Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 RPL36AP13-201ENST00000457490 317 ntBASIC4.25□□□□□ -1.73
RPRD1AQ96P16 RPL29P14-201ENST00000495837 428 ntBASIC4.25□□□□□ -1.73
RPRD1AQ96P16 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.25□□□□□ -1.73
RPRD1AQ96P16 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.25□□□□□ -1.73
RPRD1AQ96P16 AC020593.1-201ENST00000507399 299 ntBASIC4.25□□□□□ -1.73
RPRD1AQ96P16 PPBPP1-201ENST00000510807 373 ntBASIC4.25□□□□□ -1.73
RPRD1AQ96P16 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.25□□□□□ -1.73
RPRD1AQ96P16 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.25□□□□□ -1.73
RPRD1AQ96P16 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.25□□□□□ -1.73
RPRD1AQ96P16 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.25□□□□□ -1.73
RPRD1AQ96P16 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.25□□□□□ -1.73
RPRD1AQ96P16 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.25□□□□□ -1.73
RPRD1AQ96P16 AC007224.1-201ENST00000564410 144 ntBASIC4.25□□□□□ -1.73
RPRD1AQ96P16 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.25□□□□□ -1.73
RPRD1AQ96P16 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.25□□□□□ -1.73
RPRD1AQ96P16 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.25□□□□□ -1.73
RPRD1AQ96P16 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.25□□□□□ -1.73
RPRD1AQ96P16 RNU4-89P-201ENST00000607443 133 ntBASIC4.25□□□□□ -1.73
RPRD1AQ96P16 AC064801.1-201ENST00000612025 407 ntBASIC4.25□□□□□ -1.73
RPRD1AQ96P16 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.25□□□□□ -1.73
RPRD1AQ96P16 MIR4727-201ENST00000622232 55 ntBASIC4.25□□□□□ -1.73
RPRD1AQ96P16 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RPRD1AQ96P16 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RPRD1AQ96P16 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
RPRD1AQ96P16 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
RPRD1AQ96P16 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
RPRD1AQ96P16 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RPRD1AQ96P16 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.24□□□□□ -1.73
RPRD1AQ96P16 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.24□□□□□ -1.73
RPRD1AQ96P16 AC090229.1-201ENST00000590983 1609 ntBASIC4.24□□□□□ -1.73
RPRD1AQ96P16 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.24□□□□□ -1.73
RPRD1AQ96P16 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.24□□□□□ -1.73
RPRD1AQ96P16 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
RPRD1AQ96P16 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
RPRD1AQ96P16 SPRR2C-201ENST00000290702 219 ntBASIC4.24□□□□□ -1.73
RPRD1AQ96P16 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.24□□□□□ -1.73
RPRD1AQ96P16 RNU1-13P-201ENST00000384499 162 ntBASIC4.24□□□□□ -1.73
RPRD1AQ96P16 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.24□□□□□ -1.73
RPRD1AQ96P16 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.24□□□□□ -1.73
RPRD1AQ96P16 AL356095.1-201ENST00000417217 199 ntBASIC4.24□□□□□ -1.73
RPRD1AQ96P16 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.24□□□□□ -1.73
RPRD1AQ96P16 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.24□□□□□ -1.73
RPRD1AQ96P16 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.24□□□□□ -1.73
RPRD1AQ96P16 AC023512.1-201ENST00000444513 499 ntBASIC4.24□□□□□ -1.73
RPRD1AQ96P16 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.24□□□□□ -1.73
RPRD1AQ96P16 AL451050.1-201ENST00000450126 415 ntBASIC4.24□□□□□ -1.73
RPRD1AQ96P16 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.24□□□□□ -1.73
RPRD1AQ96P16 RPL7P1-201ENST00000468161 747 ntBASIC4.24□□□□□ -1.73
RPRD1AQ96P16 RPL7P9-201ENST00000468715 747 ntBASIC4.24□□□□□ -1.73
RPRD1AQ96P16 AC093770.1-201ENST00000511559 571 ntBASIC4.24□□□□□ -1.73
RPRD1AQ96P16 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.24□□□□□ -1.73
RPRD1AQ96P16 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.24□□□□□ -1.73
RPRD1AQ96P16 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.24□□□□□ -1.73
RPRD1AQ96P16 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.24□□□□□ -1.73
RPRD1AQ96P16 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.24□□□□□ -1.73
RPRD1AQ96P16 CBX3P5-201ENST00000552017 521 ntBASIC4.24□□□□□ -1.73
RPRD1AQ96P16 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.24□□□□□ -1.73
RPRD1AQ96P16 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.24□□□□□ -1.73
RPRD1AQ96P16 CYP4A43P-201ENST00000568156 121 ntBASIC4.24□□□□□ -1.73
RPRD1AQ96P16 RPL23AP87-202ENST00000573039 466 ntBASIC4.24□□□□□ -1.73
RPRD1AQ96P16 AC245128.3-201ENST00000594721 748 ntBASIC4.24□□□□□ -1.73
RPRD1AQ96P16 AL451044.1-201ENST00000604867 238 ntBASIC4.24□□□□□ -1.73
RPRD1AQ96P16 MIR432-201ENST00000606207 94 ntBASIC4.24□□□□□ -1.73
RPRD1AQ96P16 MIR6867-201ENST00000610636 67 ntBASIC4.24□□□□□ -1.73
RPRD1AQ96P16 uc_338.32-201ENST00000615087 172 ntBASIC4.24□□□□□ -1.73
RPRD1AQ96P16 AC090246.1-201ENST00000616499 426 ntBASIC4.24□□□□□ -1.73
RPRD1AQ96P16 MIR7151-201ENST00000617477 60 ntBASIC4.24□□□□□ -1.73
RPRD1AQ96P16 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.24□□□□□ -1.73
RPRD1AQ96P16 MIR7154-201ENST00000620673 73 ntBASIC4.24□□□□□ -1.73
RPRD1AQ96P16 AC068724.3-201ENST00000625906 87 ntBASIC4.24□□□□□ -1.73
RPRD1AQ96P16 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
RPRD1AQ96P16 ERCC6-202ENST00000374127 1782 ntBASIC4.24□□□□□ -1.73
RPRD1AQ96P16 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RPRD1AQ96P16 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.24□□□□□ -1.73
RPRD1AQ96P16 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RPRD1AQ96P16 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RPRD1AQ96P16 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.23□□□□□ -1.73
RPRD1AQ96P16 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RPRD1AQ96P16 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
RPRD1AQ96P16 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RPRD1AQ96P16 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
RPRD1AQ96P16 SNORA60-201ENST00000362396 134 ntBASIC4.23□□□□□ -1.73
RPRD1AQ96P16 RNA5SP498-201ENST00000411342 120 ntBASIC4.23□□□□□ -1.73
RPRD1AQ96P16 HSPE1P12-201ENST00000412576 301 ntBASIC4.23□□□□□ -1.73
RPRD1AQ96P16 OR8G2P-201ENST00000412796 908 ntBASIC4.23□□□□□ -1.73
RPRD1AQ96P16 AL445528.1-201ENST00000426330 420 ntBASIC4.23□□□□□ -1.73
RPRD1AQ96P16 NPM1P24-201ENST00000428039 894 ntBASIC4.23□□□□□ -1.73
RPRD1AQ96P16 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.23□□□□□ -1.73
RPRD1AQ96P16 OR4C10P-201ENST00000434991 931 ntBASIC4.23□□□□□ -1.73
RPRD1AQ96P16 AL356276.2-201ENST00000435919 558 ntBASIC4.23□□□□□ -1.73
RPRD1AQ96P16 RPS4XP4-201ENST00000443195 763 ntBASIC4.23□□□□□ -1.73
RPRD1AQ96P16 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.23□□□□□ -1.73
RPRD1AQ96P16 RNU6-775P-201ENST00000459318 96 ntBASIC4.23□□□□□ -1.73
RPRD1AQ96P16 AC108043.1-201ENST00000512696 574 ntBASIC4.23□□□□□ -1.73
RPRD1AQ96P16 AC108120.2-201ENST00000512973 294 ntBASIC4.23□□□□□ -1.73
RPRD1AQ96P16 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.23□□□□□ -1.73
RPRD1AQ96P16 RNU6-751P-201ENST00000516382 101 ntBASIC4.23□□□□□ -1.73
RPRD1AQ96P16 RNU6-1004P-201ENST00000516584 111 ntBASIC4.23□□□□□ -1.73
RPRD1AQ96P16 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.23□□□□□ -1.73
RPRD1AQ96P16 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms