Protein–RNA interactions for Protein: Q17RB0

RTL8B, Retrotransposon Gag-like protein 8B, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8BQ17RB0 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RTL8BQ17RB0 CASC19-284ENST00000642142 1868 ntBASIC3.16□□□□□ -1.9
RTL8BQ17RB0 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
RTL8BQ17RB0 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
RTL8BQ17RB0 CCT8P1-201ENST00000413611 1657 ntBASIC3.15□□□□□ -1.9
RTL8BQ17RB0 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
RTL8BQ17RB0 HSPA8P1-201ENST00000425843 1833 ntBASIC3.15□□□□□ -1.91
RTL8BQ17RB0 AC007685.1-201ENST00000329806 452 ntBASIC3.15□□□□□ -1.91
RTL8BQ17RB0 RNA5SP443-201ENST00000363083 132 ntBASIC3.15□□□□□ -1.91
RTL8BQ17RB0 RNU6-304P-201ENST00000364855 107 ntBASIC3.15□□□□□ -1.91
RTL8BQ17RB0 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
RTL8BQ17RB0 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
RTL8BQ17RB0 AL022722.2-201ENST00000402519 180 ntBASIC3.15□□□□□ -1.91
RTL8BQ17RB0 RNU4-6P-201ENST00000410804 122 ntBASIC3.15□□□□□ -1.91
RTL8BQ17RB0 AC096644.3-201ENST00000416788 338 ntBASIC3.15□□□□□ -1.91
RTL8BQ17RB0 Z97055.1-201ENST00000419730 712 ntBASIC3.15□□□□□ -1.91
RTL8BQ17RB0 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.15□□□□□ -1.91
RTL8BQ17RB0 AC093698.1-201ENST00000423843 571 ntBASIC3.15□□□□□ -1.91
RTL8BQ17RB0 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.15□□□□□ -1.91
RTL8BQ17RB0 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.15□□□□□ -1.91
RTL8BQ17RB0 NPM1P34-201ENST00000428821 893 ntBASIC3.15□□□□□ -1.91
RTL8BQ17RB0 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.15□□□□□ -1.91
RTL8BQ17RB0 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.15□□□□□ -1.91
RTL8BQ17RB0 AC009263.1-201ENST00000441193 1239 ntBASIC3.15□□□□□ -1.91
RTL8BQ17RB0 NANOGP10-201ENST00000453325 895 ntBASIC3.15□□□□□ -1.91
RTL8BQ17RB0 SNRPGP5-201ENST00000456003 220 ntBASIC3.15□□□□□ -1.91
RTL8BQ17RB0 RNU6-1218P-201ENST00000458990 108 ntBASIC3.15□□□□□ -1.91
RTL8BQ17RB0 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC3.15□□□□□ -1.91
RTL8BQ17RB0 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
RTL8BQ17RB0 RNA5SP164-201ENST00000516533 110 ntBASIC3.15□□□□□ -1.91
RTL8BQ17RB0 AC008802.1-201ENST00000519121 791 ntBASIC3.15□□□□□ -1.91
RTL8BQ17RB0 SUMO2P20-201ENST00000520803 283 ntBASIC3.15□□□□□ -1.91
RTL8BQ17RB0 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.15□□□□□ -1.91
RTL8BQ17RB0 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.15□□□□□ -1.91
RTL8BQ17RB0 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.15□□□□□ -1.91
RTL8BQ17RB0 AC009101.1-201ENST00000568135 242 ntBASIC3.15□□□□□ -1.91
RTL8BQ17RB0 RN7SL600P-201ENST00000581811 299 ntBASIC3.15□□□□□ -1.91
RTL8BQ17RB0 PSMA6P4-201ENST00000603247 718 ntBASIC3.15□□□□□ -1.91
RTL8BQ17RB0 AL354760.1-201ENST00000608357 643 ntBASIC3.15□□□□□ -1.91
RTL8BQ17RB0 MIR6716-201ENST00000613413 80 ntBASIC3.15□□□□□ -1.91
RTL8BQ17RB0 AC091905.1-201ENST00000624400 311 ntBASIC3.15□□□□□ -1.91
RTL8BQ17RB0 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
RTL8BQ17RB0 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.15□□□□□ -1.91
RTL8BQ17RB0 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.15□□□□□ -1.91
RTL8BQ17RB0 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
RTL8BQ17RB0 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
RTL8BQ17RB0 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
RTL8BQ17RB0 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.14□□□□□ -1.91
RTL8BQ17RB0 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
RTL8BQ17RB0 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
RTL8BQ17RB0 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.14□□□□□ -1.91
RTL8BQ17RB0 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RTL8BQ17RB0 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RTL8BQ17RB0 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RTL8BQ17RB0 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RTL8BQ17RB0 RNA5SP130-201ENST00000364431 114 ntBASIC3.14□□□□□ -1.91
RTL8BQ17RB0 SNORA62-201ENST00000365493 153 ntBASIC3.14□□□□□ -1.91
RTL8BQ17RB0 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.14□□□□□ -1.91
RTL8BQ17RB0 RNU6-225P-201ENST00000384613 103 ntBASIC3.14□□□□□ -1.91
RTL8BQ17RB0 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC3.14□□□□□ -1.91
RTL8BQ17RB0 AC093084.1-201ENST00000424233 687 ntBASIC3.14□□□□□ -1.91
RTL8BQ17RB0 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.14□□□□□ -1.91
RTL8BQ17RB0 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC3.14□□□□□ -1.91
RTL8BQ17RB0 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.14□□□□□ -1.91
RTL8BQ17RB0 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.14□□□□□ -1.91
RTL8BQ17RB0 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.14□□□□□ -1.91
RTL8BQ17RB0 RPL5P32-201ENST00000454085 879 ntBASIC3.14□□□□□ -1.91
RTL8BQ17RB0 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.14□□□□□ -1.91
RTL8BQ17RB0 AC011037.1-201ENST00000483964 558 ntBASIC3.14□□□□□ -1.91
RTL8BQ17RB0 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.14□□□□□ -1.91
RTL8BQ17RB0 AC010627.1-201ENST00000503819 1294 ntBASIC3.14□□□□□ -1.91
RTL8BQ17RB0 FTH1P9-201ENST00000513251 355 ntBASIC3.14□□□□□ -1.91
RTL8BQ17RB0 RN7SKP209-201ENST00000516888 304 ntBASIC3.14□□□□□ -1.91
RTL8BQ17RB0 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RTL8BQ17RB0 AC087369.1-201ENST00000520775 996 ntBASIC3.14□□□□□ -1.91
RTL8BQ17RB0 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.14□□□□□ -1.91
RTL8BQ17RB0 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.14□□□□□ -1.91
RTL8BQ17RB0 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.14□□□□□ -1.91
RTL8BQ17RB0 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.14□□□□□ -1.91
RTL8BQ17RB0 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.14□□□□□ -1.91
RTL8BQ17RB0 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.14□□□□□ -1.91
RTL8BQ17RB0 AC090877.1-201ENST00000561418 344 ntBASIC3.14□□□□□ -1.91
RTL8BQ17RB0 AC234775.3-201ENST00000564612 656 ntBASIC3.14□□□□□ -1.91
RTL8BQ17RB0 MIR4458-201ENST00000578872 75 ntBASIC3.14□□□□□ -1.91
RTL8BQ17RB0 ABI1P1-201ENST00000603375 1120 ntBASIC3.14□□□□□ -1.91
RTL8BQ17RB0 AL034351.1-201ENST00000605288 668 ntBASIC3.14□□□□□ -1.91
RTL8BQ17RB0 AL096803.3-201ENST00000609032 532 ntBASIC3.14□□□□□ -1.91
RTL8BQ17RB0 MLECP1-201ENST00000615893 709 ntBASIC3.14□□□□□ -1.91
RTL8BQ17RB0 AC112484.5-201ENST00000624189 228 ntBASIC3.14□□□□□ -1.91
RTL8BQ17RB0 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.14□□□□□ -1.91
RTL8BQ17RB0 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.14□□□□□ -1.91
RTL8BQ17RB0 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RTL8BQ17RB0 AC106871.1-201ENST00000568324 3102 ntBASIC3.14□□□□□ -1.91
RTL8BQ17RB0 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.14□□□□□ -1.91
RTL8BQ17RB0 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
RTL8BQ17RB0 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
RTL8BQ17RB0 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.13□□□□□ -1.91
RTL8BQ17RB0 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RTL8BQ17RB0 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.13□□□□□ -1.91
RTL8BQ17RB0 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms