Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
APOBEC1P41238 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.27□□□□□ -1.73
APOBEC1P41238 AC005332.5-201ENST00000591222 2919 ntBASIC4.27□□□□□ -1.73
APOBEC1P41238 MAPK10-349ENST00000641767 3661 ntBASIC4.27□□□□□ -1.73
APOBEC1P41238 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
APOBEC1P41238 RNA5SP191-201ENST00000362585 102 ntBASIC4.27□□□□□ -1.73
APOBEC1P41238 SNORD116.1-201ENST00000365628 92 ntBASIC4.27□□□□□ -1.73
APOBEC1P41238 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
APOBEC1P41238 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
APOBEC1P41238 MIR550A3-201ENST00000390735 95 ntBASIC4.27□□□□□ -1.73
APOBEC1P41238 Z98745.1-201ENST00000402553 494 ntBASIC4.27□□□□□ -1.73
APOBEC1P41238 AL080315.1-201ENST00000406055 466 ntBASIC4.27□□□□□ -1.73
APOBEC1P41238 RN7SKP199-201ENST00000410325 305 ntBASIC4.27□□□□□ -1.73
APOBEC1P41238 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.27□□□□□ -1.73
APOBEC1P41238 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.27□□□□□ -1.73
APOBEC1P41238 AC007435.1-201ENST00000421086 415 ntBASIC4.27□□□□□ -1.73
APOBEC1P41238 RPL7P57-201ENST00000423238 740 ntBASIC4.27□□□□□ -1.73
APOBEC1P41238 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC4.27□□□□□ -1.73
APOBEC1P41238 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.27□□□□□ -1.73
APOBEC1P41238 RPS26P47-201ENST00000427219 348 ntBASIC4.27□□□□□ -1.73
APOBEC1P41238 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.27□□□□□ -1.73
APOBEC1P41238 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC4.27□□□□□ -1.73
APOBEC1P41238 AC016831.4-201ENST00000438302 307 ntBASIC4.27□□□□□ -1.73
APOBEC1P41238 USP9YP22-201ENST00000438971 294 ntBASIC4.27□□□□□ -1.73
APOBEC1P41238 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.27□□□□□ -1.73
APOBEC1P41238 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.27□□□□□ -1.73
APOBEC1P41238 HMGB1P48-201ENST00000446155 598 ntBASIC4.27□□□□□ -1.73
APOBEC1P41238 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.27□□□□□ -1.73
APOBEC1P41238 AC079168.2-201ENST00000453977 416 ntBASIC4.27□□□□□ -1.73
APOBEC1P41238 PPIAP21-201ENST00000464473 501 ntBASIC4.27□□□□□ -1.73
APOBEC1P41238 AC011979.1-201ENST00000472300 483 ntBASIC4.27□□□□□ -1.73
APOBEC1P41238 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.27□□□□□ -1.73
APOBEC1P41238 AC093270.2-201ENST00000486157 792 ntBASIC4.27□□□□□ -1.73
APOBEC1P41238 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC4.27□□□□□ -1.73
APOBEC1P41238 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.27□□□□□ -1.73
APOBEC1P41238 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
APOBEC1P41238 MRPS36P3-201ENST00000519284 130 ntBASIC4.27□□□□□ -1.73
APOBEC1P41238 IGKV1-32-201ENST00000519290 311 ntBASIC4.27□□□□□ -1.73
APOBEC1P41238 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
APOBEC1P41238 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.27□□□□□ -1.73
APOBEC1P41238 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.27□□□□□ -1.73
APOBEC1P41238 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC4.27□□□□□ -1.73
APOBEC1P41238 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.27□□□□□ -1.73
APOBEC1P41238 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.27□□□□□ -1.73
APOBEC1P41238 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.27□□□□□ -1.73
APOBEC1P41238 SETP1-201ENST00000556014 845 ntBASIC4.27□□□□□ -1.73
APOBEC1P41238 UBE2FP2-201ENST00000566646 462 ntBASIC4.27□□□□□ -1.73
APOBEC1P41238 AC091042.1-201ENST00000579213 173 ntBASIC4.27□□□□□ -1.73
APOBEC1P41238 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC4.27□□□□□ -1.73
APOBEC1P41238 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC4.27□□□□□ -1.73
APOBEC1P41238 AL390816.3-201ENST00000604527 1066 ntBASIC4.27□□□□□ -1.73
APOBEC1P41238 AC069545.1-201ENST00000605671 358 ntBASIC4.27□□□□□ -1.73
APOBEC1P41238 AC092106.3-201ENST00000611308 722 ntBASIC4.27□□□□□ -1.73
APOBEC1P41238 AC231759.1-201ENST00000616455 597 ntBASIC4.27□□□□□ -1.73
APOBEC1P41238 AC022509.4-201ENST00000621404 572 ntBASIC4.27□□□□□ -1.73
APOBEC1P41238 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.27□□□□□ -1.73
APOBEC1P41238 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.27□□□□□ -1.73
APOBEC1P41238 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
APOBEC1P41238 A2MP1-204ENST00000566278 4130 ntBASIC4.27□□□□□ -1.73
APOBEC1P41238 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
APOBEC1P41238 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
APOBEC1P41238 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.27□□□□□ -1.73
APOBEC1P41238 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
APOBEC1P41238 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.26□□□□□ -1.73
APOBEC1P41238 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.26□□□□□ -1.73
APOBEC1P41238 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.26□□□□□ -1.73
APOBEC1P41238 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.26□□□□□ -1.73
APOBEC1P41238 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.26□□□□□ -1.73
APOBEC1P41238 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.26□□□□□ -1.73
APOBEC1P41238 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.26□□□□□ -1.73
APOBEC1P41238 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.26□□□□□ -1.73
APOBEC1P41238 RNU6-1151P-201ENST00000384684 107 ntBASIC4.26□□□□□ -1.73
APOBEC1P41238 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.26□□□□□ -1.73
APOBEC1P41238 AL133270.1-201ENST00000402635 279 ntBASIC4.26□□□□□ -1.73
APOBEC1P41238 METTL5-204ENST00000409340 472 ntTSL 5 BASIC4.26□□□□□ -1.73
APOBEC1P41238 RSU1P3-201ENST00000412878 835 ntBASIC4.26□□□□□ -1.73
APOBEC1P41238 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
APOBEC1P41238 VPS26BP1-201ENST00000417155 755 ntBASIC4.26□□□□□ -1.73
APOBEC1P41238 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
APOBEC1P41238 GTF2IP23-201ENST00000423746 351 ntBASIC4.26□□□□□ -1.73
APOBEC1P41238 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.26□□□□□ -1.73
APOBEC1P41238 BLOC1S2P1-201ENST00000428431 301 ntBASIC4.26□□□□□ -1.73
APOBEC1P41238 AC008072.1-201ENST00000434254 824 ntBASIC4.26□□□□□ -1.73
APOBEC1P41238 AC005154.2-201ENST00000438110 379 ntBASIC4.26□□□□□ -1.73
APOBEC1P41238 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.26□□□□□ -1.73
APOBEC1P41238 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
APOBEC1P41238 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
APOBEC1P41238 AC112206.1-201ENST00000468416 477 ntBASIC4.26□□□□□ -1.73
APOBEC1P41238 RN7SL826P-201ENST00000479724 288 ntBASIC4.26□□□□□ -1.73
APOBEC1P41238 AC091951.3-201ENST00000504093 246 ntBASIC4.26□□□□□ -1.73
APOBEC1P41238 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC4.26□□□□□ -1.73
APOBEC1P41238 AC048346.1-201ENST00000510247 144 ntBASIC4.26□□□□□ -1.73
APOBEC1P41238 AC093755.1-201ENST00000512950 1023 ntBASIC4.26□□□□□ -1.73
APOBEC1P41238 RNA5SP228-201ENST00000516232 133 ntBASIC4.26□□□□□ -1.73
APOBEC1P41238 RNA5SP135-201ENST00000517019 125 ntBASIC4.26□□□□□ -1.73
APOBEC1P41238 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.26□□□□□ -1.73
APOBEC1P41238 AF279873.1-201ENST00000523393 313 ntBASIC4.26□□□□□ -1.73
APOBEC1P41238 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.26□□□□□ -1.73
APOBEC1P41238 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.26□□□□□ -1.73
APOBEC1P41238 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms