Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 AC073648.4-201ENST00000442655 781 ntBASIC3.96□□□□□ -1.78
CDX1P47902 RPS26P56-201ENST00000444468 240 ntBASIC3.96□□□□□ -1.78
CDX1P47902 AL354714.3-201ENST00000447284 493 ntBASIC3.96□□□□□ -1.78
CDX1P47902 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC3.96□□□□□ -1.78
CDX1P47902 SBDSP1-204ENST00000453858 737 ntBASIC3.96□□□□□ -1.78
CDX1P47902 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CDX1P47902 RPL21P71-201ENST00000465598 459 ntBASIC3.96□□□□□ -1.78
CDX1P47902 AC087879.1-201ENST00000474343 374 ntBASIC3.96□□□□□ -1.78
CDX1P47902 AC069528.1-202ENST00000482888 637 ntBASIC3.96□□□□□ -1.78
CDX1P47902 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.96□□□□□ -1.78
CDX1P47902 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
CDX1P47902 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC3.96□□□□□ -1.78
CDX1P47902 RN7SKP277-201ENST00000516895 283 ntBASIC3.96□□□□□ -1.78
CDX1P47902 RN7SKP234-201ENST00000517173 224 ntBASIC3.96□□□□□ -1.78
CDX1P47902 AP001922.4-201ENST00000526967 290 ntBASIC3.96□□□□□ -1.78
CDX1P47902 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC3.96□□□□□ -1.78
CDX1P47902 AC069240.1-201ENST00000548774 375 ntBASIC3.96□□□□□ -1.78
CDX1P47902 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.96□□□□□ -1.78
CDX1P47902 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CDX1P47902 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.96□□□□□ -1.78
CDX1P47902 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC3.96□□□□□ -1.78
CDX1P47902 MTCYBP23-201ENST00000558717 1102 ntBASIC3.96□□□□□ -1.78
CDX1P47902 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC3.96□□□□□ -1.78
CDX1P47902 MTCYBP28-201ENST00000566728 1132 ntBASIC3.96□□□□□ -1.78
CDX1P47902 AGGF1P6-201ENST00000569213 976 ntBASIC3.96□□□□□ -1.78
CDX1P47902 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC3.96□□□□□ -1.78
CDX1P47902 MIR5708-201ENST00000579723 85 ntBASIC3.96□□□□□ -1.78
CDX1P47902 MIR4666A-201ENST00000580160 79 ntBASIC3.96□□□□□ -1.78
CDX1P47902 AC008638.3-201ENST00000603341 463 ntBASIC3.96□□□□□ -1.78
CDX1P47902 AL139395.1-201ENST00000603662 160 ntBASIC3.96□□□□□ -1.78
CDX1P47902 AC010680.4-201ENST00000605334 543 ntBASIC3.96□□□□□ -1.78
CDX1P47902 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC3.96□□□□□ -1.78
CDX1P47902 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC3.96□□□□□ -1.78
CDX1P47902 AL592148.2-201ENST00000612210 372 ntBASIC3.96□□□□□ -1.78
CDX1P47902 PART1_2.1-201ENST00000612397 250 ntBASIC3.96□□□□□ -1.78
CDX1P47902 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC3.96□□□□□ -1.78
CDX1P47902 MIR7154-201ENST00000620673 73 ntBASIC3.96□□□□□ -1.78
CDX1P47902 AC009452.1-201ENST00000640823 606 ntBASIC3.96□□□□□ -1.78
CDX1P47902 AL672167.1-203ENST00000641299 2975 ntBASIC3.96□□□□□ -1.78
CDX1P47902 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CDX1P47902 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CDX1P47902 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CDX1P47902 AC000367.1-201ENST00000452711 1766 ntBASIC3.96□□□□□ -1.78
CDX1P47902 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC3.96□□□□□ -1.78
CDX1P47902 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.96□□□□□ -1.78
CDX1P47902 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
CDX1P47902 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CDX1P47902 DCAF13P3-201ENST00000561147 1334 ntBASIC3.95□□□□□ -1.78
CDX1P47902 ZNF33CP-201ENST00000432492 2030 ntBASIC3.95□□□□□ -1.78
CDX1P47902 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
CDX1P47902 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CDX1P47902 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.95□□□□□ -1.78
CDX1P47902 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CDX1P47902 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CDX1P47902 HMGB1P5-201ENST00000255320 642 ntBASIC3.95□□□□□ -1.78
CDX1P47902 RNA5SP455-201ENST00000365190 119 ntBASIC3.95□□□□□ -1.78
CDX1P47902 SNORA66-201ENST00000384792 133 ntBASIC3.95□□□□□ -1.78
CDX1P47902 AL109941.1-201ENST00000401925 229 ntBASIC3.95□□□□□ -1.78
CDX1P47902 ZNF602P-201ENST00000405929 924 ntBASIC3.95□□□□□ -1.78
CDX1P47902 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CDX1P47902 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.95□□□□□ -1.78
CDX1P47902 RPS12P23-201ENST00000419579 400 ntBASIC3.95□□□□□ -1.78
CDX1P47902 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.95□□□□□ -1.78
CDX1P47902 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.95□□□□□ -1.78
CDX1P47902 COX6CP13-201ENST00000428703 226 ntBASIC3.95□□□□□ -1.78
CDX1P47902 SKP1P3-201ENST00000429280 487 ntBASIC3.95□□□□□ -1.78
CDX1P47902 AC093414.1-201ENST00000434712 514 ntBASIC3.95□□□□□ -1.78
CDX1P47902 PSMD10P3-201ENST00000437000 448 ntBASIC3.95□□□□□ -1.78
CDX1P47902 AL772161.1-201ENST00000439130 476 ntBASIC3.95□□□□□ -1.78
CDX1P47902 AC011753.3-201ENST00000443436 406 ntBASIC3.95□□□□□ -1.78
CDX1P47902 OR7E125P-201ENST00000443450 846 ntBASIC3.95□□□□□ -1.78
CDX1P47902 AL358794.1-201ENST00000445689 381 ntBASIC3.95□□□□□ -1.78
CDX1P47902 AC004980.3-201ENST00000447046 365 ntBASIC3.95□□□□□ -1.78
CDX1P47902 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC3.95□□□□□ -1.78
CDX1P47902 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.95□□□□□ -1.78
CDX1P47902 NF1P3-201ENST00000457709 450 ntBASIC3.95□□□□□ -1.78
CDX1P47902 AP000893.1-201ENST00000474462 794 ntBASIC3.95□□□□□ -1.78
CDX1P47902 AC087385.1-201ENST00000475062 312 ntBASIC3.95□□□□□ -1.78
CDX1P47902 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.95□□□□□ -1.78
CDX1P47902 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CDX1P47902 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.95□□□□□ -1.78
CDX1P47902 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC3.95□□□□□ -1.78
CDX1P47902 UBE2Q2P10-201ENST00000514854 900 ntBASIC3.95□□□□□ -1.78
CDX1P47902 RNA5SP135-201ENST00000517019 125 ntBASIC3.95□□□□□ -1.78
CDX1P47902 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC3.95□□□□□ -1.78
CDX1P47902 AC092747.2-201ENST00000545069 983 ntBASIC3.95□□□□□ -1.78
CDX1P47902 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC3.95□□□□□ -1.78
CDX1P47902 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.95□□□□□ -1.78
CDX1P47902 AGGF1P8-201ENST00000562979 1000 ntBASIC3.95□□□□□ -1.78
CDX1P47902 AC074051.3-201ENST00000570238 358 ntBASIC3.95□□□□□ -1.78
CDX1P47902 AC068790.5-201ENST00000602741 355 ntBASIC3.95□□□□□ -1.78
CDX1P47902 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.95□□□□□ -1.78
CDX1P47902 AC010680.3-201ENST00000604215 520 ntBASIC3.95□□□□□ -1.78
CDX1P47902 AC024060.1-201ENST00000607052 494 ntBASIC3.95□□□□□ -1.78
CDX1P47902 AL354760.1-201ENST00000608357 643 ntBASIC3.95□□□□□ -1.78
CDX1P47902 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
CDX1P47902 AC112694.2-201ENST00000623697 768 ntBASIC3.95□□□□□ -1.78
CDX1P47902 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
CDX1P47902 MIR4496-201ENST00000635896 61 ntBASIC3.95□□□□□ -1.78
CDX1P47902 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms