Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.04□□□□□ -1.6
VRK3Q8IV63 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC5.04□□□□□ -1.6
VRK3Q8IV63 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.04□□□□□ -1.6
VRK3Q8IV63 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
VRK3Q8IV63 AC074029.1-201ENST00000552531 1044 ntBASIC5.04□□□□□ -1.6
VRK3Q8IV63 AC009063.1-201ENST00000563342 702 ntBASIC5.04□□□□□ -1.6
VRK3Q8IV63 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
VRK3Q8IV63 AC119501.1-201ENST00000603646 475 ntBASIC5.04□□□□□ -1.6
VRK3Q8IV63 AC008945.2-201ENST00000606056 604 ntBASIC5.04□□□□□ -1.6
VRK3Q8IV63 RNU4-89P-201ENST00000607443 133 ntBASIC5.04□□□□□ -1.6
VRK3Q8IV63 AP000238.1-201ENST00000608759 426 ntBASIC5.04□□□□□ -1.6
VRK3Q8IV63 AL589743.7-201ENST00000612637 233 ntBASIC5.04□□□□□ -1.6
VRK3Q8IV63 AC007742.2-201ENST00000618226 398 ntBASIC5.04□□□□□ -1.6
VRK3Q8IV63 AC241377.1-201ENST00000619797 406 ntBASIC5.04□□□□□ -1.6
VRK3Q8IV63 AC025048.6-202ENST00000627667 438 ntBASIC5.04□□□□□ -1.6
VRK3Q8IV63 AC116618.1-201ENST00000634617 774 ntBASIC5.04□□□□□ -1.6
VRK3Q8IV63 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
VRK3Q8IV63 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VRK3Q8IV63 CDY11P-201ENST00000447168 1651 ntBASIC5.04□□□□□ -1.6
VRK3Q8IV63 C4BPAP1-201ENST00000415474 1893 ntBASIC5.04□□□□□ -1.6
VRK3Q8IV63 SPATA2P1-201ENST00000431223 2055 ntBASIC5.04□□□□□ -1.6
VRK3Q8IV63 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC5.04□□□□□ -1.6
VRK3Q8IV63 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.04□□□□□ -1.6
VRK3Q8IV63 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VRK3Q8IV63 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.04□□□□□ -1.6
VRK3Q8IV63 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
VRK3Q8IV63 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
VRK3Q8IV63 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.03□□□□□ -1.6
VRK3Q8IV63 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
VRK3Q8IV63 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
VRK3Q8IV63 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.03□□□□□ -1.6
VRK3Q8IV63 U3.7-201ENST00000363668 216 ntBASIC5.03□□□□□ -1.6
VRK3Q8IV63 RNU6-621P-201ENST00000364752 109 ntBASIC5.03□□□□□ -1.6
VRK3Q8IV63 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
VRK3Q8IV63 RNU6-348P-201ENST00000384386 107 ntBASIC5.03□□□□□ -1.6
VRK3Q8IV63 AL390316.1-201ENST00000406279 553 ntBASIC5.03□□□□□ -1.6
VRK3Q8IV63 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.03□□□□□ -1.6
VRK3Q8IV63 RN7SKP16-201ENST00000410180 299 ntBASIC5.03□□□□□ -1.6
VRK3Q8IV63 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC5.03□□□□□ -1.6
VRK3Q8IV63 RPS7P13-201ENST00000413955 498 ntBASIC5.03□□□□□ -1.6
VRK3Q8IV63 VTA1P1-201ENST00000414044 866 ntBASIC5.03□□□□□ -1.6
VRK3Q8IV63 COX5BP7-201ENST00000414780 274 ntBASIC5.03□□□□□ -1.6
VRK3Q8IV63 ATG4AP1-201ENST00000416893 538 ntBASIC5.03□□□□□ -1.6
VRK3Q8IV63 UBTFL3-201ENST00000418934 1024 ntBASIC5.03□□□□□ -1.6
VRK3Q8IV63 GTF2IP23-201ENST00000423746 351 ntBASIC5.03□□□□□ -1.6
VRK3Q8IV63 MTCO1P3-201ENST00000429327 192 ntBASIC5.03□□□□□ -1.6
VRK3Q8IV63 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.03□□□□□ -1.6
VRK3Q8IV63 BX323845.1-201ENST00000432417 179 ntBASIC5.03□□□□□ -1.6
VRK3Q8IV63 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC5.03□□□□□ -1.6
VRK3Q8IV63 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC5.03□□□□□ -1.6
VRK3Q8IV63 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC5.03□□□□□ -1.6
VRK3Q8IV63 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC5.03□□□□□ -1.6
VRK3Q8IV63 RN7SL799P-201ENST00000475891 298 ntBASIC5.03□□□□□ -1.6
VRK3Q8IV63 UBTFL6-201ENST00000477929 1024 ntBASIC5.03□□□□□ -1.6
VRK3Q8IV63 SNRPCP2-201ENST00000504370 475 ntBASIC5.03□□□□□ -1.6
VRK3Q8IV63 AC090071.1-201ENST00000507713 644 ntBASIC5.03□□□□□ -1.6
VRK3Q8IV63 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.03□□□□□ -1.6
VRK3Q8IV63 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
VRK3Q8IV63 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC5.03□□□□□ -1.6
VRK3Q8IV63 AC100784.1-201ENST00000522790 310 ntBASIC5.03□□□□□ -1.6
VRK3Q8IV63 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.03□□□□□ -1.6
VRK3Q8IV63 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.03□□□□□ -1.6
VRK3Q8IV63 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC5.03□□□□□ -1.6
VRK3Q8IV63 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC5.03□□□□□ -1.6
VRK3Q8IV63 AC005832.3-201ENST00000537929 631 ntBASIC5.03□□□□□ -1.6
VRK3Q8IV63 AP002373.2-201ENST00000541631 1060 ntBASIC5.03□□□□□ -1.6
VRK3Q8IV63 AC092747.2-201ENST00000545069 983 ntBASIC5.03□□□□□ -1.6
VRK3Q8IV63 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.03□□□□□ -1.6
VRK3Q8IV63 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC5.03□□□□□ -1.6
VRK3Q8IV63 AC040958.1-201ENST00000561102 201 ntBASIC5.03□□□□□ -1.6
VRK3Q8IV63 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.03□□□□□ -1.6
VRK3Q8IV63 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.03□□□□□ -1.6
VRK3Q8IV63 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC5.03□□□□□ -1.6
VRK3Q8IV63 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
VRK3Q8IV63 AL390816.3-201ENST00000604527 1066 ntBASIC5.03□□□□□ -1.6
VRK3Q8IV63 AL159169.3-201ENST00000608871 561 ntBASIC5.03□□□□□ -1.6
VRK3Q8IV63 AC004948.1-201ENST00000609858 672 ntBASIC5.03□□□□□ -1.6
VRK3Q8IV63 AC106028.5-201ENST00000610332 395 ntBASIC5.03□□□□□ -1.6
VRK3Q8IV63 AC007014.2-201ENST00000615581 479 ntBASIC5.03□□□□□ -1.6
VRK3Q8IV63 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.03□□□□□ -1.6
VRK3Q8IV63 AC024023.1-201ENST00000624530 922 ntBASIC5.03□□□□□ -1.6
VRK3Q8IV63 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC5.03□□□□□ -1.6
VRK3Q8IV63 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
VRK3Q8IV63 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
VRK3Q8IV63 RARSP1-201ENST00000542842 1418 ntBASIC5.03□□□□□ -1.6
VRK3Q8IV63 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC5.03□□□□□ -1.6
VRK3Q8IV63 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.03□□□□□ -1.6
VRK3Q8IV63 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
VRK3Q8IV63 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
VRK3Q8IV63 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
VRK3Q8IV63 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
VRK3Q8IV63 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
VRK3Q8IV63 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.03□□□□□ -1.6
VRK3Q8IV63 AC004817.4-201ENST00000602396 3625 ntBASIC5.03□□□□□ -1.6
VRK3Q8IV63 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
VRK3Q8IV63 MTCO1P7-201ENST00000419523 1542 ntBASIC5.02□□□□□ -1.61
VRK3Q8IV63 AL353743.4-201ENST00000422653 1547 ntBASIC5.02□□□□□ -1.61
VRK3Q8IV63 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.02□□□□□ -1.61
VRK3Q8IV63 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
VRK3Q8IV63 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms