Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
RPL39P62891 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
RPL39P62891 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
RPL39P62891 RFX3-203ENST00000381984 364 ntTSL 3 BASIC2.47□□□□□ -2.01
RPL39P62891 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC2.47□□□□□ -2.01
RPL39P62891 AC093578.1-201ENST00000415219 368 ntBASIC2.47□□□□□ -2.01
RPL39P62891 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC2.47□□□□□ -2.01
RPL39P62891 RPL23AP82-202ENST00000427528 469 ntBASIC2.47□□□□□ -2.01
RPL39P62891 CCNB1IP1P2-201ENST00000432876 818 ntBASIC2.47□□□□□ -2.01
RPL39P62891 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC2.47□□□□□ -2.01
RPL39P62891 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC2.47□□□□□ -2.01
RPL39P62891 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC2.47□□□□□ -2.01
RPL39P62891 RNU7-170P-201ENST00000459303 61 ntBASIC2.47□□□□□ -2.01
RPL39P62891 CENPBD1P1-201ENST00000464061 469 ntBASIC2.47□□□□□ -2.01
RPL39P62891 AC006511.1-201ENST00000470614 315 ntBASIC2.47□□□□□ -2.01
RPL39P62891 RN7SL459P-201ENST00000481078 302 ntBASIC2.47□□□□□ -2.01
RPL39P62891 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC2.47□□□□□ -2.01
RPL39P62891 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC2.47□□□□□ -2.01
RPL39P62891 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC2.47□□□□□ -2.01
RPL39P62891 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC2.47□□□□□ -2.01
RPL39P62891 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC2.47□□□□□ -2.01
RPL39P62891 RNU4ATAC15P-201ENST00000516415 126 ntBASIC2.47□□□□□ -2.01
RPL39P62891 AC107934.2-201ENST00000518653 310 ntBASIC2.47□□□□□ -2.01
RPL39P62891 IGHV3-32-201ENST00000519182 355 ntBASIC2.47□□□□□ -2.01
RPL39P62891 STX3-204ENST00000530221 534 ntTSL 5 BASIC2.47□□□□□ -2.01
RPL39P62891 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC2.47□□□□□ -2.01
RPL39P62891 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC2.47□□□□□ -2.01
RPL39P62891 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC2.47□□□□□ -2.01
RPL39P62891 MIR3939-201ENST00000582614 106 ntBASIC2.47□□□□□ -2.01
RPL39P62891 NPM1P45-201ENST00000583151 559 ntBASIC2.47□□□□□ -2.01
RPL39P62891 KPNA2P3-201ENST00000584190 848 ntBASIC2.47□□□□□ -2.01
RPL39P62891 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC2.47□□□□□ -2.01
RPL39P62891 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC2.47□□□□□ -2.01
RPL39P62891 TEX41-238ENST00000604253 709 ntTSL 5 BASIC2.47□□□□□ -2.01
RPL39P62891 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC2.47□□□□□ -2.01
RPL39P62891 AC004948.1-201ENST00000609858 672 ntBASIC2.47□□□□□ -2.01
RPL39P62891 FP236240.3-201ENST00000623061 327 ntBASIC2.47□□□□□ -2.01
RPL39P62891 AC110801.1-201ENST00000623590 212 ntBASIC2.47□□□□□ -2.01
RPL39P62891 AC112484.5-201ENST00000624189 228 ntBASIC2.47□□□□□ -2.01
RPL39P62891 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC2.47□□□□□ -2.01
RPL39P62891 OR52H1-202ENST00000641796 1061 ntBASIC2.47□□□□□ -2.01
RPL39P62891 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
RPL39P62891 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
RPL39P62891 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC2.47□□□□□ -2.01
RPL39P62891 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC2.47□□□□□ -2.01
RPL39P62891 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
RPL39P62891 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
RPL39P62891 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
RPL39P62891 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
RPL39P62891 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
RPL39P62891 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC2.46□□□□□ -2.01
RPL39P62891 AL133412.1-201ENST00000380194 2992 ntBASIC2.46□□□□□ -2.01
RPL39P62891 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC2.46□□□□□ -2.02
RPL39P62891 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
RPL39P62891 AC007685.1-201ENST00000329806 452 ntBASIC2.46□□□□□ -2.02
RPL39P62891 RNU6-213P-201ENST00000384051 104 ntBASIC2.46□□□□□ -2.02
RPL39P62891 AC007068.1-201ENST00000396690 844 ntBASIC2.46□□□□□ -2.02
RPL39P62891 RPL7P60-201ENST00000397636 735 ntBASIC2.46□□□□□ -2.02
RPL39P62891 AL022722.2-201ENST00000402519 180 ntBASIC2.46□□□□□ -2.02
RPL39P62891 RPS4XP9-201ENST00000405151 780 ntBASIC2.46□□□□□ -2.02
RPL39P62891 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC2.46□□□□□ -2.02
RPL39P62891 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC2.46□□□□□ -2.02
RPL39P62891 AC245054.1-201ENST00000420944 258 ntBASIC2.46□□□□□ -2.02
RPL39P62891 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC2.46□□□□□ -2.02
RPL39P62891 AP000907.1-201ENST00000428428 510 ntBASIC2.46□□□□□ -2.02
RPL39P62891 BTG3P1-201ENST00000435859 716 ntBASIC2.46□□□□□ -2.02
RPL39P62891 AC105402.2-201ENST00000438503 358 ntBASIC2.46□□□□□ -2.02
RPL39P62891 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC2.46□□□□□ -2.02
RPL39P62891 AC125238.1-201ENST00000448842 249 ntBASIC2.46□□□□□ -2.02
RPL39P62891 AL162388.1-201ENST00000450912 352 ntBASIC2.46□□□□□ -2.02
RPL39P62891 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
RPL39P62891 RPS29P33-201ENST00000456717 146 ntBASIC2.46□□□□□ -2.02
RPL39P62891 RN7SL594P-201ENST00000470590 287 ntBASIC2.46□□□□□ -2.02
RPL39P62891 AC007686.1-201ENST00000488511 463 ntBASIC2.46□□□□□ -2.02
RPL39P62891 RPL7P47-201ENST00000497299 556 ntBASIC2.46□□□□□ -2.02
RPL39P62891 SETP14-201ENST00000497538 873 ntBASIC2.46□□□□□ -2.02
RPL39P62891 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC2.46□□□□□ -2.02
RPL39P62891 FTH1P21-201ENST00000512179 511 ntBASIC2.46□□□□□ -2.02
RPL39P62891 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC2.46□□□□□ -2.02
RPL39P62891 MTHFD2P4-201ENST00000515074 1025 ntBASIC2.46□□□□□ -2.02
RPL39P62891 SNORA64.4-201ENST00000516632 81 ntBASIC2.46□□□□□ -2.02
RPL39P62891 RN7SKP289-201ENST00000517244 295 ntBASIC2.46□□□□□ -2.02
RPL39P62891 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC2.46□□□□□ -2.02
RPL39P62891 PTS-202ENST00000524931 696 ntTSL 3 BASIC2.46□□□□□ -2.02
RPL39P62891 AC006518.1-201ENST00000541449 943 ntBASIC2.46□□□□□ -2.02
RPL39P62891 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
RPL39P62891 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC2.46□□□□□ -2.02
RPL39P62891 MIR3186-201ENST00000577404 85 ntBASIC2.46□□□□□ -2.02
RPL39P62891 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC2.46□□□□□ -2.02
RPL39P62891 AC005255.1-201ENST00000593748 216 ntBASIC2.46□□□□□ -2.02
RPL39P62891 AL606490.9-201ENST00000603331 271 ntBASIC2.46□□□□□ -2.02
RPL39P62891 AC087468.1-201ENST00000604365 630 ntBASIC2.46□□□□□ -2.02
RPL39P62891 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC2.46□□□□□ -2.02
RPL39P62891 uc_338.32-201ENST00000615087 172 ntBASIC2.46□□□□□ -2.02
RPL39P62891 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC2.46□□□□□ -2.02
RPL39P62891 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC2.46□□□□□ -2.02
RPL39P62891 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
RPL39P62891 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
RPL39P62891 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC2.46□□□□□ -2.02
RPL39P62891 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms