Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AC105074.1-201ENST00000623380 3095 ntBASIC3.82□□□□□ -1.8
RFC3P40938 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.82□□□□□ -1.8
RFC3P40938 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.82□□□□□ -1.8
RFC3P40938 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
RFC3P40938 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.82□□□□□ -1.8
RFC3P40938 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
RFC3P40938 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RFC3P40938 RNU1-64P-201ENST00000365443 163 ntBASIC3.82□□□□□ -1.8
RFC3P40938 MIR134-201ENST00000385258 73 ntBASIC3.82□□□□□ -1.8
RFC3P40938 AL138878.1-201ENST00000405131 347 ntBASIC3.82□□□□□ -1.8
RFC3P40938 MIR1183-201ENST00000408856 89 ntBASIC3.82□□□□□ -1.8
RFC3P40938 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.82□□□□□ -1.8
RFC3P40938 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC3.82□□□□□ -1.8
RFC3P40938 JKAMPP1-201ENST00000413804 919 ntBASIC3.82□□□□□ -1.8
RFC3P40938 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.82□□□□□ -1.8
RFC3P40938 AC108032.1-201ENST00000416706 207 ntBASIC3.82□□□□□ -1.8
RFC3P40938 AL356806.1-201ENST00000422524 916 ntBASIC3.82□□□□□ -1.8
RFC3P40938 NDUFA5P10-201ENST00000432147 357 ntBASIC3.82□□□□□ -1.8
RFC3P40938 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.82□□□□□ -1.8
RFC3P40938 RPL23AP46-201ENST00000438548 490 ntBASIC3.82□□□□□ -1.8
RFC3P40938 ELOCP8-201ENST00000439309 332 ntBASIC3.82□□□□□ -1.8
RFC3P40938 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.82□□□□□ -1.8
RFC3P40938 ELOCP15-201ENST00000442090 332 ntBASIC3.82□□□□□ -1.8
RFC3P40938 AC239367.2-201ENST00000447309 705 ntBASIC3.82□□□□□ -1.8
RFC3P40938 HMGB3P21-201ENST00000452483 547 ntBASIC3.82□□□□□ -1.8
RFC3P40938 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.82□□□□□ -1.8
RFC3P40938 HPRT1P2-201ENST00000505250 544 ntBASIC3.82□□□□□ -1.8
RFC3P40938 PCNAP1-201ENST00000505363 709 ntBASIC3.82□□□□□ -1.8
RFC3P40938 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC3.82□□□□□ -1.8
RFC3P40938 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.82□□□□□ -1.8
RFC3P40938 AC108120.2-201ENST00000512973 294 ntBASIC3.82□□□□□ -1.8
RFC3P40938 RNA5SP73-201ENST00000516744 108 ntBASIC3.82□□□□□ -1.8
RFC3P40938 RNU6-1308P-201ENST00000516817 103 ntBASIC3.82□□□□□ -1.8
RFC3P40938 HIGD1AP18-201ENST00000520730 278 ntBASIC3.82□□□□□ -1.8
RFC3P40938 AC090151.1-201ENST00000520784 730 ntBASIC3.82□□□□□ -1.8
RFC3P40938 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.82□□□□□ -1.8
RFC3P40938 OR5M7P-201ENST00000526140 972 ntBASIC3.82□□□□□ -1.8
RFC3P40938 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
RFC3P40938 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
RFC3P40938 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.82□□□□□ -1.8
RFC3P40938 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.82□□□□□ -1.8
RFC3P40938 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.82□□□□□ -1.8
RFC3P40938 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.82□□□□□ -1.8
RFC3P40938 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.82□□□□□ -1.8
RFC3P40938 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC3.82□□□□□ -1.8
RFC3P40938 RNU4-89P-201ENST00000607443 133 ntBASIC3.82□□□□□ -1.8
RFC3P40938 AC135803.1-201ENST00000608748 565 ntBASIC3.82□□□□□ -1.8
RFC3P40938 AC123768.4-201ENST00000616244 701 ntBASIC3.82□□□□□ -1.8
RFC3P40938 MIR6875-201ENST00000617506 72 ntBASIC3.82□□□□□ -1.8
RFC3P40938 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.82□□□□□ -1.8
RFC3P40938 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
RFC3P40938 Z73965.1-201ENST00000623412 2297 ntBASIC3.82□□□□□ -1.8
RFC3P40938 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
RFC3P40938 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RFC3P40938 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.81□□□□□ -1.8
RFC3P40938 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
RFC3P40938 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RFC3P40938 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.81□□□□□ -1.8
RFC3P40938 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RFC3P40938 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RFC3P40938 AL359715.4-201ENST00000606629 1436 ntBASIC3.81□□□□□ -1.8
RFC3P40938 AC096656.1-201ENST00000623826 1364 ntBASIC3.81□□□□□ -1.8
RFC3P40938 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.81□□□□□ -1.8
RFC3P40938 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RFC3P40938 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RFC3P40938 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
RFC3P40938 RNA5SP388-201ENST00000362584 119 ntBASIC3.81□□□□□ -1.8
RFC3P40938 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
RFC3P40938 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.81□□□□□ -1.8
RFC3P40938 AL450992.3-201ENST00000413192 568 ntBASIC3.81□□□□□ -1.8
RFC3P40938 AC009965.2-201ENST00000425328 970 ntBASIC3.81□□□□□ -1.8
RFC3P40938 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC3.81□□□□□ -1.8
RFC3P40938 RPL7P2-201ENST00000427639 268 ntBASIC3.81□□□□□ -1.8
RFC3P40938 AL606490.7-201ENST00000433136 191 ntBASIC3.81□□□□□ -1.8
RFC3P40938 AL356276.2-201ENST00000435919 558 ntBASIC3.81□□□□□ -1.8
RFC3P40938 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.81□□□□□ -1.8
RFC3P40938 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.81□□□□□ -1.8
RFC3P40938 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC3.81□□□□□ -1.8
RFC3P40938 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC3.81□□□□□ -1.8
RFC3P40938 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.81□□□□□ -1.8
RFC3P40938 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RFC3P40938 AC021087.2-201ENST00000504656 1203 ntBASIC3.81□□□□□ -1.8
RFC3P40938 MTND4LP31-201ENST00000514859 294 ntBASIC3.81□□□□□ -1.8
RFC3P40938 AC104997.1-201ENST00000519761 717 ntBASIC3.81□□□□□ -1.8
RFC3P40938 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC3.81□□□□□ -1.8
RFC3P40938 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.81□□□□□ -1.8
RFC3P40938 AC027176.2-201ENST00000559166 746 ntBASIC3.81□□□□□ -1.8
RFC3P40938 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.81□□□□□ -1.8
RFC3P40938 BNIP3P7-201ENST00000605641 516 ntBASIC3.81□□□□□ -1.8
RFC3P40938 AC099676.1-201ENST00000608886 657 ntBASIC3.81□□□□□ -1.8
RFC3P40938 AL138721.1-201ENST00000616756 179 ntBASIC3.81□□□□□ -1.8
RFC3P40938 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
RFC3P40938 AC010608.2-201ENST00000624830 470 ntBASIC3.81□□□□□ -1.8
RFC3P40938 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC3.81□□□□□ -1.8
RFC3P40938 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.81□□□□□ -1.8
RFC3P40938 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.81□□□□□ -1.8
RFC3P40938 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RFC3P40938 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.81□□□□□ -1.8
RFC3P40938 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RFC3P40938 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms