Protein–RNA interactions for Protein: Q8N4P3

HDDC3, Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3Q8N4P3 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.42□□□□□ -1.7
HDDC3Q8N4P3 FAR1P1-201ENST00000427163 934 ntBASIC4.42□□□□□ -1.7
HDDC3Q8N4P3 RPL23AP25-201ENST00000430973 463 ntBASIC4.42□□□□□ -1.7
HDDC3Q8N4P3 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.42□□□□□ -1.7
HDDC3Q8N4P3 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.42□□□□□ -1.7
HDDC3Q8N4P3 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
HDDC3Q8N4P3 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC4.42□□□□□ -1.7
HDDC3Q8N4P3 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
HDDC3Q8N4P3 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.42□□□□□ -1.7
HDDC3Q8N4P3 AC010374.1-201ENST00000503762 1237 ntBASIC4.42□□□□□ -1.7
HDDC3Q8N4P3 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.42□□□□□ -1.7
HDDC3Q8N4P3 SNORA67.7-201ENST00000516664 135 ntBASIC4.42□□□□□ -1.7
HDDC3Q8N4P3 RNU1-45P-201ENST00000517191 141 ntBASIC4.42□□□□□ -1.7
HDDC3Q8N4P3 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.42□□□□□ -1.7
HDDC3Q8N4P3 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.42□□□□□ -1.7
HDDC3Q8N4P3 OR5AK3P-201ENST00000527486 1297 ntBASIC4.42□□□□□ -1.7
HDDC3Q8N4P3 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.42□□□□□ -1.7
HDDC3Q8N4P3 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.42□□□□□ -1.7
HDDC3Q8N4P3 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HDDC3Q8N4P3 MIR4286-201ENST00000580651 93 ntBASIC4.42□□□□□ -1.7
HDDC3Q8N4P3 AP001180.3-201ENST00000582221 145 ntBASIC4.42□□□□□ -1.7
HDDC3Q8N4P3 MIR3158-1-201ENST00000583596 81 ntBASIC4.42□□□□□ -1.7
HDDC3Q8N4P3 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC4.42□□□□□ -1.7
HDDC3Q8N4P3 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.42□□□□□ -1.7
HDDC3Q8N4P3 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.42□□□□□ -1.7
HDDC3Q8N4P3 OR4H6P-202ENST00000603819 340 ntBASIC4.42□□□□□ -1.7
HDDC3Q8N4P3 AC010680.4-201ENST00000605334 543 ntBASIC4.42□□□□□ -1.7
HDDC3Q8N4P3 SNORD91B-202ENST00000608459 222 ntBASIC4.42□□□□□ -1.7
HDDC3Q8N4P3 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.42□□□□□ -1.7
HDDC3Q8N4P3 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HDDC3Q8N4P3 AC091905.2-201ENST00000623143 306 ntBASIC4.42□□□□□ -1.7
HDDC3Q8N4P3 AC140479.6-201ENST00000633535 357 ntBASIC4.42□□□□□ -1.7
HDDC3Q8N4P3 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
HDDC3Q8N4P3 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.42□□□□□ -1.7
HDDC3Q8N4P3 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.42□□□□□ -1.7
HDDC3Q8N4P3 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
HDDC3Q8N4P3 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
HDDC3Q8N4P3 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HDDC3Q8N4P3 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HDDC3Q8N4P3 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.41□□□□□ -1.7
HDDC3Q8N4P3 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HDDC3Q8N4P3 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HDDC3Q8N4P3 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
HDDC3Q8N4P3 AC138393.1-206ENST00000540997 1886 ntBASIC4.41□□□□□ -1.7
HDDC3Q8N4P3 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.41□□□□□ -1.7
HDDC3Q8N4P3 OR51H2P-202ENST00000641424 3046 ntBASIC4.41□□□□□ -1.7
HDDC3Q8N4P3 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HDDC3Q8N4P3 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
HDDC3Q8N4P3 RNU1-63P-201ENST00000383902 164 ntBASIC4.41□□□□□ -1.7
HDDC3Q8N4P3 MIR124-3-201ENST00000384866 87 ntBASIC4.41□□□□□ -1.7
HDDC3Q8N4P3 RNU2-65P-201ENST00000410162 185 ntBASIC4.41□□□□□ -1.7
HDDC3Q8N4P3 UBE2V1P11-201ENST00000411559 285 ntBASIC4.41□□□□□ -1.7
HDDC3Q8N4P3 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.41□□□□□ -1.7
HDDC3Q8N4P3 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.41□□□□□ -1.7
HDDC3Q8N4P3 Z74021.1-201ENST00000423610 407 ntBASIC4.41□□□□□ -1.7
HDDC3Q8N4P3 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.41□□□□□ -1.7
HDDC3Q8N4P3 ELOCP6-201ENST00000429066 328 ntBASIC4.41□□□□□ -1.7
HDDC3Q8N4P3 RPL21P91-201ENST00000429231 479 ntBASIC4.41□□□□□ -1.7
HDDC3Q8N4P3 RPL23AP52-201ENST00000439311 478 ntBASIC4.41□□□□□ -1.7
HDDC3Q8N4P3 UBE2V1P3-201ENST00000439651 417 ntBASIC4.41□□□□□ -1.7
HDDC3Q8N4P3 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.41□□□□□ -1.7
HDDC3Q8N4P3 ELOCP12-201ENST00000458706 328 ntBASIC4.41□□□□□ -1.7
HDDC3Q8N4P3 snoU13.22-201ENST00000459428 104 ntBASIC4.41□□□□□ -1.7
HDDC3Q8N4P3 AC079804.1-201ENST00000461922 436 ntBASIC4.41□□□□□ -1.7
HDDC3Q8N4P3 OR52A4P-202ENST00000481634 799 ntBASIC4.41□□□□□ -1.7
HDDC3Q8N4P3 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.41□□□□□ -1.7
HDDC3Q8N4P3 AC041039.1-201ENST00000485656 536 ntBASIC4.41□□□□□ -1.7
HDDC3Q8N4P3 AL132838.2-201ENST00000492041 314 ntBASIC4.41□□□□□ -1.7
HDDC3Q8N4P3 RN7SL812P-201ENST00000493791 279 ntBASIC4.41□□□□□ -1.7
HDDC3Q8N4P3 ARL4AP1-201ENST00000503220 705 ntBASIC4.41□□□□□ -1.7
HDDC3Q8N4P3 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.41□□□□□ -1.7
HDDC3Q8N4P3 ATP1B1P1-201ENST00000509767 915 ntBASIC4.41□□□□□ -1.7
HDDC3Q8N4P3 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.41□□□□□ -1.7
HDDC3Q8N4P3 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
HDDC3Q8N4P3 TRAV8-5-201ENST00000537369 341 ntBASIC4.41□□□□□ -1.7
HDDC3Q8N4P3 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.41□□□□□ -1.7
HDDC3Q8N4P3 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.41□□□□□ -1.7
HDDC3Q8N4P3 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC4.41□□□□□ -1.7
HDDC3Q8N4P3 AC090181.2-201ENST00000602975 672 ntBASIC4.41□□□□□ -1.7
HDDC3Q8N4P3 AL392112.1-201ENST00000605115 829 ntBASIC4.41□□□□□ -1.7
HDDC3Q8N4P3 AL450270.1-201ENST00000606160 391 ntBASIC4.41□□□□□ -1.7
HDDC3Q8N4P3 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.41□□□□□ -1.7
HDDC3Q8N4P3 AL158163.1-201ENST00000603915 1649 ntBASIC4.41□□□□□ -1.7
HDDC3Q8N4P3 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
HDDC3Q8N4P3 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HDDC3Q8N4P3 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
HDDC3Q8N4P3 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
HDDC3Q8N4P3 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
HDDC3Q8N4P3 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HDDC3Q8N4P3 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.41□□□□□ -1.7
HDDC3Q8N4P3 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.41□□□□□ -1.7
HDDC3Q8N4P3 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.41□□□□□ -1.7
HDDC3Q8N4P3 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
HDDC3Q8N4P3 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.7
HDDC3Q8N4P3 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.7
HDDC3Q8N4P3 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
HDDC3Q8N4P3 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
HDDC3Q8N4P3 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.4□□□□□ -1.71
HDDC3Q8N4P3 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.4□□□□□ -1.71
HDDC3Q8N4P3 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms