Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PKNOX1P55347 IPO8P1-201ENST00000455509 3109 ntBASIC3.94□□□□□ -1.78
PKNOX1P55347 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.94□□□□□ -1.78
PKNOX1P55347 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
PKNOX1P55347 RNA5SP366-201ENST00000365454 123 ntBASIC3.94□□□□□ -1.78
PKNOX1P55347 RNU6-185P-201ENST00000384421 107 ntBASIC3.94□□□□□ -1.78
PKNOX1P55347 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
PKNOX1P55347 MTND3P20-201ENST00000407663 186 ntBASIC3.94□□□□□ -1.78
PKNOX1P55347 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PKNOX1P55347 NPM1P24-201ENST00000428039 894 ntBASIC3.94□□□□□ -1.78
PKNOX1P55347 BRWD1P3-201ENST00000428816 390 ntBASIC3.94□□□□□ -1.78
PKNOX1P55347 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC3.94□□□□□ -1.78
PKNOX1P55347 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC3.94□□□□□ -1.78
PKNOX1P55347 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC3.94□□□□□ -1.78
PKNOX1P55347 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC3.94□□□□□ -1.78
PKNOX1P55347 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC3.94□□□□□ -1.78
PKNOX1P55347 RPL7P48-201ENST00000461513 746 ntBASIC3.94□□□□□ -1.78
PKNOX1P55347 RN7SL303P-201ENST00000469773 251 ntBASIC3.94□□□□□ -1.78
PKNOX1P55347 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC3.94□□□□□ -1.78
PKNOX1P55347 AC025674.1-201ENST00000507074 324 ntBASIC3.94□□□□□ -1.78
PKNOX1P55347 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.94□□□□□ -1.78
PKNOX1P55347 IGHV3-32-201ENST00000519182 355 ntBASIC3.94□□□□□ -1.78
PKNOX1P55347 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC3.94□□□□□ -1.78
PKNOX1P55347 HAUS1P3-201ENST00000523909 662 ntBASIC3.94□□□□□ -1.78
PKNOX1P55347 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
PKNOX1P55347 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC3.94□□□□□ -1.78
PKNOX1P55347 CBX3P5-201ENST00000552017 521 ntBASIC3.94□□□□□ -1.78
PKNOX1P55347 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC3.94□□□□□ -1.78
PKNOX1P55347 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC3.94□□□□□ -1.78
PKNOX1P55347 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.94□□□□□ -1.78
PKNOX1P55347 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.94□□□□□ -1.78
PKNOX1P55347 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.94□□□□□ -1.78
PKNOX1P55347 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.94□□□□□ -1.78
PKNOX1P55347 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.94□□□□□ -1.78
PKNOX1P55347 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PKNOX1P55347 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC3.94□□□□□ -1.78
PKNOX1P55347 AL627171.1-201ENST00000618845 1308 ntBASIC3.94□□□□□ -1.78
PKNOX1P55347 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.94□□□□□ -1.78
PKNOX1P55347 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PKNOX1P55347 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PKNOX1P55347 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.93□□□□□ -1.78
PKNOX1P55347 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.93□□□□□ -1.78
PKNOX1P55347 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PKNOX1P55347 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PKNOX1P55347 RNA5SP509-201ENST00000364577 119 ntBASIC3.93□□□□□ -1.78
PKNOX1P55347 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PKNOX1P55347 CYB5AP4-201ENST00000396692 399 ntBASIC3.93□□□□□ -1.78
PKNOX1P55347 AL161909.1-201ENST00000397390 712 ntBASIC3.93□□□□□ -1.78
PKNOX1P55347 RNU4-74P-201ENST00000411280 161 ntBASIC3.93□□□□□ -1.78
PKNOX1P55347 AC010385.1-201ENST00000412374 256 ntBASIC3.93□□□□□ -1.78
PKNOX1P55347 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.93□□□□□ -1.78
PKNOX1P55347 CHIAP3-201ENST00000423668 1133 ntBASIC3.93□□□□□ -1.78
PKNOX1P55347 AC009965.2-201ENST00000425328 970 ntBASIC3.93□□□□□ -1.78
PKNOX1P55347 MTND4LP14-201ENST00000429447 288 ntBASIC3.93□□□□□ -1.78
PKNOX1P55347 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PKNOX1P55347 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.93□□□□□ -1.78
PKNOX1P55347 RPL7P28-201ENST00000437739 740 ntBASIC3.93□□□□□ -1.78
PKNOX1P55347 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.93□□□□□ -1.78
PKNOX1P55347 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PKNOX1P55347 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.93□□□□□ -1.78
PKNOX1P55347 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC3.93□□□□□ -1.78
PKNOX1P55347 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC3.93□□□□□ -1.78
PKNOX1P55347 RPS15AP29-201ENST00000445539 400 ntBASIC3.93□□□□□ -1.78
PKNOX1P55347 MTND5P8-201ENST00000449817 1083 ntBASIC3.93□□□□□ -1.78
PKNOX1P55347 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC3.93□□□□□ -1.78
PKNOX1P55347 HMGB3P21-201ENST00000452483 547 ntBASIC3.93□□□□□ -1.78
PKNOX1P55347 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC3.93□□□□□ -1.78
PKNOX1P55347 FABP3P2-201ENST00000453169 399 ntBASIC3.93□□□□□ -1.78
PKNOX1P55347 NDUFA12P1-201ENST00000455914 406 ntBASIC3.93□□□□□ -1.78
PKNOX1P55347 RPL38P1-201ENST00000460914 211 ntBASIC3.93□□□□□ -1.78
PKNOX1P55347 RPL21P71-201ENST00000465598 459 ntBASIC3.93□□□□□ -1.78
PKNOX1P55347 AC011276.1-201ENST00000469688 323 ntBASIC3.93□□□□□ -1.78
PKNOX1P55347 RN7SL481P-201ENST00000477764 299 ntBASIC3.93□□□□□ -1.78
PKNOX1P55347 AC041039.1-201ENST00000485656 536 ntBASIC3.93□□□□□ -1.78
PKNOX1P55347 AC106872.2-201ENST00000494303 480 ntBASIC3.93□□□□□ -1.78
PKNOX1P55347 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.93□□□□□ -1.78
PKNOX1P55347 BTF3L4P4-201ENST00000506381 449 ntBASIC3.93□□□□□ -1.78
PKNOX1P55347 AC020593.1-201ENST00000507399 299 ntBASIC3.93□□□□□ -1.78
PKNOX1P55347 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC3.93□□□□□ -1.78
PKNOX1P55347 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PKNOX1P55347 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.93□□□□□ -1.78
PKNOX1P55347 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.93□□□□□ -1.78
PKNOX1P55347 AC025627.2-201ENST00000576220 160 ntBASIC3.93□□□□□ -1.78
PKNOX1P55347 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.93□□□□□ -1.78
PKNOX1P55347 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.93□□□□□ -1.78
PKNOX1P55347 AC055764.2-201ENST00000610089 670 ntBASIC3.93□□□□□ -1.78
PKNOX1P55347 uc_338.32-201ENST00000615087 172 ntBASIC3.93□□□□□ -1.78
PKNOX1P55347 MIR7151-201ENST00000617477 60 ntBASIC3.93□□□□□ -1.78
PKNOX1P55347 AP004607.9-201ENST00000618202 316 ntBASIC3.93□□□□□ -1.78
PKNOX1P55347 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.93□□□□□ -1.78
PKNOX1P55347 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC3.93□□□□□ -1.78
PKNOX1P55347 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC3.93□□□□□ -1.78
PKNOX1P55347 AC007529.1-201ENST00000418574 2178 ntBASIC3.93□□□□□ -1.78
PKNOX1P55347 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.93□□□□□ -1.78
PKNOX1P55347 AC139713.2-214ENST00000642059 1811 ntBASIC3.93□□□□□ -1.78
PKNOX1P55347 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.93□□□□□ -1.78
PKNOX1P55347 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.93□□□□□ -1.78
PKNOX1P55347 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
PKNOX1P55347 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.93□□□□□ -1.78
PKNOX1P55347 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms