□□□ -1.25
CCDC85AQ96PX6 AC140076.1-201ENST00000449897 361 ntBASIC7.26□□□□□ -1.25
CCDC85AQ96PX6 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC7.26□□□□□ -1.25
CCDC85AQ96PX6 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC7.26□□□□□ -1.25
CCDC85AQ96PX6 MEMO1P3-201ENST00000459811 302 ntBASIC7.26□□□□□ -1.25
CCDC85AQ96PX6 RPS20P20-201ENST00000460498 340 ntBASIC7.26□□□□□ -1.25
CCDC85AQ96PX6 AC097493.1-201ENST00000463958 372 ntBASIC7.26□□□□□ -1.25
CCDC85AQ96PX6 PFN1P6-201ENST00000476786 399 ntBASIC7.26□□□□□ -1.25
CCDC85AQ96PX6 AC022215.1-201ENST00000481770 362 ntBASIC7.26□□□□□ -1.25
CCDC85AQ96PX6 RPS27P23-201ENST00000487608 251 ntBASIC7.26□□□□□ -1.25
CCDC85AQ96PX6 AC009120.1-201ENST00000493458 473 ntBASIC7.26□□□□□ -1.25
CCDC85AQ96PX6 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC7.26□□□□□ -1.25
CCDC85AQ96PX6 NAF1-205ENST00000509434 385 ntTSL 3 BASIC7.26□□□□□ -1.25
CCDC85AQ96PX6 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC7.26□□□□□ -1.25
CCDC85AQ96PX6 AC139365.2-201ENST00000517972 253 ntBASIC7.26□□□□□ -1.25
CCDC85AQ96PX6 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC7.26□□□□□ -1.25
CCDC85AQ96PX6 RGS4-207ENST00000527809 817 ntTSL 4 BASIC7.26□□□□□ -1.25
CCDC85AQ96PX6 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC7.26□□□□□ -1.25
CCDC85AQ96PX6 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC7.26□□□□□ -1.25
CCDC85AQ96PX6 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CCDC85AQ96PX6 AC008126.1-201ENST00000549019 480 ntBASIC7.26□□□□□ -1.25
CCDC85AQ96PX6 HIF1AP1-201ENST00000553642 175 ntBASIC7.26□□□□□ -1.25
CCDC85AQ96PX6 NMNAT1P1-201ENST00000554095 876 ntBASIC7.26□□□□□ -1.25
CCDC85AQ96PX6 AC037471.2-201ENST00000564941 598 ntBASIC7.26□□□□□ -1.25
CCDC85AQ96PX6 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC7.26□□□□□ -1.25
CCDC85AQ96PX6 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC7.26□□□□□ -1.25
CCDC85AQ96PX6 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC7.26□□□□□ -1.25
CCDC85AQ96PX6 MIR3176-201ENST00000582210 90 ntBASIC7.26□□□□□ -1.25
CCDC85AQ96PX6 AC022916.3-201ENST00000592961 742 ntBASIC7.26□□□□□ -1.25
CCDC85AQ96PX6 AL136363.1-201ENST00000605349 337 ntBASIC7.26□□□□□ -1.25
CCDC85AQ96PX6 COX6CP4-201ENST00000605798 228 ntBASIC7.26□□□□□ -1.25
CCDC85AQ96PX6 AC011816.2-201ENST00000607089 556 ntBASIC7.26□□□□□ -1.25
CCDC85AQ96PX6 BX323046.1-201ENST00000610145 535 ntBASIC7.26□□□□□ -1.25
CCDC85AQ96PX6 AC093838.1-201ENST00000613014 469 ntBASIC7.26□□□□□ -1.25
CCDC85AQ96PX6 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CCDC85AQ96PX6 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CCDC85AQ96PX6 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CCDC85AQ96PX6 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CCDC85AQ96PX6 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CCDC85AQ96PX6 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CCDC85AQ96PX6 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC7.26□□□□□ -1.25
CCDC85AQ96PX6 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CCDC85AQ96PX6 AC006511.3-201ENST00000624929 1783 ntBASIC7.25□□□□□ -1.25
CCDC85AQ96PX6 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CCDC85AQ96PX6 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC7.25□□□□□ -1.25
CCDC85AQ96PX6 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms