Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.97□□□□□ -1.61
RIPK4P57078 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.97□□□□□ -1.61
RIPK4P57078 AL390816.3-201ENST00000604527 1066 ntBASIC4.97□□□□□ -1.61
RIPK4P57078 RNU1-30P-201ENST00000606575 163 ntBASIC4.97□□□□□ -1.61
RIPK4P57078 AL354760.1-201ENST00000608357 643 ntBASIC4.97□□□□□ -1.61
RIPK4P57078 AC039056.2-201ENST00000622261 511 ntBASIC4.97□□□□□ -1.61
RIPK4P57078 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
RIPK4P57078 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RIPK4P57078 AC093535.2-201ENST00000624769 2326 ntBASIC4.97□□□□□ -1.61
RIPK4P57078 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
RIPK4P57078 RPL7P60-201ENST00000397636 735 ntBASIC4.96□□□□□ -1.62
RIPK4P57078 AL512430.2-201ENST00000406786 339 ntBASIC4.96□□□□□ -1.62
RIPK4P57078 Z98941.1-201ENST00000407764 100 ntBASIC4.96□□□□□ -1.62
RIPK4P57078 RAB9AP3-201ENST00000412737 573 ntBASIC4.96□□□□□ -1.62
RIPK4P57078 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RIPK4P57078 CYP4F29P-201ENST00000420685 446 ntBASIC4.96□□□□□ -1.62
RIPK4P57078 AF228730.2-201ENST00000438784 848 ntBASIC4.96□□□□□ -1.62
RIPK4P57078 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.96□□□□□ -1.62
RIPK4P57078 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.96□□□□□ -1.62
RIPK4P57078 RAB9AP1-201ENST00000449393 573 ntBASIC4.96□□□□□ -1.62
RIPK4P57078 TRBV8-1-201ENST00000481590 279 ntBASIC4.96□□□□□ -1.62
RIPK4P57078 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.96□□□□□ -1.62
RIPK4P57078 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.96□□□□□ -1.62
RIPK4P57078 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.96□□□□□ -1.62
RIPK4P57078 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.96□□□□□ -1.62
RIPK4P57078 AP001542.1-201ENST00000591314 200 ntBASIC4.96□□□□□ -1.62
RIPK4P57078 AC010615.3-201ENST00000597319 394 ntBASIC4.96□□□□□ -1.62
RIPK4P57078 AC244505.7-201ENST00000599675 272 ntBASIC4.96□□□□□ -1.62
RIPK4P57078 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC4.96□□□□□ -1.62
RIPK4P57078 AC112230.1-201ENST00000604342 547 ntBASIC4.96□□□□□ -1.62
RIPK4P57078 AL137849.1-201ENST00000604767 169 ntBASIC4.96□□□□□ -1.62
RIPK4P57078 AP003392.5-201ENST00000607857 415 ntBASIC4.96□□□□□ -1.62
RIPK4P57078 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.96□□□□□ -1.62
RIPK4P57078 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
RIPK4P57078 OR11H5P-202ENST00000641612 1325 ntBASIC4.96□□□□□ -1.62
RIPK4P57078 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RIPK4P57078 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RIPK4P57078 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RIPK4P57078 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.95□□□□□ -1.62
RIPK4P57078 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RIPK4P57078 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
RIPK4P57078 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
RIPK4P57078 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.95□□□□□ -1.62
RIPK4P57078 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.95□□□□□ -1.62
RIPK4P57078 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.95□□□□□ -1.62
RIPK4P57078 AC019155.1-201ENST00000382242 574 ntBASIC4.95□□□□□ -1.62
RIPK4P57078 SNORD3H-201ENST00000384486 214 ntBASIC4.95□□□□□ -1.62
RIPK4P57078 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.95□□□□□ -1.62
RIPK4P57078 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.95□□□□□ -1.62
RIPK4P57078 AL035246.1-201ENST00000433554 1255 ntBASIC4.95□□□□□ -1.62
RIPK4P57078 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.95□□□□□ -1.62
RIPK4P57078 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC4.95□□□□□ -1.62
RIPK4P57078 SNORA84-201ENST00000459229 133 ntBASIC4.95□□□□□ -1.62
RIPK4P57078 ACTR3P3-201ENST00000480448 893 ntBASIC4.95□□□□□ -1.62
RIPK4P57078 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC4.95□□□□□ -1.62
RIPK4P57078 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC4.95□□□□□ -1.62
RIPK4P57078 MTCO3P42-201ENST00000509488 518 ntBASIC4.95□□□□□ -1.62
RIPK4P57078 MTCO3P39-201ENST00000514812 518 ntBASIC4.95□□□□□ -1.62
RIPK4P57078 AC008802.1-201ENST00000519121 791 ntBASIC4.95□□□□□ -1.62
RIPK4P57078 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.95□□□□□ -1.62
RIPK4P57078 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RIPK4P57078 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.95□□□□□ -1.62
RIPK4P57078 AC025423.2-201ENST00000537570 439 ntBASIC4.95□□□□□ -1.62
RIPK4P57078 MIR1254-2-201ENST00000579553 63 ntBASIC4.95□□□□□ -1.62
RIPK4P57078 MIR5187-201ENST00000583479 76 ntBASIC4.95□□□□□ -1.62
RIPK4P57078 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RIPK4P57078 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.95□□□□□ -1.62
RIPK4P57078 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.95□□□□□ -1.62
RIPK4P57078 AC093311.1-201ENST00000506586 2021 ntBASIC4.95□□□□□ -1.62
RIPK4P57078 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RIPK4P57078 ASNSP1-204ENST00000641977 1664 ntBASIC4.95□□□□□ -1.62
RIPK4P57078 PNPT1P2-201ENST00000456768 2050 ntBASIC4.95□□□□□ -1.62
RIPK4P57078 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.95□□□□□ -1.62
RIPK4P57078 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RIPK4P57078 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RIPK4P57078 AL589994.1-201ENST00000404962 340 ntBASIC4.94□□□□□ -1.62
RIPK4P57078 RNU6ATAC-201ENST00000408749 126 ntBASIC4.94□□□□□ -1.62
RIPK4P57078 TCEA1P2-201ENST00000420496 906 ntBASIC4.94□□□□□ -1.62
RIPK4P57078 AL390879.2-203ENST00000426943 1121 ntBASIC4.94□□□□□ -1.62
RIPK4P57078 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.94□□□□□ -1.62
RIPK4P57078 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC4.94□□□□□ -1.62
RIPK4P57078 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RIPK4P57078 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC4.94□□□□□ -1.62
RIPK4P57078 HMGB1P16-201ENST00000447155 540 ntBASIC4.94□□□□□ -1.62
RIPK4P57078 TRBV12-2-201ENST00000489763 344 ntBASIC4.94□□□□□ -1.62
RIPK4P57078 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.94□□□□□ -1.62
RIPK4P57078 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.94□□□□□ -1.62
RIPK4P57078 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.94□□□□□ -1.62
RIPK4P57078 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.94□□□□□ -1.62
RIPK4P57078 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.94□□□□□ -1.62
RIPK4P57078 CR392039.5-201ENST00000623201 510 ntBASIC4.94□□□□□ -1.62
RIPK4P57078 AC012442.3-202ENST00000636742 206 ntBASIC4.94□□□□□ -1.62
RIPK4P57078 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RIPK4P57078 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RIPK4P57078 CR382285.2-201ENST00000624662 1495 ntBASIC4.94□□□□□ -1.62
RIPK4P57078 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.94□□□□□ -1.62
RIPK4P57078 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RIPK4P57078 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.93□□□□□ -1.62
RIPK4P57078 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
RIPK4P57078 MIR3074-201ENST00000384885 81 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 144.5 ms