Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 RPL21P7-201ENST00000557463 483 ntBASIC2.91□□□□□ -1.94
VPS13CQ709C8 CKS1BP3-201ENST00000600888 237 ntBASIC2.91□□□□□ -1.94
VPS13CQ709C8 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC2.91□□□□□ -1.94
VPS13CQ709C8 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
VPS13CQ709C8 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
VPS13CQ709C8 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.91□□□□□ -1.94
VPS13CQ709C8 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
VPS13CQ709C8 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
VPS13CQ709C8 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC2.91□□□□□ -1.94
VPS13CQ709C8 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
VPS13CQ709C8 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.94
VPS13CQ709C8 RNU1-15P-201ENST00000353977 144 ntBASIC2.9□□□□□ -1.94
VPS13CQ709C8 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
VPS13CQ709C8 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.9□□□□□ -1.94
VPS13CQ709C8 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
VPS13CQ709C8 HSPE1P27-201ENST00000430808 296 ntBASIC2.9□□□□□ -1.94
VPS13CQ709C8 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.9□□□□□ -1.94
VPS13CQ709C8 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC2.9□□□□□ -1.94
VPS13CQ709C8 MIR7111-201ENST00000619751 72 ntBASIC2.9□□□□□ -1.94
VPS13CQ709C8 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC2.9□□□□□ -1.94
VPS13CQ709C8 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
VPS13CQ709C8 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
VPS13CQ709C8 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.94
VPS13CQ709C8 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC2.9□□□□□ -1.94
VPS13CQ709C8 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC2.9□□□□□ -1.94
VPS13CQ709C8 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
VPS13CQ709C8 AC073522.1-201ENST00000483312 377 ntBASIC2.9□□□□□ -1.94
VPS13CQ709C8 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC2.9□□□□□ -1.94
VPS13CQ709C8 AC092868.3-201ENST00000560515 784 ntBASIC2.9□□□□□ -1.94
VPS13CQ709C8 5S_rRNA.16-201ENST00000612928 119 ntBASIC2.9□□□□□ -1.94
VPS13CQ709C8 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
VPS13CQ709C8 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
VPS13CQ709C8 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
VPS13CQ709C8 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.95
VPS13CQ709C8 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
VPS13CQ709C8 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC2.9□□□□□ -1.95
VPS13CQ709C8 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC2.9□□□□□ -1.95
VPS13CQ709C8 NANOGNBP1-201ENST00000448444 480 ntBASIC2.9□□□□□ -1.95
VPS13CQ709C8 AC139783.2-201ENST00000504847 1145 ntBASIC2.9□□□□□ -1.95
VPS13CQ709C8 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC2.9□□□□□ -1.95
VPS13CQ709C8 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC2.9□□□□□ -1.95
VPS13CQ709C8 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
VPS13CQ709C8 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
VPS13CQ709C8 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
VPS13CQ709C8 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC2.9□□□□□ -1.95
VPS13CQ709C8 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
VPS13CQ709C8 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
VPS13CQ709C8 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
VPS13CQ709C8 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.89□□□□□ -1.95
VPS13CQ709C8 TAF9BP1-201ENST00000396646 746 ntBASIC2.89□□□□□ -1.95
VPS13CQ709C8 BX890604.2-201ENST00000427883 474 ntBASIC2.89□□□□□ -1.95
VPS13CQ709C8 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC2.89□□□□□ -1.95
VPS13CQ709C8 AC097262.1-201ENST00000452559 548 ntBASIC2.89□□□□□ -1.95
VPS13CQ709C8 RNU6-579P-201ENST00000516879 102 ntBASIC2.89□□□□□ -1.95
VPS13CQ709C8 AC018442.3-201ENST00000523025 183 ntBASIC2.89□□□□□ -1.95
VPS13CQ709C8 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.89□□□□□ -1.95
VPS13CQ709C8 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC2.89□□□□□ -1.95
VPS13CQ709C8 AC010503.3-201ENST00000594355 540 ntBASIC2.89□□□□□ -1.95
VPS13CQ709C8 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC2.89□□□□□ -1.95
VPS13CQ709C8 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
VPS13CQ709C8 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
VPS13CQ709C8 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC2.89□□□□□ -1.95
VPS13CQ709C8 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
VPS13CQ709C8 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
VPS13CQ709C8 AC005183.1-201ENST00000603687 1979 ntBASIC2.89□□□□□ -1.95
VPS13CQ709C8 OR5J1P-201ENST00000313544 939 ntBASIC2.89□□□□□ -1.95
VPS13CQ709C8 RNA5SP293-201ENST00000410527 113 ntBASIC2.89□□□□□ -1.95
VPS13CQ709C8 COTL1P1-201ENST00000422309 375 ntBASIC2.89□□□□□ -1.95
VPS13CQ709C8 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC2.89□□□□□ -1.95
VPS13CQ709C8 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC2.89□□□□□ -1.95
VPS13CQ709C8 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC2.89□□□□□ -1.95
VPS13CQ709C8 NRBF2P5-201ENST00000603087 788 ntBASIC2.89□□□□□ -1.95
VPS13CQ709C8 AC100793.4-201ENST00000613683 429 ntBASIC2.89□□□□□ -1.95
VPS13CQ709C8 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
VPS13CQ709C8 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
VPS13CQ709C8 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC2.89□□□□□ -1.95
VPS13CQ709C8 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC2.89□□□□□ -1.95
VPS13CQ709C8 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
VPS13CQ709C8 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
VPS13CQ709C8 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
VPS13CQ709C8 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC2.89□□□□□ -1.95
VPS13CQ709C8 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC2.89□□□□□ -1.95
VPS13CQ709C8 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
VPS13CQ709C8 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
VPS13CQ709C8 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC2.89□□□□□ -1.95
VPS13CQ709C8 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC2.89□□□□□ -1.95
VPS13CQ709C8 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC2.89□□□□□ -1.95
VPS13CQ709C8 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
VPS13CQ709C8 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC2.89□□□□□ -1.95
VPS13CQ709C8 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC2.89□□□□□ -1.95
VPS13CQ709C8 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
VPS13CQ709C8 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
VPS13CQ709C8 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
VPS13CQ709C8 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
VPS13CQ709C8 RPL7P48-201ENST00000461513 746 ntBASIC2.88□□□□□ -1.95
VPS13CQ709C8 AC012603.1-201ENST00000606424 528 ntBASIC2.88□□□□□ -1.95
VPS13CQ709C8 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC2.88□□□□□ -1.95
VPS13CQ709C8 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
VPS13CQ709C8 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
VPS13CQ709C8 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 133 ms