Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.48□□□□□ -1.69
SOX2P48431 NF1P3-201ENST00000457709 450 ntBASIC4.48□□□□□ -1.69
SOX2P48431 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.48□□□□□ -1.69
SOX2P48431 UBA52P3-201ENST00000491303 382 ntBASIC4.48□□□□□ -1.69
SOX2P48431 AL024509.2-201ENST00000493462 493 ntBASIC4.48□□□□□ -1.69
SOX2P48431 RN7SL649P-201ENST00000496974 275 ntBASIC4.48□□□□□ -1.69
SOX2P48431 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.48□□□□□ -1.69
SOX2P48431 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.48□□□□□ -1.69
SOX2P48431 LTV1P1-201ENST00000510683 1237 ntBASIC4.48□□□□□ -1.69
SOX2P48431 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC4.48□□□□□ -1.69
SOX2P48431 RNU6-347P-201ENST00000516658 105 ntBASIC4.48□□□□□ -1.69
SOX2P48431 RNA5SP373-201ENST00000517271 95 ntBASIC4.48□□□□□ -1.69
SOX2P48431 AC012400.1-201ENST00000518452 381 ntBASIC4.48□□□□□ -1.69
SOX2P48431 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC4.48□□□□□ -1.69
SOX2P48431 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.48□□□□□ -1.69
SOX2P48431 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC4.48□□□□□ -1.69
SOX2P48431 MTCYBP20-201ENST00000524239 1129 ntBASIC4.48□□□□□ -1.69
SOX2P48431 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
SOX2P48431 AC024405.1-201ENST00000532521 1042 ntBASIC4.48□□□□□ -1.69
SOX2P48431 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC4.48□□□□□ -1.69
SOX2P48431 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.48□□□□□ -1.69
SOX2P48431 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
SOX2P48431 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.48□□□□□ -1.69
SOX2P48431 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.48□□□□□ -1.69
SOX2P48431 AL512347.1-201ENST00000566420 503 ntBASIC4.48□□□□□ -1.69
SOX2P48431 AC010547.6-201ENST00000571789 193 ntBASIC4.48□□□□□ -1.69
SOX2P48431 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.48□□□□□ -1.69
SOX2P48431 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC4.48□□□□□ -1.69
SOX2P48431 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC4.48□□□□□ -1.69
SOX2P48431 AC073544.2-201ENST00000601155 540 ntBASIC4.48□□□□□ -1.69
SOX2P48431 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC4.48□□□□□ -1.69
SOX2P48431 AL359715.5-201ENST00000623431 443 ntBASIC4.48□□□□□ -1.69
SOX2P48431 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.48□□□□□ -1.69
SOX2P48431 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC4.48□□□□□ -1.69
SOX2P48431 AC099063.3-201ENST00000642066 185 ntBASIC4.48□□□□□ -1.69
SOX2P48431 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SOX2P48431 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
SOX2P48431 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SOX2P48431 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
SOX2P48431 AL672167.1-205ENST00000641112 3080 ntBASIC4.48□□□□□ -1.69
SOX2P48431 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
SOX2P48431 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SOX2P48431 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SOX2P48431 AL731566.1-201ENST00000620490 1937 ntBASIC4.48□□□□□ -1.69
SOX2P48431 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
SOX2P48431 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.47□□□□□ -1.69
SOX2P48431 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
SOX2P48431 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SOX2P48431 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.47□□□□□ -1.69
SOX2P48431 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SOX2P48431 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
SOX2P48431 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.47□□□□□ -1.69
SOX2P48431 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
SOX2P48431 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SOX2P48431 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.47□□□□□ -1.69
SOX2P48431 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.47□□□□□ -1.69
SOX2P48431 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SOX2P48431 AC025125.1-201ENST00000624743 1922 ntBASIC4.47□□□□□ -1.69
SOX2P48431 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
SOX2P48431 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SOX2P48431 AL672167.1-206ENST00000356293 943 ntBASIC4.47□□□□□ -1.69
SOX2P48431 Y_RNA.25-201ENST00000362528 102 ntBASIC4.47□□□□□ -1.69
SOX2P48431 RNA5SP234-201ENST00000363916 119 ntBASIC4.47□□□□□ -1.69
SOX2P48431 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
SOX2P48431 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.47□□□□□ -1.69
SOX2P48431 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
SOX2P48431 RN7SKP273-201ENST00000411392 314 ntBASIC4.47□□□□□ -1.69
SOX2P48431 RPL7P8-201ENST00000411964 730 ntBASIC4.47□□□□□ -1.69
SOX2P48431 USP9YP33-201ENST00000412220 421 ntBASIC4.47□□□□□ -1.69
SOX2P48431 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC4.47□□□□□ -1.69
SOX2P48431 AC092634.6-201ENST00000418558 192 ntBASIC4.47□□□□□ -1.69
SOX2P48431 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SOX2P48431 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.47□□□□□ -1.69
SOX2P48431 AC062016.2-201ENST00000420950 676 ntBASIC4.47□□□□□ -1.69
SOX2P48431 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC4.47□□□□□ -1.69
SOX2P48431 AC233981.1-201ENST00000423224 461 ntBASIC4.47□□□□□ -1.69
SOX2P48431 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.47□□□□□ -1.69
SOX2P48431 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC4.47□□□□□ -1.69
SOX2P48431 COX6CP13-201ENST00000428703 226 ntBASIC4.47□□□□□ -1.69
SOX2P48431 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC4.47□□□□□ -1.69
SOX2P48431 USP9YP35-201ENST00000435696 412 ntBASIC4.47□□□□□ -1.69
SOX2P48431 AL353706.1-201ENST00000436728 494 ntBASIC4.47□□□□□ -1.69
SOX2P48431 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.47□□□□□ -1.69
SOX2P48431 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.47□□□□□ -1.69
SOX2P48431 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC4.47□□□□□ -1.69
SOX2P48431 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SOX2P48431 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.47□□□□□ -1.69
SOX2P48431 RNA5SP103-201ENST00000459503 118 ntBASIC4.47□□□□□ -1.69
SOX2P48431 AC104689.1-201ENST00000473356 768 ntBASIC4.47□□□□□ -1.69
SOX2P48431 RN7SL741P-201ENST00000482473 289 ntBASIC4.47□□□□□ -1.69
SOX2P48431 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.47□□□□□ -1.69
SOX2P48431 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC4.47□□□□□ -1.69
SOX2P48431 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC4.47□□□□□ -1.69
SOX2P48431 AC025674.1-201ENST00000507074 324 ntBASIC4.47□□□□□ -1.69
SOX2P48431 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.47□□□□□ -1.69
SOX2P48431 RPL7L1P13-201ENST00000511702 739 ntBASIC4.47□□□□□ -1.69
SOX2P48431 AC091965.2-201ENST00000512324 613 ntBASIC4.47□□□□□ -1.69
SOX2P48431 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.47□□□□□ -1.69
SOX2P48431 SNORA48.10-201ENST00000516965 160 ntBASIC4.47□□□□□ -1.69
SOX2P48431 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms