Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.11□□□□□ -1.75
C9orf72Q96LT7 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.11□□□□□ -1.75
C9orf72Q96LT7 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
C9orf72Q96LT7 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
C9orf72Q96LT7 IPO8P1-201ENST00000455509 3109 ntBASIC4.1□□□□□ -1.75
C9orf72Q96LT7 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
C9orf72Q96LT7 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
C9orf72Q96LT7 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
C9orf72Q96LT7 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
C9orf72Q96LT7 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.1□□□□□ -1.75
C9orf72Q96LT7 SPRR2C-201ENST00000290702 219 ntBASIC4.1□□□□□ -1.75
C9orf72Q96LT7 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
C9orf72Q96LT7 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
C9orf72Q96LT7 SNORA11-201ENST00000408789 128 ntBASIC4.1□□□□□ -1.75
C9orf72Q96LT7 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.1□□□□□ -1.75
C9orf72Q96LT7 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
C9orf72Q96LT7 KCTD9P3-201ENST00000434597 1169 ntBASIC4.1□□□□□ -1.75
C9orf72Q96LT7 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.1□□□□□ -1.75
C9orf72Q96LT7 HMGN1P8-201ENST00000463578 288 ntBASIC4.1□□□□□ -1.75
C9orf72Q96LT7 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.1□□□□□ -1.75
C9orf72Q96LT7 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.1□□□□□ -1.75
C9orf72Q96LT7 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.1□□□□□ -1.75
C9orf72Q96LT7 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.1□□□□□ -1.75
C9orf72Q96LT7 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC4.1□□□□□ -1.75
C9orf72Q96LT7 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.1□□□□□ -1.75
C9orf72Q96LT7 AC026402.1-201ENST00000513642 170 ntBASIC4.1□□□□□ -1.75
C9orf72Q96LT7 AC099522.1-202ENST00000514718 367 ntBASIC4.1□□□□□ -1.75
C9orf72Q96LT7 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
C9orf72Q96LT7 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.1□□□□□ -1.75
C9orf72Q96LT7 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.1□□□□□ -1.75
C9orf72Q96LT7 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.1□□□□□ -1.75
C9orf72Q96LT7 AC135001.1-201ENST00000544546 283 ntBASIC4.1□□□□□ -1.75
C9orf72Q96LT7 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.1□□□□□ -1.75
C9orf72Q96LT7 AC084757.1-201ENST00000559987 490 ntBASIC4.1□□□□□ -1.75
C9orf72Q96LT7 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.1□□□□□ -1.75
C9orf72Q96LT7 RN7SL600P-201ENST00000581811 299 ntBASIC4.1□□□□□ -1.75
C9orf72Q96LT7 MIR5684-201ENST00000585074 65 ntBASIC4.1□□□□□ -1.75
C9orf72Q96LT7 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
C9orf72Q96LT7 MTCO2P22-201ENST00000603246 681 ntBASIC4.1□□□□□ -1.75
C9orf72Q96LT7 PSMA6P4-201ENST00000603247 718 ntBASIC4.1□□□□□ -1.75
C9orf72Q96LT7 AL591424.2-201ENST00000617023 128 ntBASIC4.1□□□□□ -1.75
C9orf72Q96LT7 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.1□□□□□ -1.75
C9orf72Q96LT7 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.1□□□□□ -1.75
C9orf72Q96LT7 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
C9orf72Q96LT7 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
C9orf72Q96LT7 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
C9orf72Q96LT7 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.1□□□□□ -1.75
C9orf72Q96LT7 AC027287.1-201ENST00000553115 1453 ntBASIC4.1□□□□□ -1.75
C9orf72Q96LT7 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.1□□□□□ -1.75
C9orf72Q96LT7 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.09□□□□□ -1.75
C9orf72Q96LT7 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.09□□□□□ -1.75
C9orf72Q96LT7 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.09□□□□□ -1.75
C9orf72Q96LT7 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
C9orf72Q96LT7 UBE3AP2-201ENST00000429033 2259 ntBASIC4.09□□□□□ -1.75
C9orf72Q96LT7 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.09□□□□□ -1.75
C9orf72Q96LT7 RN7SKP56-201ENST00000410513 331 ntBASIC4.09□□□□□ -1.75
C9orf72Q96LT7 MTCO3P21-201ENST00000430791 643 ntBASIC4.09□□□□□ -1.75
C9orf72Q96LT7 MTCO1P45-201ENST00000431457 267 ntBASIC4.09□□□□□ -1.75
C9orf72Q96LT7 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.09□□□□□ -1.75
C9orf72Q96LT7 ATP5HP2-201ENST00000433885 485 ntBASIC4.09□□□□□ -1.75
C9orf72Q96LT7 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.09□□□□□ -1.75
C9orf72Q96LT7 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.09□□□□□ -1.75
C9orf72Q96LT7 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.09□□□□□ -1.75
C9orf72Q96LT7 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.09□□□□□ -1.75
C9orf72Q96LT7 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.09□□□□□ -1.75
C9orf72Q96LT7 RNA5SP246-201ENST00000458909 119 ntBASIC4.09□□□□□ -1.75
C9orf72Q96LT7 RNU6-1218P-201ENST00000458990 108 ntBASIC4.09□□□□□ -1.75
C9orf72Q96LT7 RPL5P13-201ENST00000462840 709 ntBASIC4.09□□□□□ -1.75
C9orf72Q96LT7 AC104629.2-201ENST00000468627 598 ntBASIC4.09□□□□□ -1.75
C9orf72Q96LT7 S100A11P1-201ENST00000477525 312 ntBASIC4.09□□□□□ -1.75
C9orf72Q96LT7 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.09□□□□□ -1.75
C9orf72Q96LT7 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
C9orf72Q96LT7 BTF3L4P4-201ENST00000506381 449 ntBASIC4.09□□□□□ -1.75
C9orf72Q96LT7 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.09□□□□□ -1.75
C9orf72Q96LT7 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
C9orf72Q96LT7 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.09□□□□□ -1.75
C9orf72Q96LT7 AC025627.2-201ENST00000576220 160 ntBASIC4.09□□□□□ -1.75
C9orf72Q96LT7 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.09□□□□□ -1.75
C9orf72Q96LT7 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.09□□□□□ -1.75
C9orf72Q96LT7 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.09□□□□□ -1.75
C9orf72Q96LT7 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.09□□□□□ -1.75
C9orf72Q96LT7 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.09□□□□□ -1.75
C9orf72Q96LT7 AL645927.2-201ENST00000618350 349 ntBASIC4.09□□□□□ -1.75
C9orf72Q96LT7 AC112484.5-201ENST00000624189 228 ntBASIC4.09□□□□□ -1.75
C9orf72Q96LT7 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
C9orf72Q96LT7 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
C9orf72Q96LT7 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
C9orf72Q96LT7 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
C9orf72Q96LT7 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
C9orf72Q96LT7 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.09□□□□□ -1.75
C9orf72Q96LT7 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
C9orf72Q96LT7 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
C9orf72Q96LT7 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
C9orf72Q96LT7 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
C9orf72Q96LT7 MIR92A2-201ENST00000385299 75 ntBASIC4.08□□□□□ -1.76
C9orf72Q96LT7 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
C9orf72Q96LT7 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
C9orf72Q96LT7 MIR1251-201ENST00000408552 70 ntBASIC4.08□□□□□ -1.76
C9orf72Q96LT7 RN7SKP33-201ENST00000410942 340 ntBASIC4.08□□□□□ -1.76
C9orf72Q96LT7 AL356095.1-201ENST00000417217 199 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms