Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 SNRPCP2-201ENST00000504370 475 ntBASIC4.16□□□□□ -1.74
SCN1BQ07699 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SCN1BQ07699 AC025674.1-201ENST00000507074 324 ntBASIC4.16□□□□□ -1.74
SCN1BQ07699 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.16□□□□□ -1.74
SCN1BQ07699 AC005798.1-201ENST00000513715 387 ntBASIC4.16□□□□□ -1.74
SCN1BQ07699 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.16□□□□□ -1.74
SCN1BQ07699 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.16□□□□□ -1.74
SCN1BQ07699 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC4.16□□□□□ -1.74
SCN1BQ07699 OR8K4P-201ENST00000534608 872 ntBASIC4.16□□□□□ -1.74
SCN1BQ07699 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
SCN1BQ07699 AC015912.2-201ENST00000571053 181 ntBASIC4.16□□□□□ -1.74
SCN1BQ07699 MIR4489-201ENST00000578869 62 ntBASIC4.16□□□□□ -1.74
SCN1BQ07699 MIR3908-201ENST00000579798 126 ntBASIC4.16□□□□□ -1.74
SCN1BQ07699 MIR4310-201ENST00000582950 57 ntBASIC4.16□□□□□ -1.74
SCN1BQ07699 AC008966.2-201ENST00000606157 453 ntBASIC4.16□□□□□ -1.74
SCN1BQ07699 MIR6768-201ENST00000610734 72 ntBASIC4.16□□□□□ -1.74
SCN1BQ07699 AC067931.1-201ENST00000624190 671 ntBASIC4.16□□□□□ -1.74
SCN1BQ07699 AL356121.2-201ENST00000624715 780 ntBASIC4.16□□□□□ -1.74
SCN1BQ07699 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.16□□□□□ -1.74
SCN1BQ07699 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SCN1BQ07699 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
SCN1BQ07699 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SCN1BQ07699 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.16□□□□□ -1.74
SCN1BQ07699 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SCN1BQ07699 MTND5P3-201ENST00000438536 1800 ntBASIC4.16□□□□□ -1.74
SCN1BQ07699 PABPC1P6-201ENST00000445594 1829 ntBASIC4.16□□□□□ -1.74
SCN1BQ07699 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
SCN1BQ07699 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.16□□□□□ -1.74
SCN1BQ07699 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
SCN1BQ07699 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SCN1BQ07699 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
SCN1BQ07699 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
SCN1BQ07699 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
SCN1BQ07699 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
SCN1BQ07699 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
SCN1BQ07699 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
SCN1BQ07699 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
SCN1BQ07699 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
SCN1BQ07699 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.15□□□□□ -1.75
SCN1BQ07699 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.15□□□□□ -1.75
SCN1BQ07699 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SCN1BQ07699 SNURFL-201ENST00000309296 343 ntBASIC4.15□□□□□ -1.75
SCN1BQ07699 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SCN1BQ07699 RNU6-921P-201ENST00000384361 107 ntBASIC4.15□□□□□ -1.75
SCN1BQ07699 MIR513A2-201ENST00000385249 127 ntBASIC4.15□□□□□ -1.75
SCN1BQ07699 Z97832.1-201ENST00000402490 328 ntBASIC4.15□□□□□ -1.75
SCN1BQ07699 AL139098.1-201ENST00000407291 389 ntBASIC4.15□□□□□ -1.75
SCN1BQ07699 SNORA11.3-201ENST00000408471 128 ntBASIC4.15□□□□□ -1.75
SCN1BQ07699 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SCN1BQ07699 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.15□□□□□ -1.75
SCN1BQ07699 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.15□□□□□ -1.75
SCN1BQ07699 BTF3P8-201ENST00000414577 526 ntBASIC4.15□□□□□ -1.75
SCN1BQ07699 AF186996.5-201ENST00000418098 904 ntBASIC4.15□□□□□ -1.75
SCN1BQ07699 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.15□□□□□ -1.75
SCN1BQ07699 DDX39BP1-205ENST00000422507 192 ntBASIC4.15□□□□□ -1.75
SCN1BQ07699 COX6CP15-201ENST00000426313 211 ntBASIC4.15□□□□□ -1.75
SCN1BQ07699 AC096632.1-201ENST00000427395 310 ntBASIC4.15□□□□□ -1.75
SCN1BQ07699 AC114973.1-201ENST00000429057 632 ntBASIC4.15□□□□□ -1.75
SCN1BQ07699 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC4.15□□□□□ -1.75
SCN1BQ07699 TRBV26OR9-2-201ENST00000432077 293 ntBASIC4.15□□□□□ -1.75
SCN1BQ07699 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.15□□□□□ -1.75
SCN1BQ07699 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SCN1BQ07699 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.15□□□□□ -1.75
SCN1BQ07699 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.15□□□□□ -1.75
SCN1BQ07699 AL451050.1-201ENST00000450126 415 ntBASIC4.15□□□□□ -1.75
SCN1BQ07699 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.15□□□□□ -1.75
SCN1BQ07699 AC093270.2-201ENST00000486157 792 ntBASIC4.15□□□□□ -1.75
SCN1BQ07699 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.15□□□□□ -1.75
SCN1BQ07699 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC4.15□□□□□ -1.75
SCN1BQ07699 AC015795.1-201ENST00000513669 327 ntBASIC4.15□□□□□ -1.75
SCN1BQ07699 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.15□□□□□ -1.75
SCN1BQ07699 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.15□□□□□ -1.75
SCN1BQ07699 RNA5SP92-201ENST00000516437 110 ntBASIC4.15□□□□□ -1.75
SCN1BQ07699 snoZ278.1-201ENST00000517059 112 ntBASIC4.15□□□□□ -1.75
SCN1BQ07699 RNU6-709P-201ENST00000517257 104 ntBASIC4.15□□□□□ -1.75
SCN1BQ07699 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.15□□□□□ -1.75
SCN1BQ07699 AC135001.1-201ENST00000544546 283 ntBASIC4.15□□□□□ -1.75
SCN1BQ07699 AC092490.3-201ENST00000545370 572 ntBASIC4.15□□□□□ -1.75
SCN1BQ07699 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
SCN1BQ07699 AC074051.3-201ENST00000570238 358 ntBASIC4.15□□□□□ -1.75
SCN1BQ07699 MIR3691-201ENST00000578066 90 ntBASIC4.15□□□□□ -1.75
SCN1BQ07699 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SCN1BQ07699 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.15□□□□□ -1.75
SCN1BQ07699 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.15□□□□□ -1.75
SCN1BQ07699 AC073091.2-201ENST00000603205 907 ntBASIC4.15□□□□□ -1.75
SCN1BQ07699 AL009028.1-201ENST00000604895 802 ntBASIC4.15□□□□□ -1.75
SCN1BQ07699 AP002802.2-201ENST00000605877 235 ntBASIC4.15□□□□□ -1.75
SCN1BQ07699 AC005014.3-201ENST00000605985 190 ntBASIC4.15□□□□□ -1.75
SCN1BQ07699 HMGN2P28-201ENST00000606102 262 ntBASIC4.15□□□□□ -1.75
SCN1BQ07699 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SCN1BQ07699 EIF3FP1-201ENST00000613970 806 ntBASIC4.15□□□□□ -1.75
SCN1BQ07699 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.15□□□□□ -1.75
SCN1BQ07699 SNORA11.6-201ENST00000619030 128 ntBASIC4.15□□□□□ -1.75
SCN1BQ07699 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
SCN1BQ07699 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.15□□□□□ -1.75
SCN1BQ07699 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.15□□□□□ -1.75
SCN1BQ07699 AC011266.1-201ENST00000624119 3569 ntBASIC4.15□□□□□ -1.75
SCN1BQ07699 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SCN1BQ07699 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SCN1BQ07699 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms