Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.31□□□□□ -1.72
CASQ1P31415 AC110792.2-201ENST00000510278 224 ntBASIC4.31□□□□□ -1.72
CASQ1P31415 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC4.31□□□□□ -1.72
CASQ1P31415 IGKV2D-10-201ENST00000520194 281 ntBASIC4.31□□□□□ -1.72
CASQ1P31415 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.31□□□□□ -1.72
CASQ1P31415 EIF4EP5-201ENST00000528228 640 ntBASIC4.31□□□□□ -1.72
CASQ1P31415 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.31□□□□□ -1.72
CASQ1P31415 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.31□□□□□ -1.72
CASQ1P31415 AL133457.1-201ENST00000564251 987 ntBASIC4.31□□□□□ -1.72
CASQ1P31415 AC084783.1-201ENST00000565846 910 ntBASIC4.31□□□□□ -1.72
CASQ1P31415 AC008782.1-201ENST00000603386 430 ntBASIC4.31□□□□□ -1.72
CASQ1P31415 AC115286.1-201ENST00000604298 434 ntBASIC4.31□□□□□ -1.72
CASQ1P31415 AC114878.2-201ENST00000604863 1251 ntBASIC4.31□□□□□ -1.72
CASQ1P31415 AL592436.1-201ENST00000605135 558 ntBASIC4.31□□□□□ -1.72
CASQ1P31415 BRDTP1-201ENST00000605735 677 ntBASIC4.31□□□□□ -1.72
CASQ1P31415 MIR7973-1-201ENST00000614683 76 ntBASIC4.31□□□□□ -1.72
CASQ1P31415 AC022467.1-201ENST00000614738 749 ntBASIC4.31□□□□□ -1.72
CASQ1P31415 MIR8058-201ENST00000615737 89 ntBASIC4.31□□□□□ -1.72
CASQ1P31415 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC4.31□□□□□ -1.72
CASQ1P31415 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.31□□□□□ -1.72
CASQ1P31415 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CASQ1P31415 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CASQ1P31415 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.3□□□□□ -1.72
CASQ1P31415 AC138915.3-201ENST00000562908 1389 ntBASIC4.3□□□□□ -1.72
CASQ1P31415 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CASQ1P31415 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.3□□□□□ -1.72
CASQ1P31415 CR381670.1-201ENST00000624291 1693 ntBASIC4.3□□□□□ -1.72
CASQ1P31415 RN7SKP15-201ENST00000364742 309 ntBASIC4.3□□□□□ -1.72
CASQ1P31415 SNORA70F-201ENST00000384142 135 ntBASIC4.3□□□□□ -1.72
CASQ1P31415 SNORA70E-201ENST00000384492 135 ntBASIC4.3□□□□□ -1.72
CASQ1P31415 HSPE1P8-201ENST00000406997 288 ntBASIC4.3□□□□□ -1.72
CASQ1P31415 RPL37P18-201ENST00000411602 243 ntBASIC4.3□□□□□ -1.72
CASQ1P31415 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.3□□□□□ -1.72
CASQ1P31415 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.3□□□□□ -1.72
CASQ1P31415 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.3□□□□□ -1.72
CASQ1P31415 AL358472.1-201ENST00000431295 329 ntBASIC4.3□□□□□ -1.72
CASQ1P31415 AC008072.1-201ENST00000434254 824 ntBASIC4.3□□□□□ -1.72
CASQ1P31415 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.3□□□□□ -1.72
CASQ1P31415 AC006011.1-201ENST00000442758 349 ntBASIC4.3□□□□□ -1.72
CASQ1P31415 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.3□□□□□ -1.72
CASQ1P31415 AC004801.2-202ENST00000463559 283 ntBASIC4.3□□□□□ -1.72
CASQ1P31415 RPL37P6-202ENST00000464216 403 ntBASIC4.3□□□□□ -1.72
CASQ1P31415 RPL23AP14-201ENST00000468281 468 ntBASIC4.3□□□□□ -1.72
CASQ1P31415 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.3□□□□□ -1.72
CASQ1P31415 RPL7P24-201ENST00000493052 752 ntBASIC4.3□□□□□ -1.72
CASQ1P31415 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.3□□□□□ -1.72
CASQ1P31415 AC010285.3-201ENST00000511668 676 ntBASIC4.3□□□□□ -1.72
CASQ1P31415 AC034244.2-201ENST00000514668 858 ntBASIC4.3□□□□□ -1.72
CASQ1P31415 RNA5SP519-201ENST00000516480 119 ntBASIC4.3□□□□□ -1.72
CASQ1P31415 HIGD1AP18-201ENST00000520730 278 ntBASIC4.3□□□□□ -1.72
CASQ1P31415 IGKV3D-34-201ENST00000522638 302 ntBASIC4.3□□□□□ -1.72
CASQ1P31415 OR7E10P-201ENST00000526420 991 ntBASIC4.3□□□□□ -1.72
CASQ1P31415 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.3□□□□□ -1.72
CASQ1P31415 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.3□□□□□ -1.72
CASQ1P31415 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.3□□□□□ -1.72
CASQ1P31415 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.3□□□□□ -1.72
CASQ1P31415 AC022655.2-201ENST00000577280 318 ntBASIC4.3□□□□□ -1.72
CASQ1P31415 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.3□□□□□ -1.72
CASQ1P31415 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.3□□□□□ -1.72
CASQ1P31415 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.3□□□□□ -1.72
CASQ1P31415 AC115085.1-201ENST00000588924 229 ntBASIC4.3□□□□□ -1.72
CASQ1P31415 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.3□□□□□ -1.72
CASQ1P31415 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CASQ1P31415 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CASQ1P31415 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CASQ1P31415 AC011472.4-201ENST00000615848 491 ntBASIC4.3□□□□□ -1.72
CASQ1P31415 AL590410.1-201ENST00000617925 333 ntBASIC4.3□□□□□ -1.72
CASQ1P31415 AC022079.2-201ENST00000619739 566 ntBASIC4.3□□□□□ -1.72
CASQ1P31415 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CASQ1P31415 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
CASQ1P31415 AC091152.2-201ENST00000591628 2569 ntBASIC4.3□□□□□ -1.72
CASQ1P31415 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
CASQ1P31415 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
CASQ1P31415 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.29□□□□□ -1.72
CASQ1P31415 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CASQ1P31415 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CASQ1P31415 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
CASQ1P31415 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.29□□□□□ -1.72
CASQ1P31415 NRBF2P2-201ENST00000413087 861 ntBASIC4.29□□□□□ -1.72
CASQ1P31415 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CASQ1P31415 AL392003.1-201ENST00000434394 243 ntBASIC4.29□□□□□ -1.72
CASQ1P31415 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.29□□□□□ -1.72
CASQ1P31415 MTCYBP12-201ENST00000440559 1134 ntBASIC4.29□□□□□ -1.72
CASQ1P31415 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.29□□□□□ -1.72
CASQ1P31415 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.29□□□□□ -1.72
CASQ1P31415 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC4.29□□□□□ -1.72
CASQ1P31415 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CASQ1P31415 AC239367.2-201ENST00000447309 705 ntBASIC4.29□□□□□ -1.72
CASQ1P31415 AC144530.1-201ENST00000452862 555 ntBASIC4.29□□□□□ -1.72
CASQ1P31415 AC146507.1-201ENST00000468335 354 ntBASIC4.29□□□□□ -1.72
CASQ1P31415 AC004815.1-201ENST00000484185 331 ntBASIC4.29□□□□□ -1.72
CASQ1P31415 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.29□□□□□ -1.72
CASQ1P31415 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CASQ1P31415 AC106872.4-201ENST00000510050 523 ntBASIC4.29□□□□□ -1.72
CASQ1P31415 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.29□□□□□ -1.72
CASQ1P31415 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.29□□□□□ -1.72
CASQ1P31415 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.29□□□□□ -1.72
CASQ1P31415 RBM7-208ENST00000545678 867 ntTSL 3 BASIC4.29□□□□□ -1.72
CASQ1P31415 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.29□□□□□ -1.72
CASQ1P31415 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms