Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 RNU6-488P-201ENST00000515918 99 ntBASIC4.91□□□□□ -1.62
CLRN1P58418 RNU6-347P-201ENST00000516658 105 ntBASIC4.91□□□□□ -1.62
CLRN1P58418 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC4.91□□□□□ -1.62
CLRN1P58418 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.91□□□□□ -1.62
CLRN1P58418 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.91□□□□□ -1.62
CLRN1P58418 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC4.91□□□□□ -1.62
CLRN1P58418 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC4.91□□□□□ -1.62
CLRN1P58418 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC4.91□□□□□ -1.62
CLRN1P58418 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.91□□□□□ -1.62
CLRN1P58418 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.91□□□□□ -1.62
CLRN1P58418 AC109347.2-201ENST00000610220 349 ntBASIC4.91□□□□□ -1.62
CLRN1P58418 AL121890.2-201ENST00000617644 465 ntBASIC4.91□□□□□ -1.62
CLRN1P58418 uc_338.7-201ENST00000621834 124 ntBASIC4.91□□□□□ -1.62
CLRN1P58418 CR392039.4-201ENST00000624968 501 ntBASIC4.91□□□□□ -1.62
CLRN1P58418 OR5AK4P-201ENST00000635912 903 ntBASIC4.91□□□□□ -1.62
CLRN1P58418 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC4.91□□□□□ -1.62
CLRN1P58418 AC134882.1-201ENST00000603738 1676 ntBASIC4.91□□□□□ -1.62
CLRN1P58418 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC4.91□□□□□ -1.62
CLRN1P58418 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CLRN1P58418 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CLRN1P58418 GDI2P1-201ENST00000429312 1336 ntBASIC4.91□□□□□ -1.62
CLRN1P58418 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC4.91□□□□□ -1.62
CLRN1P58418 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
CLRN1P58418 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC4.91□□□□□ -1.62
CLRN1P58418 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CLRN1P58418 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CLRN1P58418 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CLRN1P58418 AC016745.2-201ENST00000608834 3443 ntBASIC4.9□□□□□ -1.62
CLRN1P58418 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CLRN1P58418 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CLRN1P58418 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CLRN1P58418 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.62
CLRN1P58418 AL022322.2-201ENST00000624072 20397 ntBASIC4.9□□□□□ -1.62
CLRN1P58418 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CLRN1P58418 LINC01963-201ENST00000562038 3148 ntBASIC4.9□□□□□ -1.63
CLRN1P58418 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
CLRN1P58418 RN7SKP145-201ENST00000363291 303 ntBASIC4.9□□□□□ -1.63
CLRN1P58418 RNU6-867P-201ENST00000364956 107 ntBASIC4.9□□□□□ -1.63
CLRN1P58418 RNU4-2-201ENST00000365668 141 ntBASIC4.9□□□□□ -1.63
CLRN1P58418 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
CLRN1P58418 RNU1-149P-201ENST00000390870 161 ntBASIC4.9□□□□□ -1.63
CLRN1P58418 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
CLRN1P58418 VN1R8P-201ENST00000407739 893 ntBASIC4.9□□□□□ -1.63
CLRN1P58418 AIMP1P1-201ENST00000418670 937 ntBASIC4.9□□□□□ -1.63
CLRN1P58418 AC093155.2-201ENST00000420734 937 ntBASIC4.9□□□□□ -1.63
CLRN1P58418 AC007161.1-204ENST00000423039 460 ntBASIC4.9□□□□□ -1.63
CLRN1P58418 OR8F1P-201ENST00000425243 930 ntBASIC4.9□□□□□ -1.63
CLRN1P58418 ISCA1P1-201ENST00000426679 387 ntBASIC4.9□□□□□ -1.63
CLRN1P58418 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CLRN1P58418 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC4.9□□□□□ -1.63
CLRN1P58418 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.9□□□□□ -1.63
CLRN1P58418 RPL37P21-201ENST00000435890 276 ntBASIC4.9□□□□□ -1.63
CLRN1P58418 UBE2V1P8-201ENST00000437166 265 ntBASIC4.9□□□□□ -1.63
CLRN1P58418 RPS10P18-201ENST00000442662 495 ntBASIC4.9□□□□□ -1.63
CLRN1P58418 AC244505.5-201ENST00000443639 207 ntBASIC4.9□□□□□ -1.63
CLRN1P58418 RPL36AP39-201ENST00000445859 318 ntBASIC4.9□□□□□ -1.63
CLRN1P58418 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.9□□□□□ -1.63
CLRN1P58418 AC022431.1-201ENST00000450941 438 ntBASIC4.9□□□□□ -1.63
CLRN1P58418 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC4.9□□□□□ -1.63
CLRN1P58418 MEMO1P3-201ENST00000459811 302 ntBASIC4.9□□□□□ -1.63
CLRN1P58418 AC097493.1-201ENST00000463958 372 ntBASIC4.9□□□□□ -1.63
CLRN1P58418 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.63
CLRN1P58418 MTCO3P38-201ENST00000468910 766 ntBASIC4.9□□□□□ -1.63
CLRN1P58418 AC007998.1-201ENST00000474156 672 ntBASIC4.9□□□□□ -1.63
CLRN1P58418 AC004924.1-201ENST00000480160 781 ntBASIC4.9□□□□□ -1.63
CLRN1P58418 AC023424.2-201ENST00000493479 777 ntBASIC4.9□□□□□ -1.63
CLRN1P58418 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC4.9□□□□□ -1.63
CLRN1P58418 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.9□□□□□ -1.63
CLRN1P58418 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC4.9□□□□□ -1.63
CLRN1P58418 AC006499.2-201ENST00000513470 337 ntBASIC4.9□□□□□ -1.63
CLRN1P58418 ARL2BPP5-201ENST00000523141 481 ntBASIC4.9□□□□□ -1.63
CLRN1P58418 EIF4A2P5-201ENST00000529914 499 ntBASIC4.9□□□□□ -1.63
CLRN1P58418 DEFB108A-201ENST00000530110 222 ntBASIC4.9□□□□□ -1.63
CLRN1P58418 AC027026.1-201ENST00000532323 742 ntBASIC4.9□□□□□ -1.63
CLRN1P58418 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC4.9□□□□□ -1.63
CLRN1P58418 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.9□□□□□ -1.63
CLRN1P58418 AL358913.1-201ENST00000554342 121 ntBASIC4.9□□□□□ -1.63
CLRN1P58418 SERPINE4P-201ENST00000554978 281 ntBASIC4.9□□□□□ -1.63
CLRN1P58418 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC4.9□□□□□ -1.63
CLRN1P58418 AC068714.1-201ENST00000559623 800 ntBASIC4.9□□□□□ -1.63
CLRN1P58418 AP005403.1-201ENST00000579720 229 ntBASIC4.9□□□□□ -1.63
CLRN1P58418 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.9□□□□□ -1.63
CLRN1P58418 MRO-208ENST00000588444 866 ntTSL 3 BASIC4.9□□□□□ -1.63
CLRN1P58418 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC4.9□□□□□ -1.63
CLRN1P58418 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.9□□□□□ -1.63
CLRN1P58418 HCG18-243ENST00000602498 327 ntTSL 3 BASIC4.9□□□□□ -1.63
CLRN1P58418 AF250324.2-201ENST00000608299 610 ntBASIC4.9□□□□□ -1.63
CLRN1P58418 U4.5-201ENST00000617137 123 ntBASIC4.9□□□□□ -1.63
CLRN1P58418 AC093591.3-201ENST00000634516 308 ntBASIC4.9□□□□□ -1.63
CLRN1P58418 MIR1910-201ENST00000636955 80 ntBASIC4.9□□□□□ -1.63
CLRN1P58418 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC4.9□□□□□ -1.63
CLRN1P58418 OR13C1P-202ENST00000641378 2919 ntBASIC4.9□□□□□ -1.63
CLRN1P58418 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CLRN1P58418 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CLRN1P58418 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
CLRN1P58418 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
CLRN1P58418 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CLRN1P58418 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.9□□□□□ -1.63
CLRN1P58418 LINC02019-201ENST00000608605 2060 ntBASIC4.9□□□□□ -1.63
CLRN1P58418 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 134.1 ms