Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC3.33□□□□□ -1.88
RTN4IP1Q8WWV3 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.33□□□□□ -1.88
RTN4IP1Q8WWV3 AC117525.1-201ENST00000515228 503 ntBASIC3.33□□□□□ -1.88
RTN4IP1Q8WWV3 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC3.33□□□□□ -1.88
RTN4IP1Q8WWV3 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RTN4IP1Q8WWV3 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC3.33□□□□□ -1.88
RTN4IP1Q8WWV3 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.33□□□□□ -1.88
RTN4IP1Q8WWV3 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.33□□□□□ -1.88
RTN4IP1Q8WWV3 KPNA2P3-201ENST00000584190 848 ntBASIC3.33□□□□□ -1.88
RTN4IP1Q8WWV3 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC3.33□□□□□ -1.88
RTN4IP1Q8WWV3 AC011477.5-201ENST00000586571 259 ntBASIC3.33□□□□□ -1.88
RTN4IP1Q8WWV3 AC006116.5-201ENST00000591936 559 ntBASIC3.33□□□□□ -1.88
RTN4IP1Q8WWV3 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC3.33□□□□□ -1.88
RTN4IP1Q8WWV3 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RTN4IP1Q8WWV3 AC034236.3-201ENST00000605999 461 ntBASIC3.33□□□□□ -1.88
RTN4IP1Q8WWV3 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.33□□□□□ -1.88
RTN4IP1Q8WWV3 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC3.33□□□□□ -1.88
RTN4IP1Q8WWV3 AC019131.2-201ENST00000609071 870 ntBASIC3.33□□□□□ -1.88
RTN4IP1Q8WWV3 AL445423.1-201ENST00000609941 536 ntBASIC3.33□□□□□ -1.88
RTN4IP1Q8WWV3 AL136295.6-201ENST00000610486 658 ntBASIC3.33□□□□□ -1.88
RTN4IP1Q8WWV3 uc_338.32-201ENST00000615087 172 ntBASIC3.33□□□□□ -1.88
RTN4IP1Q8WWV3 MLECP1-201ENST00000615893 709 ntBASIC3.33□□□□□ -1.88
RTN4IP1Q8WWV3 AL445567.2-201ENST00000618935 498 ntBASIC3.33□□□□□ -1.88
RTN4IP1Q8WWV3 AC124312.6-202ENST00000623624 418 ntBASIC3.33□□□□□ -1.88
RTN4IP1Q8WWV3 AC244205.2-202ENST00000635781 342 ntBASIC3.33□□□□□ -1.88
RTN4IP1Q8WWV3 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC3.33□□□□□ -1.88
RTN4IP1Q8WWV3 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.33□□□□□ -1.88
RTN4IP1Q8WWV3 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.33□□□□□ -1.88
RTN4IP1Q8WWV3 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RTN4IP1Q8WWV3 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
RTN4IP1Q8WWV3 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RTN4IP1Q8WWV3 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
RTN4IP1Q8WWV3 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.32□□□□□ -1.88
RTN4IP1Q8WWV3 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
RTN4IP1Q8WWV3 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.32□□□□□ -1.88
RTN4IP1Q8WWV3 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RTN4IP1Q8WWV3 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.32□□□□□ -1.88
RTN4IP1Q8WWV3 SNORA60-201ENST00000362396 134 ntBASIC3.32□□□□□ -1.88
RTN4IP1Q8WWV3 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RTN4IP1Q8WWV3 ST13P16-201ENST00000401760 781 ntBASIC3.32□□□□□ -1.88
RTN4IP1Q8WWV3 RNA5SP239-201ENST00000410218 129 ntBASIC3.32□□□□□ -1.88
RTN4IP1Q8WWV3 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC3.32□□□□□ -1.88
RTN4IP1Q8WWV3 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.32□□□□□ -1.88
RTN4IP1Q8WWV3 COX6CP15-201ENST00000426313 211 ntBASIC3.32□□□□□ -1.88
RTN4IP1Q8WWV3 AL358472.1-201ENST00000431295 329 ntBASIC3.32□□□□□ -1.88
RTN4IP1Q8WWV3 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.32□□□□□ -1.88
RTN4IP1Q8WWV3 AC093716.1-201ENST00000435923 377 ntBASIC3.32□□□□□ -1.88
RTN4IP1Q8WWV3 Z99127.2-201ENST00000441426 334 ntBASIC3.32□□□□□ -1.88
RTN4IP1Q8WWV3 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.32□□□□□ -1.88
RTN4IP1Q8WWV3 NUTF2P3-201ENST00000448540 384 ntBASIC3.32□□□□□ -1.88
RTN4IP1Q8WWV3 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.32□□□□□ -1.88
RTN4IP1Q8WWV3 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC3.32□□□□□ -1.88
RTN4IP1Q8WWV3 FABP3P2-201ENST00000453169 399 ntBASIC3.32□□□□□ -1.88
RTN4IP1Q8WWV3 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.32□□□□□ -1.88
RTN4IP1Q8WWV3 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC3.32□□□□□ -1.88
RTN4IP1Q8WWV3 RPL38P1-201ENST00000460914 211 ntBASIC3.32□□□□□ -1.88
RTN4IP1Q8WWV3 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC3.32□□□□□ -1.88
RTN4IP1Q8WWV3 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.32□□□□□ -1.88
RTN4IP1Q8WWV3 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.32□□□□□ -1.88
RTN4IP1Q8WWV3 AC108471.1-201ENST00000513977 287 ntBASIC3.32□□□□□ -1.88
RTN4IP1Q8WWV3 SNORA70.17-201ENST00000516449 133 ntBASIC3.32□□□□□ -1.88
RTN4IP1Q8WWV3 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC3.32□□□□□ -1.88
RTN4IP1Q8WWV3 AC138701.1-201ENST00000524329 714 ntBASIC3.32□□□□□ -1.88
RTN4IP1Q8WWV3 EIF4A2P3-201ENST00000525903 1055 ntBASIC3.32□□□□□ -1.88
RTN4IP1Q8WWV3 OR7E10P-201ENST00000526420 991 ntBASIC3.32□□□□□ -1.88
RTN4IP1Q8WWV3 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.32□□□□□ -1.88
RTN4IP1Q8WWV3 AC087888.1-201ENST00000550884 1254 ntBASIC3.32□□□□□ -1.88
RTN4IP1Q8WWV3 AC025627.2-201ENST00000576220 160 ntBASIC3.32□□□□□ -1.88
RTN4IP1Q8WWV3 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.32□□□□□ -1.88
RTN4IP1Q8WWV3 MIR5684-201ENST00000585074 65 ntBASIC3.32□□□□□ -1.88
RTN4IP1Q8WWV3 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC3.32□□□□□ -1.88
RTN4IP1Q8WWV3 AF230666.2-201ENST00000602328 725 ntBASIC3.32□□□□□ -1.88
RTN4IP1Q8WWV3 AC110741.2-201ENST00000605278 268 ntBASIC3.32□□□□□ -1.88
RTN4IP1Q8WWV3 MIR6748-201ENST00000610433 71 ntBASIC3.32□□□□□ -1.88
RTN4IP1Q8WWV3 AC005962.2-201ENST00000611427 652 ntBASIC3.32□□□□□ -1.88
RTN4IP1Q8WWV3 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC3.32□□□□□ -1.88
RTN4IP1Q8WWV3 AL133370.2-201ENST00000619934 439 ntBASIC3.32□□□□□ -1.88
RTN4IP1Q8WWV3 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC3.32□□□□□ -1.88
RTN4IP1Q8WWV3 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC3.32□□□□□ -1.88
RTN4IP1Q8WWV3 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RTN4IP1Q8WWV3 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.32□□□□□ -1.88
RTN4IP1Q8WWV3 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
RTN4IP1Q8WWV3 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.32□□□□□ -1.88
RTN4IP1Q8WWV3 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
RTN4IP1Q8WWV3 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RTN4IP1Q8WWV3 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
RTN4IP1Q8WWV3 AC007529.1-201ENST00000418574 2178 ntBASIC3.31□□□□□ -1.88
RTN4IP1Q8WWV3 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.31□□□□□ -1.88
RTN4IP1Q8WWV3 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.31□□□□□ -1.88
RTN4IP1Q8WWV3 RNU6-225P-201ENST00000384613 103 ntBASIC3.31□□□□□ -1.88
RTN4IP1Q8WWV3 AL034403.1-201ENST00000399414 885 ntBASIC3.31□□□□□ -1.88
RTN4IP1Q8WWV3 RPS27AP11-201ENST00000402798 447 ntBASIC3.31□□□□□ -1.88
RTN4IP1Q8WWV3 AL138878.1-201ENST00000405131 347 ntBASIC3.31□□□□□ -1.88
RTN4IP1Q8WWV3 MIR1183-201ENST00000408856 89 ntBASIC3.31□□□□□ -1.88
RTN4IP1Q8WWV3 RN7SKP33-201ENST00000410942 340 ntBASIC3.31□□□□□ -1.88
RTN4IP1Q8WWV3 AC073464.3-201ENST00000422564 712 ntBASIC3.31□□□□□ -1.88
RTN4IP1Q8WWV3 OR6K4P-201ENST00000423179 955 ntBASIC3.31□□□□□ -1.88
RTN4IP1Q8WWV3 FTH1P6-201ENST00000430768 320 ntBASIC3.31□□□□□ -1.88
RTN4IP1Q8WWV3 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC3.31□□□□□ -1.88
RTN4IP1Q8WWV3 EXTL2P1-201ENST00000446218 416 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms