Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 BX119904.1-201ENST00000432026 348 ntBASIC4.53□□□□□ -1.68
NECTIN4Q96NY8 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.53□□□□□ -1.68
NECTIN4Q96NY8 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.53□□□□□ -1.68
NECTIN4Q96NY8 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC4.53□□□□□ -1.68
NECTIN4Q96NY8 VN1R32P-201ENST00000452234 905 ntBASIC4.53□□□□□ -1.68
NECTIN4Q96NY8 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.53□□□□□ -1.68
NECTIN4Q96NY8 ATP1B1P1-201ENST00000509767 915 ntBASIC4.53□□□□□ -1.68
NECTIN4Q96NY8 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.53□□□□□ -1.68
NECTIN4Q96NY8 PDCD5P1-201ENST00000543528 309 ntBASIC4.53□□□□□ -1.68
NECTIN4Q96NY8 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.53□□□□□ -1.68
NECTIN4Q96NY8 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.53□□□□□ -1.68
NECTIN4Q96NY8 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC4.53□□□□□ -1.68
NECTIN4Q96NY8 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC4.53□□□□□ -1.68
NECTIN4Q96NY8 AC011458.1-201ENST00000604034 617 ntBASIC4.53□□□□□ -1.68
NECTIN4Q96NY8 BNIP3P31-201ENST00000604515 566 ntBASIC4.53□□□□□ -1.68
NECTIN4Q96NY8 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.53□□□□□ -1.68
NECTIN4Q96NY8 AP001033.2-201ENST00000609701 1003 ntBASIC4.53□□□□□ -1.68
NECTIN4Q96NY8 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.53□□□□□ -1.68
NECTIN4Q96NY8 AC007546.1-201ENST00000619452 559 ntBASIC4.53□□□□□ -1.68
NECTIN4Q96NY8 FRG1DP-201ENST00000635586 771 ntBASIC4.53□□□□□ -1.68
NECTIN4Q96NY8 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
NECTIN4Q96NY8 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.53□□□□□ -1.68
NECTIN4Q96NY8 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.53□□□□□ -1.68
NECTIN4Q96NY8 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
NECTIN4Q96NY8 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
NECTIN4Q96NY8 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
NECTIN4Q96NY8 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
NECTIN4Q96NY8 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
NECTIN4Q96NY8 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.53□□□□□ -1.69
NECTIN4Q96NY8 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.52□□□□□ -1.69
NECTIN4Q96NY8 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
NECTIN4Q96NY8 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
NECTIN4Q96NY8 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
NECTIN4Q96NY8 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
NECTIN4Q96NY8 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
NECTIN4Q96NY8 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
NECTIN4Q96NY8 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
NECTIN4Q96NY8 RNA5SP175-201ENST00000364275 119 ntBASIC4.52□□□□□ -1.69
NECTIN4Q96NY8 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
NECTIN4Q96NY8 MIR449B-201ENST00000384995 97 ntBASIC4.52□□□□□ -1.69
NECTIN4Q96NY8 TAF9BP2-201ENST00000400856 499 ntBASIC4.52□□□□□ -1.69
NECTIN4Q96NY8 MFSD13B-201ENST00000420133 1290 ntBASIC4.52□□□□□ -1.69
NECTIN4Q96NY8 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.52□□□□□ -1.69
NECTIN4Q96NY8 MTCO2P1-201ENST00000424648 477 ntBASIC4.52□□□□□ -1.69
NECTIN4Q96NY8 CKS1BP6-201ENST00000424932 240 ntBASIC4.52□□□□□ -1.69
NECTIN4Q96NY8 OR8F1P-201ENST00000425243 930 ntBASIC4.52□□□□□ -1.69
NECTIN4Q96NY8 AL157831.1-201ENST00000426134 473 ntBASIC4.52□□□□□ -1.69
NECTIN4Q96NY8 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC4.52□□□□□ -1.69
NECTIN4Q96NY8 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.52□□□□□ -1.69
NECTIN4Q96NY8 AL512661.1-201ENST00000434586 1253 ntBASIC4.52□□□□□ -1.69
NECTIN4Q96NY8 AL357520.1-201ENST00000441557 453 ntBASIC4.52□□□□□ -1.69
NECTIN4Q96NY8 RNFT1P2-201ENST00000443064 757 ntBASIC4.52□□□□□ -1.69
NECTIN4Q96NY8 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
NECTIN4Q96NY8 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC4.52□□□□□ -1.69
NECTIN4Q96NY8 RPL23AP2-201ENST00000471227 466 ntBASIC4.52□□□□□ -1.69
NECTIN4Q96NY8 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC4.52□□□□□ -1.69
NECTIN4Q96NY8 C1GALT1P2-201ENST00000510813 1104 ntBASIC4.52□□□□□ -1.69
NECTIN4Q96NY8 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.52□□□□□ -1.69
NECTIN4Q96NY8 IFITM8P-201ENST00000522529 394 ntBASIC4.52□□□□□ -1.69
NECTIN4Q96NY8 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC4.52□□□□□ -1.69
NECTIN4Q96NY8 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC4.52□□□□□ -1.69
NECTIN4Q96NY8 UBTFL9-201ENST00000534504 1148 ntBASIC4.52□□□□□ -1.69
NECTIN4Q96NY8 OSBPL9P3-201ENST00000534523 595 ntBASIC4.52□□□□□ -1.69
NECTIN4Q96NY8 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC4.52□□□□□ -1.69
NECTIN4Q96NY8 AC093510.2-201ENST00000562820 896 ntBASIC4.52□□□□□ -1.69
NECTIN4Q96NY8 MIR4716-201ENST00000579628 84 ntBASIC4.52□□□□□ -1.69
NECTIN4Q96NY8 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC4.52□□□□□ -1.69
NECTIN4Q96NY8 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC4.52□□□□□ -1.69
NECTIN4Q96NY8 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.52□□□□□ -1.69
NECTIN4Q96NY8 AC133794.1-201ENST00000602731 914 ntBASIC4.52□□□□□ -1.69
NECTIN4Q96NY8 AC105148.1-201ENST00000604961 409 ntBASIC4.52□□□□□ -1.69
NECTIN4Q96NY8 AC090525.3-201ENST00000605601 189 ntBASIC4.52□□□□□ -1.69
NECTIN4Q96NY8 AL139022.2-201ENST00000606934 443 ntBASIC4.52□□□□□ -1.69
NECTIN4Q96NY8 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.52□□□□□ -1.69
NECTIN4Q96NY8 AL021997.2-201ENST00000615674 271 ntBASIC4.52□□□□□ -1.69
NECTIN4Q96NY8 AC123768.4-201ENST00000616244 701 ntBASIC4.52□□□□□ -1.69
NECTIN4Q96NY8 AC099669.2-201ENST00000616549 437 ntBASIC4.52□□□□□ -1.69
NECTIN4Q96NY8 AL049777.1-201ENST00000622740 518 ntBASIC4.52□□□□□ -1.69
NECTIN4Q96NY8 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.52□□□□□ -1.69
NECTIN4Q96NY8 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.52□□□□□ -1.69
NECTIN4Q96NY8 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.52□□□□□ -1.69
NECTIN4Q96NY8 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
NECTIN4Q96NY8 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
NECTIN4Q96NY8 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
NECTIN4Q96NY8 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.52□□□□□ -1.69
NECTIN4Q96NY8 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
NECTIN4Q96NY8 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
NECTIN4Q96NY8 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
NECTIN4Q96NY8 RLIMP1-201ENST00000339626 1680 ntBASIC4.51□□□□□ -1.69
NECTIN4Q96NY8 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.51□□□□□ -1.69
NECTIN4Q96NY8 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
NECTIN4Q96NY8 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
NECTIN4Q96NY8 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.51□□□□□ -1.69
NECTIN4Q96NY8 AL355143.1-201ENST00000407101 841 ntBASIC4.51□□□□□ -1.69
NECTIN4Q96NY8 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.51□□□□□ -1.69
NECTIN4Q96NY8 AP000357.1-201ENST00000409926 1165 ntBASIC4.51□□□□□ -1.69
NECTIN4Q96NY8 RN7SKP235-201ENST00000410662 305 ntBASIC4.51□□□□□ -1.69
NECTIN4Q96NY8 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.51□□□□□ -1.69
NECTIN4Q96NY8 EIF1P3-201ENST00000423841 334 ntBASIC4.51□□□□□ -1.69
NECTIN4Q96NY8 AC018644.1-201ENST00000429934 551 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms