Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
KRT78Q8N1N4 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.03□□□□□ -1.6
KRT78Q8N1N4 ERCC6-202ENST00000374127 1782 ntBASIC5.03□□□□□ -1.6
KRT78Q8N1N4 SAGE2P-201ENST00000420011 2126 ntBASIC5.03□□□□□ -1.6
KRT78Q8N1N4 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
KRT78Q8N1N4 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC5.03□□□□□ -1.6
KRT78Q8N1N4 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.61
KRT78Q8N1N4 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRT78Q8N1N4 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.02□□□□□ -1.61
KRT78Q8N1N4 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
KRT78Q8N1N4 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRT78Q8N1N4 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRT78Q8N1N4 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC5.02□□□□□ -1.61
KRT78Q8N1N4 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRT78Q8N1N4 RN7SKP162-201ENST00000363605 345 ntBASIC5.02□□□□□ -1.61
KRT78Q8N1N4 RNU4-4P-201ENST00000364588 130 ntBASIC5.02□□□□□ -1.61
KRT78Q8N1N4 BMS1P3-201ENST00000372011 932 ntBASIC5.02□□□□□ -1.61
KRT78Q8N1N4 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRT78Q8N1N4 RNU6-657P-201ENST00000383904 107 ntBASIC5.02□□□□□ -1.61
KRT78Q8N1N4 SNRPEP2-201ENST00000397592 279 ntBASIC5.02□□□□□ -1.61
KRT78Q8N1N4 AL133384.1-201ENST00000412744 351 ntBASIC5.02□□□□□ -1.61
KRT78Q8N1N4 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC5.02□□□□□ -1.61
KRT78Q8N1N4 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
KRT78Q8N1N4 TRBV24OR9-2-201ENST00000416632 435 ntBASIC5.02□□□□□ -1.61
KRT78Q8N1N4 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.02□□□□□ -1.61
KRT78Q8N1N4 SLC35E1P1-201ENST00000419313 864 ntBASIC5.02□□□□□ -1.61
KRT78Q8N1N4 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.02□□□□□ -1.61
KRT78Q8N1N4 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC5.02□□□□□ -1.61
KRT78Q8N1N4 AC108075.1-201ENST00000424692 529 ntBASIC5.02□□□□□ -1.61
KRT78Q8N1N4 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC5.02□□□□□ -1.61
KRT78Q8N1N4 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
KRT78Q8N1N4 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.02□□□□□ -1.61
KRT78Q8N1N4 RPL23AP16-201ENST00000441715 421 ntBASIC5.02□□□□□ -1.61
KRT78Q8N1N4 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.02□□□□□ -1.61
KRT78Q8N1N4 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.02□□□□□ -1.61
KRT78Q8N1N4 HMGB3P21-201ENST00000452483 547 ntBASIC5.02□□□□□ -1.61
KRT78Q8N1N4 RN7SL515P-201ENST00000463999 297 ntBASIC5.02□□□□□ -1.61
KRT78Q8N1N4 AC092757.1-201ENST00000467293 467 ntBASIC5.02□□□□□ -1.61
KRT78Q8N1N4 AC104685.1-201ENST00000502445 371 ntBASIC5.02□□□□□ -1.61
KRT78Q8N1N4 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC5.02□□□□□ -1.61
KRT78Q8N1N4 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.02□□□□□ -1.61
KRT78Q8N1N4 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC5.02□□□□□ -1.61
KRT78Q8N1N4 ATP1B1P1-201ENST00000509767 915 ntBASIC5.02□□□□□ -1.61
KRT78Q8N1N4 AC026412.2-201ENST00000512270 1075 ntBASIC5.02□□□□□ -1.61
KRT78Q8N1N4 ATP5LP3-201ENST00000514223 304 ntBASIC5.02□□□□□ -1.61
KRT78Q8N1N4 RNY4P37-201ENST00000516225 96 ntBASIC5.02□□□□□ -1.61
KRT78Q8N1N4 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
KRT78Q8N1N4 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC5.02□□□□□ -1.61
KRT78Q8N1N4 ZNF705CP-201ENST00000530515 889 ntBASIC5.02□□□□□ -1.61
KRT78Q8N1N4 CYCSP28-201ENST00000534284 321 ntBASIC5.02□□□□□ -1.61
KRT78Q8N1N4 AC008127.2-201ENST00000549925 1075 ntBASIC5.02□□□□□ -1.61
KRT78Q8N1N4 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC5.02□□□□□ -1.61
KRT78Q8N1N4 AC107982.3-201ENST00000584957 985 ntBASIC5.02□□□□□ -1.61
KRT78Q8N1N4 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.02□□□□□ -1.61
KRT78Q8N1N4 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
KRT78Q8N1N4 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
KRT78Q8N1N4 AC010857.1-201ENST00000606398 594 ntBASIC5.02□□□□□ -1.61
KRT78Q8N1N4 AP001521.1-201ENST00000609150 300 ntBASIC5.02□□□□□ -1.61
KRT78Q8N1N4 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC5.02□□□□□ -1.61
KRT78Q8N1N4 MIR6768-201ENST00000610734 72 ntBASIC5.02□□□□□ -1.61
KRT78Q8N1N4 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
KRT78Q8N1N4 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.02□□□□□ -1.61
KRT78Q8N1N4 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRT78Q8N1N4 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
KRT78Q8N1N4 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
KRT78Q8N1N4 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
KRT78Q8N1N4 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
KRT78Q8N1N4 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
KRT78Q8N1N4 AL450345.1-202ENST00000605741 3881 ntBASIC5.01□□□□□ -1.61
KRT78Q8N1N4 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
KRT78Q8N1N4 MAPK10-304ENST00000641341 3984 ntBASIC5.01□□□□□ -1.61
KRT78Q8N1N4 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
KRT78Q8N1N4 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
KRT78Q8N1N4 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
KRT78Q8N1N4 OR9K1P-201ENST00000326513 941 ntBASIC5.01□□□□□ -1.61
KRT78Q8N1N4 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
KRT78Q8N1N4 RNA5SP183-201ENST00000362452 119 ntBASIC5.01□□□□□ -1.61
KRT78Q8N1N4 U3.7-201ENST00000363668 216 ntBASIC5.01□□□□□ -1.61
KRT78Q8N1N4 MIR600-201ENST00000385007 98 ntBASIC5.01□□□□□ -1.61
KRT78Q8N1N4 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
KRT78Q8N1N4 RPL21P67-201ENST00000402896 478 ntBASIC5.01□□□□□ -1.61
KRT78Q8N1N4 AC073264.1-201ENST00000411508 416 ntBASIC5.01□□□□□ -1.61
KRT78Q8N1N4 USP9YP33-201ENST00000412220 421 ntBASIC5.01□□□□□ -1.61
KRT78Q8N1N4 RPL12P9-201ENST00000412942 488 ntBASIC5.01□□□□□ -1.61
KRT78Q8N1N4 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC5.01□□□□□ -1.61
KRT78Q8N1N4 AC004074.1-201ENST00000421810 1063 ntBASIC5.01□□□□□ -1.61
KRT78Q8N1N4 AL365203.2-201ENST00000423444 196 ntBASIC5.01□□□□□ -1.61
KRT78Q8N1N4 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.01□□□□□ -1.61
KRT78Q8N1N4 AL593851.1-201ENST00000426171 157 ntBASIC5.01□□□□□ -1.61
KRT78Q8N1N4 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.01□□□□□ -1.61
KRT78Q8N1N4 NPM1P34-201ENST00000428821 893 ntBASIC5.01□□□□□ -1.61
KRT78Q8N1N4 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC5.01□□□□□ -1.61
KRT78Q8N1N4 USP9YP35-201ENST00000435696 412 ntBASIC5.01□□□□□ -1.61
KRT78Q8N1N4 UBE2D3P1-201ENST00000436669 444 ntBASIC5.01□□□□□ -1.61
KRT78Q8N1N4 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
KRT78Q8N1N4 MTND2P20-201ENST00000440805 661 ntBASIC5.01□□□□□ -1.61
KRT78Q8N1N4 GTF3AP5-201ENST00000442645 697 ntBASIC5.01□□□□□ -1.61
KRT78Q8N1N4 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC5.01□□□□□ -1.61
KRT78Q8N1N4 SLC31A1P1-201ENST00000451221 567 ntBASIC5.01□□□□□ -1.61
KRT78Q8N1N4 IFNWP4-201ENST00000453148 294 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms