Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
ZNF439Q8NDP4 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
ZNF439Q8NDP4 SEPT7P7-201ENST00000420492 1301 ntBASIC3.28□□□□□ -1.88
ZNF439Q8NDP4 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
ZNF439Q8NDP4 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.28□□□□□ -1.88
ZNF439Q8NDP4 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
ZNF439Q8NDP4 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
ZNF439Q8NDP4 MIR423-201ENST00000362201 94 ntBASIC3.28□□□□□ -1.88
ZNF439Q8NDP4 ENSAP1-201ENST00000392855 326 ntBASIC3.28□□□□□ -1.88
ZNF439Q8NDP4 MIR1251-201ENST00000408552 70 ntBASIC3.28□□□□□ -1.88
ZNF439Q8NDP4 OR8G2P-201ENST00000412796 908 ntBASIC3.28□□□□□ -1.88
ZNF439Q8NDP4 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.28□□□□□ -1.88
ZNF439Q8NDP4 AL807761.1-201ENST00000417622 171 ntBASIC3.28□□□□□ -1.88
ZNF439Q8NDP4 PTP4A1P5-201ENST00000420305 455 ntBASIC3.28□□□□□ -1.88
ZNF439Q8NDP4 FAR2P4-202ENST00000425399 584 ntBASIC3.28□□□□□ -1.88
ZNF439Q8NDP4 OR5BE1P-201ENST00000425977 939 ntBASIC3.28□□□□□ -1.88
ZNF439Q8NDP4 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.28□□□□□ -1.88
ZNF439Q8NDP4 AC016712.1-201ENST00000431088 378 ntBASIC3.28□□□□□ -1.88
ZNF439Q8NDP4 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.28□□□□□ -1.88
ZNF439Q8NDP4 AC083863.1-201ENST00000438811 231 ntBASIC3.28□□□□□ -1.88
ZNF439Q8NDP4 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.28□□□□□ -1.88
ZNF439Q8NDP4 SNORD108-201ENST00000459332 71 ntBASIC3.28□□□□□ -1.88
ZNF439Q8NDP4 PPIAP15-201ENST00000479662 484 ntBASIC3.28□□□□□ -1.88
ZNF439Q8NDP4 AC069499.1-201ENST00000489433 509 ntBASIC3.28□□□□□ -1.88
ZNF439Q8NDP4 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.28□□□□□ -1.88
ZNF439Q8NDP4 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.28□□□□□ -1.88
ZNF439Q8NDP4 MRPL49P2-201ENST00000521066 465 ntBASIC3.28□□□□□ -1.88
ZNF439Q8NDP4 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.28□□□□□ -1.88
ZNF439Q8NDP4 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.28□□□□□ -1.88
ZNF439Q8NDP4 MIR6868-201ENST00000611215 58 ntBASIC3.28□□□□□ -1.88
ZNF439Q8NDP4 AC005962.2-201ENST00000611427 652 ntBASIC3.28□□□□□ -1.88
ZNF439Q8NDP4 AC016957.2-201ENST00000616998 848 ntBASIC3.28□□□□□ -1.88
ZNF439Q8NDP4 AC145207.9-201ENST00000623802 325 ntBASIC3.28□□□□□ -1.88
ZNF439Q8NDP4 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.28□□□□□ -1.88
ZNF439Q8NDP4 OR5BE1P-202ENST00000641168 1176 ntBASIC3.28□□□□□ -1.88
ZNF439Q8NDP4 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.28□□□□□ -1.88
ZNF439Q8NDP4 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
ZNF439Q8NDP4 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
ZNF439Q8NDP4 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
ZNF439Q8NDP4 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.28□□□□□ -1.88
ZNF439Q8NDP4 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.28□□□□□ -1.88
ZNF439Q8NDP4 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
ZNF439Q8NDP4 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
ZNF439Q8NDP4 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.89
ZNF439Q8NDP4 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
ZNF439Q8NDP4 AL356317.1-201ENST00000396110 1436 ntBASIC3.27□□□□□ -1.89
ZNF439Q8NDP4 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
ZNF439Q8NDP4 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
ZNF439Q8NDP4 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC3.27□□□□□ -1.89
ZNF439Q8NDP4 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
ZNF439Q8NDP4 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
ZNF439Q8NDP4 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
ZNF439Q8NDP4 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.27□□□□□ -1.89
ZNF439Q8NDP4 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.27□□□□□ -1.89
ZNF439Q8NDP4 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
ZNF439Q8NDP4 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.27□□□□□ -1.89
ZNF439Q8NDP4 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.27□□□□□ -1.89
ZNF439Q8NDP4 AC115285.1-201ENST00000424879 736 ntBASIC3.27□□□□□ -1.89
ZNF439Q8NDP4 AC009965.2-201ENST00000425328 970 ntBASIC3.27□□□□□ -1.89
ZNF439Q8NDP4 USP12PY-201ENST00000427677 1064 ntBASIC3.27□□□□□ -1.89
ZNF439Q8NDP4 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.27□□□□□ -1.89
ZNF439Q8NDP4 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.27□□□□□ -1.89
ZNF439Q8NDP4 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.27□□□□□ -1.89
ZNF439Q8NDP4 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC3.27□□□□□ -1.89
ZNF439Q8NDP4 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
ZNF439Q8NDP4 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.27□□□□□ -1.89
ZNF439Q8NDP4 TVP23BP2-201ENST00000455082 615 ntBASIC3.27□□□□□ -1.89
ZNF439Q8NDP4 AL132838.2-201ENST00000492041 314 ntBASIC3.27□□□□□ -1.89
ZNF439Q8NDP4 RPL7P24-201ENST00000493052 752 ntBASIC3.27□□□□□ -1.89
ZNF439Q8NDP4 RNA5SP143-201ENST00000516936 115 ntBASIC3.27□□□□□ -1.89
ZNF439Q8NDP4 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.27□□□□□ -1.89
ZNF439Q8NDP4 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.27□□□□□ -1.89
ZNF439Q8NDP4 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.27□□□□□ -1.89
ZNF439Q8NDP4 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
ZNF439Q8NDP4 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.27□□□□□ -1.89
ZNF439Q8NDP4 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.27□□□□□ -1.89
ZNF439Q8NDP4 MIR3939-201ENST00000582614 106 ntBASIC3.27□□□□□ -1.89
ZNF439Q8NDP4 AC069366.1-201ENST00000583159 838 ntBASIC3.27□□□□□ -1.89
ZNF439Q8NDP4 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.27□□□□□ -1.89
ZNF439Q8NDP4 AL023583.1-201ENST00000607518 1143 ntBASIC3.27□□□□□ -1.89
ZNF439Q8NDP4 AC019131.2-201ENST00000609071 870 ntBASIC3.27□□□□□ -1.89
ZNF439Q8NDP4 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.27□□□□□ -1.89
ZNF439Q8NDP4 MIR486-1-201ENST00000612171 68 ntBASIC3.27□□□□□ -1.89
ZNF439Q8NDP4 MLECP1-201ENST00000615893 709 ntBASIC3.27□□□□□ -1.89
ZNF439Q8NDP4 AL391261.4-201ENST00000616012 481 ntBASIC3.27□□□□□ -1.89
ZNF439Q8NDP4 AC123768.4-201ENST00000616244 701 ntBASIC3.27□□□□□ -1.89
ZNF439Q8NDP4 AC099669.2-201ENST00000616549 437 ntBASIC3.27□□□□□ -1.89
ZNF439Q8NDP4 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
ZNF439Q8NDP4 AC124312.6-202ENST00000623624 418 ntBASIC3.27□□□□□ -1.89
ZNF439Q8NDP4 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.27□□□□□ -1.89
ZNF439Q8NDP4 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
ZNF439Q8NDP4 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
ZNF439Q8NDP4 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC3.27□□□□□ -1.89
ZNF439Q8NDP4 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
ZNF439Q8NDP4 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
ZNF439Q8NDP4 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
ZNF439Q8NDP4 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
ZNF439Q8NDP4 SYT14P1-202ENST00000600441 1448 ntBASIC3.27□□□□□ -1.89
ZNF439Q8NDP4 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
ZNF439Q8NDP4 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms