Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.85□□□□□ -1.79
BRCA2P51587 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.85□□□□□ -1.79
BRCA2P51587 AC091826.1-201ENST00000514065 313 ntBASIC3.85□□□□□ -1.79
BRCA2P51587 snoU109.6-201ENST00000516831 118 ntBASIC3.85□□□□□ -1.79
BRCA2P51587 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
BRCA2P51587 AC097505.1-201ENST00000610199 565 ntBASIC3.85□□□□□ -1.79
BRCA2P51587 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
BRCA2P51587 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
BRCA2P51587 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
BRCA2P51587 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
BRCA2P51587 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
BRCA2P51587 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
BRCA2P51587 MIR422A-201ENST00000362286 90 ntBASIC3.85□□□□□ -1.79
BRCA2P51587 AL138885.1-201ENST00000405921 675 ntBASIC3.85□□□□□ -1.79
BRCA2P51587 HMGB1P18-201ENST00000438801 619 ntBASIC3.85□□□□□ -1.79
BRCA2P51587 SLC31A1P1-201ENST00000451221 567 ntBASIC3.85□□□□□ -1.79
BRCA2P51587 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.85□□□□□ -1.79
BRCA2P51587 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
BRCA2P51587 RPS3AP43-201ENST00000479743 781 ntBASIC3.85□□□□□ -1.79
BRCA2P51587 AC010374.2-201ENST00000512933 535 ntBASIC3.85□□□□□ -1.79
BRCA2P51587 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
BRCA2P51587 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC3.84□□□□□ -1.79
BRCA2P51587 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
BRCA2P51587 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.79
BRCA2P51587 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC3.84□□□□□ -1.79
BRCA2P51587 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
BRCA2P51587 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC3.84□□□□□ -1.79
BRCA2P51587 RPS4XP8-201ENST00000402039 771 ntBASIC3.84□□□□□ -1.79
BRCA2P51587 RPL7AP73-201ENST00000413490 353 ntBASIC3.84□□□□□ -1.79
BRCA2P51587 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.84□□□□□ -1.79
BRCA2P51587 AL513124.1-201ENST00000450410 614 ntBASIC3.84□□□□□ -1.79
BRCA2P51587 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.84□□□□□ -1.79
BRCA2P51587 AC018442.3-201ENST00000523025 183 ntBASIC3.84□□□□□ -1.79
BRCA2P51587 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.84□□□□□ -1.79
BRCA2P51587 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
BRCA2P51587 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC3.84□□□□□ -1.79
BRCA2P51587 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.84□□□□□ -1.79
BRCA2P51587 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.84□□□□□ -1.79
BRCA2P51587 MIR7843-201ENST00000622274 79 ntBASIC3.84□□□□□ -1.79
BRCA2P51587 AC010149.2-201ENST00000637608 315 ntBASIC3.84□□□□□ -1.79
BRCA2P51587 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
BRCA2P51587 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
BRCA2P51587 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
BRCA2P51587 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
BRCA2P51587 AC138393.1-206ENST00000540997 1886 ntBASIC3.84□□□□□ -1.79
BRCA2P51587 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
BRCA2P51587 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC3.84□□□□□ -1.79
BRCA2P51587 RNU1-70P-201ENST00000362618 164 ntBASIC3.84□□□□□ -1.8
BRCA2P51587 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.84□□□□□ -1.8
BRCA2P51587 BMS1P22-201ENST00000414726 313 ntBASIC3.84□□□□□ -1.8
BRCA2P51587 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.84□□□□□ -1.8
BRCA2P51587 AL035458.1-201ENST00000433096 585 ntBASIC3.84□□□□□ -1.8
BRCA2P51587 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.84□□□□□ -1.8
BRCA2P51587 AC132942.1-201ENST00000486753 483 ntBASIC3.84□□□□□ -1.8
BRCA2P51587 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC3.84□□□□□ -1.8
BRCA2P51587 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC3.84□□□□□ -1.8
BRCA2P51587 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.84□□□□□ -1.8
BRCA2P51587 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC3.84□□□□□ -1.8
BRCA2P51587 A2MP1-204ENST00000566278 4130 ntBASIC3.84□□□□□ -1.8
BRCA2P51587 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
BRCA2P51587 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.84□□□□□ -1.8
BRCA2P51587 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
BRCA2P51587 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
BRCA2P51587 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.8
BRCA2P51587 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC3.84□□□□□ -1.8
BRCA2P51587 SAGE2P-201ENST00000420011 2126 ntBASIC3.84□□□□□ -1.8
BRCA2P51587 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
BRCA2P51587 AC058791.1-201ENST00000608412 3198 ntBASIC3.83□□□□□ -1.8
BRCA2P51587 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
BRCA2P51587 RNA5SP197-201ENST00000363357 119 ntBASIC3.83□□□□□ -1.8
BRCA2P51587 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC3.83□□□□□ -1.8
BRCA2P51587 AC011742.1-201ENST00000431448 434 ntBASIC3.83□□□□□ -1.8
BRCA2P51587 RPS29P26-201ENST00000477483 171 ntBASIC3.83□□□□□ -1.8
BRCA2P51587 AC100770.1-201ENST00000532310 322 ntBASIC3.83□□□□□ -1.8
BRCA2P51587 GTF3AP2-201ENST00000557014 266 ntBASIC3.83□□□□□ -1.8
BRCA2P51587 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.83□□□□□ -1.8
BRCA2P51587 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC3.83□□□□□ -1.8
BRCA2P51587 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
BRCA2P51587 HSPA8P19-201ENST00000505359 1517 ntBASIC3.83□□□□□ -1.8
BRCA2P51587 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
BRCA2P51587 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
BRCA2P51587 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.83□□□□□ -1.8
BRCA2P51587 RPL21P112-201ENST00000434403 463 ntBASIC3.83□□□□□ -1.8
BRCA2P51587 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.83□□□□□ -1.8
BRCA2P51587 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.83□□□□□ -1.8
BRCA2P51587 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.83□□□□□ -1.8
BRCA2P51587 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC3.83□□□□□ -1.8
BRCA2P51587 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.83□□□□□ -1.8
BRCA2P51587 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
BRCA2P51587 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
BRCA2P51587 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
BRCA2P51587 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
BRCA2P51587 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
BRCA2P51587 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
BRCA2P51587 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
BRCA2P51587 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
BRCA2P51587 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
BRCA2P51587 AL139132.1-201ENST00000431587 344 ntBASIC3.83□□□□□ -1.8
BRCA2P51587 SETP5-201ENST00000437270 562 ntBASIC3.83□□□□□ -1.8
BRCA2P51587 AL109933.2-201ENST00000452651 260 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms