Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
C9orf40Q8IXQ3 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
C9orf40Q8IXQ3 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
C9orf40Q8IXQ3 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
C9orf40Q8IXQ3 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
C9orf40Q8IXQ3 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
C9orf40Q8IXQ3 AC009313.2-201ENST00000417893 1941 ntBASIC3.84□□□□□ -1.79
C9orf40Q8IXQ3 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
C9orf40Q8IXQ3 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
C9orf40Q8IXQ3 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.84□□□□□ -1.79
C9orf40Q8IXQ3 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
C9orf40Q8IXQ3 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
C9orf40Q8IXQ3 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
C9orf40Q8IXQ3 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
C9orf40Q8IXQ3 MIR142-201ENST00000384835 87 ntBASIC3.84□□□□□ -1.79
C9orf40Q8IXQ3 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
C9orf40Q8IXQ3 AC136624.1-201ENST00000400791 413 ntBASIC3.84□□□□□ -1.79
C9orf40Q8IXQ3 ATP5F1P6-201ENST00000402768 767 ntBASIC3.84□□□□□ -1.79
C9orf40Q8IXQ3 HMGB1P13-201ENST00000406019 642 ntBASIC3.84□□□□□ -1.79
C9orf40Q8IXQ3 RPL23AP48-201ENST00000406913 488 ntBASIC3.84□□□□□ -1.79
C9orf40Q8IXQ3 RNA5SP317-201ENST00000410176 116 ntBASIC3.84□□□□□ -1.79
C9orf40Q8IXQ3 RNA5SP311-201ENST00000411290 116 ntBASIC3.84□□□□□ -1.79
C9orf40Q8IXQ3 OR8G2P-201ENST00000412796 908 ntBASIC3.84□□□□□ -1.79
C9orf40Q8IXQ3 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.84□□□□□ -1.79
C9orf40Q8IXQ3 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC3.84□□□□□ -1.79
C9orf40Q8IXQ3 IPMKP1-201ENST00000425988 855 ntBASIC3.84□□□□□ -1.79
C9orf40Q8IXQ3 AC004975.1-201ENST00000428733 208 ntBASIC3.84□□□□□ -1.79
C9orf40Q8IXQ3 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC3.84□□□□□ -1.79
C9orf40Q8IXQ3 MRPL50P1-201ENST00000431951 384 ntBASIC3.84□□□□□ -1.79
C9orf40Q8IXQ3 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC3.84□□□□□ -1.79
C9orf40Q8IXQ3 RPL23AP89-201ENST00000439324 255 ntBASIC3.84□□□□□ -1.79
C9orf40Q8IXQ3 AC006011.1-201ENST00000442758 349 ntBASIC3.84□□□□□ -1.79
C9orf40Q8IXQ3 AC069540.1-201ENST00000446320 988 ntBASIC3.84□□□□□ -1.79
C9orf40Q8IXQ3 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.84□□□□□ -1.79
C9orf40Q8IXQ3 NUTF2P7-201ENST00000453086 375 ntBASIC3.84□□□□□ -1.79
C9orf40Q8IXQ3 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC3.84□□□□□ -1.79
C9orf40Q8IXQ3 IGBP1P5-201ENST00000507524 1000 ntBASIC3.84□□□□□ -1.79
C9orf40Q8IXQ3 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC3.84□□□□□ -1.79
C9orf40Q8IXQ3 RNA5SP315-201ENST00000516340 116 ntBASIC3.84□□□□□ -1.79
C9orf40Q8IXQ3 RNA5SP312-201ENST00000517068 116 ntBASIC3.84□□□□□ -1.79
C9orf40Q8IXQ3 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.84□□□□□ -1.79
C9orf40Q8IXQ3 UBTFL9-201ENST00000534504 1148 ntBASIC3.84□□□□□ -1.79
C9orf40Q8IXQ3 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC3.84□□□□□ -1.79
C9orf40Q8IXQ3 CR383656.14-201ENST00000551951 406 ntBASIC3.84□□□□□ -1.79
C9orf40Q8IXQ3 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC3.84□□□□□ -1.79
C9orf40Q8IXQ3 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.84□□□□□ -1.79
C9orf40Q8IXQ3 AC093510.2-201ENST00000562820 896 ntBASIC3.84□□□□□ -1.79
C9orf40Q8IXQ3 AC124068.1-201ENST00000563131 678 ntBASIC3.84□□□□□ -1.79
C9orf40Q8IXQ3 AC106785.3-201ENST00000564064 847 ntBASIC3.84□□□□□ -1.79
C9orf40Q8IXQ3 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.84□□□□□ -1.79
C9orf40Q8IXQ3 MIR3908-201ENST00000579798 126 ntBASIC3.84□□□□□ -1.79
C9orf40Q8IXQ3 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
C9orf40Q8IXQ3 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC3.84□□□□□ -1.79
C9orf40Q8IXQ3 AC010608.2-201ENST00000624830 470 ntBASIC3.84□□□□□ -1.79
C9orf40Q8IXQ3 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
C9orf40Q8IXQ3 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
C9orf40Q8IXQ3 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
C9orf40Q8IXQ3 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
C9orf40Q8IXQ3 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
C9orf40Q8IXQ3 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
C9orf40Q8IXQ3 MTND5P11-201ENST00000511037 1812 ntBASIC3.84□□□□□ -1.8
C9orf40Q8IXQ3 AC092079.1-201ENST00000558620 1985 ntBASIC3.83□□□□□ -1.8
C9orf40Q8IXQ3 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.83□□□□□ -1.8
C9orf40Q8IXQ3 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
C9orf40Q8IXQ3 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
C9orf40Q8IXQ3 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
C9orf40Q8IXQ3 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
C9orf40Q8IXQ3 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC3.83□□□□□ -1.8
C9orf40Q8IXQ3 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
C9orf40Q8IXQ3 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
C9orf40Q8IXQ3 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
C9orf40Q8IXQ3 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
C9orf40Q8IXQ3 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
C9orf40Q8IXQ3 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
C9orf40Q8IXQ3 RNA5SP130-201ENST00000364431 114 ntBASIC3.83□□□□□ -1.8
C9orf40Q8IXQ3 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
C9orf40Q8IXQ3 SNORA68.2-201ENST00000391263 128 ntBASIC3.83□□□□□ -1.8
C9orf40Q8IXQ3 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.83□□□□□ -1.8
C9orf40Q8IXQ3 RNU4-27P-201ENST00000410889 139 ntBASIC3.83□□□□□ -1.8
C9orf40Q8IXQ3 EIF4A1P3-201ENST00000411521 244 ntBASIC3.83□□□□□ -1.8
C9orf40Q8IXQ3 AC108032.1-201ENST00000416706 207 ntBASIC3.83□□□□□ -1.8
C9orf40Q8IXQ3 LINC01347-201ENST00000417964 355 ntBASIC3.83□□□□□ -1.8
C9orf40Q8IXQ3 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
C9orf40Q8IXQ3 TRAPPC2P5-201ENST00000426293 308 ntBASIC3.83□□□□□ -1.8
C9orf40Q8IXQ3 AL512661.1-201ENST00000434586 1253 ntBASIC3.83□□□□□ -1.8
C9orf40Q8IXQ3 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.83□□□□□ -1.8
C9orf40Q8IXQ3 AL356276.2-201ENST00000435919 558 ntBASIC3.83□□□□□ -1.8
C9orf40Q8IXQ3 AL451050.1-201ENST00000450126 415 ntBASIC3.83□□□□□ -1.8
C9orf40Q8IXQ3 AL354710.1-201ENST00000453641 246 ntBASIC3.83□□□□□ -1.8
C9orf40Q8IXQ3 RAD23BP3-201ENST00000454157 1152 ntBASIC3.83□□□□□ -1.8
C9orf40Q8IXQ3 RPS7P7-201ENST00000463499 571 ntBASIC3.83□□□□□ -1.8
C9orf40Q8IXQ3 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
C9orf40Q8IXQ3 AC103987.1-201ENST00000473394 348 ntBASIC3.83□□□□□ -1.8
C9orf40Q8IXQ3 METTL15P1-201ENST00000481421 1045 ntBASIC3.83□□□□□ -1.8
C9orf40Q8IXQ3 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC3.83□□□□□ -1.8
C9orf40Q8IXQ3 MTCO1P35-201ENST00000515270 228 ntBASIC3.83□□□□□ -1.8
C9orf40Q8IXQ3 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.83□□□□□ -1.8
C9orf40Q8IXQ3 AC113192.3-201ENST00000529152 742 ntBASIC3.83□□□□□ -1.8
C9orf40Q8IXQ3 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.83□□□□□ -1.8
C9orf40Q8IXQ3 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms