Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 RNU1-85P-201ENST00000364127 164 ntBASIC4.65□□□□□ -1.67
GABPAQ06546 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC4.65□□□□□ -1.67
GABPAQ06546 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
GABPAQ06546 AL359837.1-201ENST00000381357 287 ntBASIC4.65□□□□□ -1.67
GABPAQ06546 U8.11-201ENST00000384699 133 ntBASIC4.65□□□□□ -1.67
GABPAQ06546 U8.12-201ENST00000384701 133 ntBASIC4.65□□□□□ -1.67
GABPAQ06546 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.65□□□□□ -1.67
GABPAQ06546 AL356057.1-202ENST00000402263 756 ntBASIC4.65□□□□□ -1.67
GABPAQ06546 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC4.65□□□□□ -1.67
GABPAQ06546 OR6K4P-201ENST00000423179 955 ntBASIC4.65□□□□□ -1.67
GABPAQ06546 AC018644.1-201ENST00000429934 551 ntBASIC4.65□□□□□ -1.67
GABPAQ06546 MTCO1P54-201ENST00000430139 712 ntBASIC4.65□□□□□ -1.67
GABPAQ06546 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.65□□□□□ -1.67
GABPAQ06546 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC4.65□□□□□ -1.67
GABPAQ06546 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC4.65□□□□□ -1.67
GABPAQ06546 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC4.65□□□□□ -1.67
GABPAQ06546 AL133547.1-201ENST00000448546 220 ntBASIC4.65□□□□□ -1.67
GABPAQ06546 U8.18-201ENST00000459285 133 ntBASIC4.65□□□□□ -1.67
GABPAQ06546 PPBPP1-201ENST00000510807 373 ntBASIC4.65□□□□□ -1.67
GABPAQ06546 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.65□□□□□ -1.67
GABPAQ06546 RN7SKP141-201ENST00000516167 338 ntBASIC4.65□□□□□ -1.67
GABPAQ06546 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC4.65□□□□□ -1.67
GABPAQ06546 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.65□□□□□ -1.67
GABPAQ06546 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.65□□□□□ -1.67
GABPAQ06546 OR8X1P-201ENST00000534542 869 ntBASIC4.65□□□□□ -1.67
GABPAQ06546 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC4.65□□□□□ -1.67
GABPAQ06546 AC087499.8-201ENST00000578406 226 ntBASIC4.65□□□□□ -1.67
GABPAQ06546 OR4H6P-202ENST00000603819 340 ntBASIC4.65□□□□□ -1.67
GABPAQ06546 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.65□□□□□ -1.67
GABPAQ06546 AC095038.2-201ENST00000621464 1070 ntBASIC4.65□□□□□ -1.67
GABPAQ06546 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
GABPAQ06546 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.65□□□□□ -1.67
GABPAQ06546 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
GABPAQ06546 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
GABPAQ06546 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
GABPAQ06546 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.65□□□□□ -1.67
GABPAQ06546 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
GABPAQ06546 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC4.64□□□□□ -1.67
GABPAQ06546 AC006042.3-201ENST00000454684 1469 ntBASIC4.64□□□□□ -1.67
GABPAQ06546 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
GABPAQ06546 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
GABPAQ06546 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
GABPAQ06546 SNORD115-48-201ENST00000364764 76 ntBASIC4.64□□□□□ -1.67
GABPAQ06546 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
GABPAQ06546 RNU6ATAC-201ENST00000408749 126 ntBASIC4.64□□□□□ -1.67
GABPAQ06546 SNORA3C-201ENST00000408792 125 ntBASIC4.64□□□□□ -1.67
GABPAQ06546 GSTM3P2-201ENST00000412746 530 ntBASIC4.64□□□□□ -1.67
GABPAQ06546 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
GABPAQ06546 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC4.64□□□□□ -1.67
GABPAQ06546 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.64□□□□□ -1.67
GABPAQ06546 HIGD1AP4-201ENST00000430194 280 ntBASIC4.64□□□□□ -1.67
GABPAQ06546 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC4.64□□□□□ -1.67
GABPAQ06546 AL035246.1-201ENST00000433554 1255 ntBASIC4.64□□□□□ -1.67
GABPAQ06546 BMS1P19-201ENST00000433925 393 ntBASIC4.64□□□□□ -1.67
GABPAQ06546 AL157827.1-201ENST00000447622 132 ntBASIC4.64□□□□□ -1.67
GABPAQ06546 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC4.64□□□□□ -1.67
GABPAQ06546 SUMO1P1-201ENST00000497904 306 ntBASIC4.64□□□□□ -1.67
GABPAQ06546 SLC25A15P5-201ENST00000508033 253 ntBASIC4.64□□□□□ -1.67
GABPAQ06546 AC006499.6-201ENST00000511169 607 ntBASIC4.64□□□□□ -1.67
GABPAQ06546 AC093853.1-201ENST00000515689 483 ntBASIC4.64□□□□□ -1.67
GABPAQ06546 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC4.64□□□□□ -1.67
GABPAQ06546 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC4.64□□□□□ -1.67
GABPAQ06546 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.64□□□□□ -1.67
GABPAQ06546 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.64□□□□□ -1.67
GABPAQ06546 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.64□□□□□ -1.67
GABPAQ06546 NOP56P3-201ENST00000549457 385 ntBASIC4.64□□□□□ -1.67
GABPAQ06546 CKS1BP1-201ENST00000555221 240 ntBASIC4.64□□□□□ -1.67
GABPAQ06546 HNRNPCP4-201ENST00000571636 900 ntBASIC4.64□□□□□ -1.67
GABPAQ06546 MTND6P33-201ENST00000571794 183 ntBASIC4.64□□□□□ -1.67
GABPAQ06546 AL121834.1-201ENST00000572284 509 ntBASIC4.64□□□□□ -1.67
GABPAQ06546 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC4.64□□□□□ -1.67
GABPAQ06546 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.64□□□□□ -1.67
GABPAQ06546 MTCO3P22-201ENST00000603219 784 ntBASIC4.64□□□□□ -1.67
GABPAQ06546 AC112230.1-201ENST00000604342 547 ntBASIC4.64□□□□□ -1.67
GABPAQ06546 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
GABPAQ06546 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
GABPAQ06546 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.64□□□□□ -1.67
GABPAQ06546 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
GABPAQ06546 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
GABPAQ06546 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
GABPAQ06546 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
GABPAQ06546 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.63□□□□□ -1.67
GABPAQ06546 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
GABPAQ06546 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
GABPAQ06546 MAPK10-349ENST00000641767 3661 ntBASIC4.63□□□□□ -1.67
GABPAQ06546 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
GABPAQ06546 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.63□□□□□ -1.67
GABPAQ06546 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.63□□□□□ -1.67
GABPAQ06546 MIR23B-201ENST00000384832 97 ntBASIC4.63□□□□□ -1.67
GABPAQ06546 RNA5SP171-201ENST00000391071 115 ntBASIC4.63□□□□□ -1.67
GABPAQ06546 Z86062.1-201ENST00000406773 777 ntBASIC4.63□□□□□ -1.67
GABPAQ06546 RN7SKP247-201ENST00000411094 308 ntBASIC4.63□□□□□ -1.67
GABPAQ06546 RAB9AP3-201ENST00000412737 573 ntBASIC4.63□□□□□ -1.67
GABPAQ06546 RANP4-201ENST00000413361 655 ntBASIC4.63□□□□□ -1.67
GABPAQ06546 DYNLL1P7-201ENST00000429273 258 ntBASIC4.63□□□□□ -1.67
GABPAQ06546 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.63□□□□□ -1.67
GABPAQ06546 ARL4AP4-201ENST00000434170 518 ntBASIC4.63□□□□□ -1.67
GABPAQ06546 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
GABPAQ06546 AC092447.2-201ENST00000435487 669 ntBASIC4.63□□□□□ -1.67
GABPAQ06546 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 145.9 ms