Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AC093720.1-201ENST00000505681 714 ntBASIC3.75□□□□□ -1.81
RFX4Q33E94 HMGB1P47-201ENST00000511281 589 ntBASIC3.75□□□□□ -1.81
RFX4Q33E94 KCTD9P2-201ENST00000512203 1013 ntBASIC3.75□□□□□ -1.81
RFX4Q33E94 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.75□□□□□ -1.81
RFX4Q33E94 RNA5SP49-201ENST00000516450 115 ntBASIC3.75□□□□□ -1.81
RFX4Q33E94 RNA5SP519-201ENST00000516480 119 ntBASIC3.75□□□□□ -1.81
RFX4Q33E94 AC010476.1-201ENST00000519111 851 ntBASIC3.75□□□□□ -1.81
RFX4Q33E94 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.75□□□□□ -1.81
RFX4Q33E94 MTND1P6-201ENST00000523621 946 ntBASIC3.75□□□□□ -1.81
RFX4Q33E94 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.75□□□□□ -1.81
RFX4Q33E94 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.75□□□□□ -1.81
RFX4Q33E94 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.75□□□□□ -1.81
RFX4Q33E94 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC3.75□□□□□ -1.81
RFX4Q33E94 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC3.75□□□□□ -1.81
RFX4Q33E94 MIR4644-201ENST00000579929 84 ntBASIC3.75□□□□□ -1.81
RFX4Q33E94 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC3.75□□□□□ -1.81
RFX4Q33E94 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.75□□□□□ -1.81
RFX4Q33E94 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
RFX4Q33E94 AP004372.1-201ENST00000604842 844 ntBASIC3.75□□□□□ -1.81
RFX4Q33E94 AL451044.1-201ENST00000604867 238 ntBASIC3.75□□□□□ -1.81
RFX4Q33E94 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC3.75□□□□□ -1.81
RFX4Q33E94 AL096803.3-201ENST00000609032 532 ntBASIC3.75□□□□□ -1.81
RFX4Q33E94 BX323046.1-201ENST00000610145 535 ntBASIC3.75□□□□□ -1.81
RFX4Q33E94 AL118556.2-201ENST00000614375 824 ntBASIC3.75□□□□□ -1.81
RFX4Q33E94 AC090246.1-201ENST00000616499 426 ntBASIC3.75□□□□□ -1.81
RFX4Q33E94 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
RFX4Q33E94 SPATA2P1-201ENST00000431223 2055 ntBASIC3.75□□□□□ -1.81
RFX4Q33E94 MFSD8-216ENST00000641147 4009 ntBASIC3.75□□□□□ -1.81
RFX4Q33E94 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.75□□□□□ -1.81
RFX4Q33E94 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
RFX4Q33E94 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
RFX4Q33E94 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
RFX4Q33E94 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
RFX4Q33E94 AC012618.3-205ENST00000637896 1496 ntBASIC3.74□□□□□ -1.81
RFX4Q33E94 AC090229.1-201ENST00000590983 1609 ntBASIC3.74□□□□□ -1.81
RFX4Q33E94 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
RFX4Q33E94 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
RFX4Q33E94 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
RFX4Q33E94 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
RFX4Q33E94 RNU4-39P-201ENST00000362455 127 ntBASIC3.74□□□□□ -1.81
RFX4Q33E94 RN7SKP177-201ENST00000410567 355 ntBASIC3.74□□□□□ -1.81
RFX4Q33E94 BTF3P9-201ENST00000418784 283 ntBASIC3.74□□□□□ -1.81
RFX4Q33E94 CHIAP3-201ENST00000423668 1133 ntBASIC3.74□□□□□ -1.81
RFX4Q33E94 FTH1P6-201ENST00000430768 320 ntBASIC3.74□□□□□ -1.81
RFX4Q33E94 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.74□□□□□ -1.81
RFX4Q33E94 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.74□□□□□ -1.81
RFX4Q33E94 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
RFX4Q33E94 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.74□□□□□ -1.81
RFX4Q33E94 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.74□□□□□ -1.81
RFX4Q33E94 AC005229.2-201ENST00000456995 399 ntBASIC3.74□□□□□ -1.81
RFX4Q33E94 RPL21P71-201ENST00000465598 459 ntBASIC3.74□□□□□ -1.81
RFX4Q33E94 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC3.74□□□□□ -1.81
RFX4Q33E94 RPL35P6-201ENST00000490024 372 ntBASIC3.74□□□□□ -1.81
RFX4Q33E94 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.74□□□□□ -1.81
RFX4Q33E94 AC090543.1-201ENST00000492168 485 ntBASIC3.74□□□□□ -1.81
RFX4Q33E94 RN7SL691P-201ENST00000494487 301 ntBASIC3.74□□□□□ -1.81
RFX4Q33E94 CEP170P1-201ENST00000502249 4587 ntBASIC3.74□□□□□ -1.81
RFX4Q33E94 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.74□□□□□ -1.81
RFX4Q33E94 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC3.74□□□□□ -1.81
RFX4Q33E94 RNU6-889P-201ENST00000517189 103 ntBASIC3.74□□□□□ -1.81
RFX4Q33E94 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC3.74□□□□□ -1.81
RFX4Q33E94 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
RFX4Q33E94 TRAV8-5-201ENST00000537369 341 ntBASIC3.74□□□□□ -1.81
RFX4Q33E94 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.74□□□□□ -1.81
RFX4Q33E94 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC3.74□□□□□ -1.81
RFX4Q33E94 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.74□□□□□ -1.81
RFX4Q33E94 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC3.74□□□□□ -1.81
RFX4Q33E94 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.74□□□□□ -1.81
RFX4Q33E94 AC007423.1-201ENST00000605009 627 ntBASIC3.74□□□□□ -1.81
RFX4Q33E94 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.74□□□□□ -1.81
RFX4Q33E94 AL118508.4-201ENST00000624142 1176 ntBASIC3.74□□□□□ -1.81
RFX4Q33E94 MFSD8-220ENST00000641243 1422 ntBASIC3.74□□□□□ -1.81
RFX4Q33E94 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
RFX4Q33E94 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
RFX4Q33E94 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.74□□□□□ -1.81
RFX4Q33E94 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
RFX4Q33E94 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
RFX4Q33E94 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
RFX4Q33E94 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.73□□□□□ -1.81
RFX4Q33E94 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
RFX4Q33E94 AL136964.1-201ENST00000622038 2990 ntBASIC3.73□□□□□ -1.81
RFX4Q33E94 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
RFX4Q33E94 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
RFX4Q33E94 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
RFX4Q33E94 RNU1-87P-201ENST00000363727 170 ntBASIC3.73□□□□□ -1.81
RFX4Q33E94 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
RFX4Q33E94 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
RFX4Q33E94 MIR192-201ENST00000384915 110 ntBASIC3.73□□□□□ -1.81
RFX4Q33E94 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
RFX4Q33E94 CYB5AP4-201ENST00000396692 399 ntBASIC3.73□□□□□ -1.81
RFX4Q33E94 ATP5F1P4-201ENST00000397288 746 ntBASIC3.73□□□□□ -1.81
RFX4Q33E94 HLFP1-201ENST00000402375 499 ntBASIC3.73□□□□□ -1.81
RFX4Q33E94 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.73□□□□□ -1.81
RFX4Q33E94 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC3.73□□□□□ -1.81
RFX4Q33E94 NPM1P34-201ENST00000428821 893 ntBASIC3.73□□□□□ -1.81
RFX4Q33E94 RPS29P17-201ENST00000430795 166 ntBASIC3.73□□□□□ -1.81
RFX4Q33E94 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.73□□□□□ -1.81
RFX4Q33E94 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC3.73□□□□□ -1.81
RFX4Q33E94 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.73□□□□□ -1.81
RFX4Q33E94 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms