Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 ZNF259P1-202ENST00000572422 4912 ntBASIC8.81□□□□□ -1
HOXD11P31277 ZNF343-201ENST00000278772 3632 ntAPPRIS P3 TSL 2 BASIC8.81□□□□□ -1
HOXD11P31277 TRIM49D1-201ENST00000420869 1651 ntAPPRIS P2 TSL 5 BASIC8.81□□□□□ -1
HOXD11P31277 TRIM49D2-202ENST00000623787 1651 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
HOXD11P31277 NMT1-201ENST00000258960 4879 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
HOXD11P31277 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC8.8□□□□□ -1
HOXD11P31277 KIF13A-203ENST00000378814 6924 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
HOXD11P31277 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
HOXD11P31277 RBBP6-201ENST00000319715 6229 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
HOXD11P31277 MOCOS-201ENST00000261326 6160 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
HOXD11P31277 AC068700.1-201ENST00000565862 3754 ntBASIC8.8□□□□□ -1
HOXD11P31277 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC8.8□□□□□ -1
HOXD11P31277 GTF2IRD2P1-201ENST00000449689 2749 ntBASIC8.8□□□□□ -1
HOXD11P31277 MYOM2-212ENST00000523438 3328 ntTSL 2 BASIC8.8□□□□□ -1
HOXD11P31277 MICAL2-202ENST00000342902 3711 ntAPPRIS ALT2 TSL 2 BASIC8.8□□□□□ -1
HOXD11P31277 RECQL5-203ENST00000420326 3710 ntTSL 1 (best) BASIC8.8□□□□□ -1
HOXD11P31277 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
HOXD11P31277 GNG8-201ENST00000300873 216 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
HOXD11P31277 RNU6-324P-201ENST00000363957 106 ntBASIC8.8□□□□□ -1
HOXD11P31277 FHL1-203ENST00000370676 833 ntTSL 5 BASIC8.8□□□□□ -1
HOXD11P31277 MIR138-2-201ENST00000384916 84 ntBASIC8.8□□□□□ -1
HOXD11P31277 MIR526A2-201ENST00000390198 65 ntBASIC8.8□□□□□ -1
HOXD11P31277 RN7SKP136-201ENST00000410927 300 ntBASIC8.8□□□□□ -1
HOXD11P31277 RPL31P2-201ENST00000413849 377 ntBASIC8.8□□□□□ -1
HOXD11P31277 AC009963.1-201ENST00000417265 157 ntBASIC8.8□□□□□ -1
HOXD11P31277 AC234781.4-201ENST00000419384 244 ntBASIC8.8□□□□□ -1
HOXD11P31277 ZEB2-AS1-201ENST00000421083 453 ntTSL 2 BASIC8.8□□□□□ -1
HOXD11P31277 AL391219.1-201ENST00000422570 483 ntBASIC8.8□□□□□ -1
HOXD11P31277 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC8.8□□□□□ -1
HOXD11P31277 LINC00460-201ENST00000435024 631 ntTSL 1 (best) BASIC8.8□□□□□ -1
HOXD11P31277 RPL36AP39-201ENST00000445859 318 ntBASIC8.8□□□□□ -1
HOXD11P31277 AC010265.1-201ENST00000513509 211 ntBASIC8.8□□□□□ -1
HOXD11P31277 OR5M6P-201ENST00000530227 937 ntBASIC8.8□□□□□ -1
HOXD11P31277 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC8.8□□□□□ -1
HOXD11P31277 AC018630.3-201ENST00000542637 96 ntBASIC8.8□□□□□ -1
HOXD11P31277 PRELID2P1-201ENST00000552837 301 ntBASIC8.8□□□□□ -1
HOXD11P31277 AC091178.2-201ENST00000584401 117 ntBASIC8.8□□□□□ -1
HOXD11P31277 AC006380.1-201ENST00000603598 186 ntBASIC8.8□□□□□ -1
HOXD11P31277 AL121928.1-201ENST00000608017 521 ntBASIC8.8□□□□□ -1
HOXD11P31277 HOTTIP_2.1-201ENST00000616633 376 ntBASIC8.8□□□□□ -1
HOXD11P31277 RACK1-235ENST00000626067 564 ntTSL 2 BASIC8.8□□□□□ -1
HOXD11P31277 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC8.8□□□□□ -1
HOXD11P31277 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
HOXD11P31277 TRERF1-201ENST00000340840 4174 ntTSL 5 BASIC8.8□□□□□ -1
HOXD11P31277 ITGB6-201ENST00000283249 4675 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
HOXD11P31277 SMARCA2-263ENST00000637806 7061 ntTSL 5 BASIC8.8□□□□□ -1
HOXD11P31277 CEBPG-202ENST00000585933 3845 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
HOXD11P31277 ZNF763-201ENST00000343949 2621 ntAPPRIS P2 TSL 2 BASIC8.8□□□□□ -1
HOXD11P31277 CEACAM8-201ENST00000244336 2305 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
HOXD11P31277 AL049697.1-201ENST00000507897 2301 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
HOXD11P31277 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
HOXD11P31277 OR9A4-202ENST00000641559 2018 ntAPPRIS P1 BASIC8.8□□□□□ -1
HOXD11P31277 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
HOXD11P31277 TIMELESS-201ENST00000229201 4376 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
HOXD11P31277 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC8.79□□□□□ -1
HOXD11P31277 DHX35-203ENST00000373325 3287 ntTSL 5 BASIC8.79□□□□□ -1
HOXD11P31277 ORC1-202ENST00000371568 3157 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
HOXD11P31277 RUBCN-201ENST00000273582 6955 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
HOXD11P31277 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
HOXD11P31277 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC8.79□□□□□ -1
HOXD11P31277 CACNA1S-202ENST00000367338 5996 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
HOXD11P31277 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
HOXD11P31277 WARS-238ENST00000557135 2080 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
HOXD11P31277 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC8.79□□□□□ -1
HOXD11P31277 CA5A-201ENST00000309893 7567 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
HOXD11P31277 SLFN13-211ENST00000542635 5921 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
HOXD11P31277 SLC2A14-215ENST00000542546 3120 ntTSL 5 BASIC8.79□□□□□ -1
HOXD11P31277 TEX10-204ENST00000535814 3006 ntTSL 2 BASIC8.79□□□□□ -1
HOXD11P31277 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC8.79□□□□□ -1
HOXD11P31277 CMKLR1-202ENST00000412676 5110 ntAPPRIS ALT2 TSL 3 BASIC8.79□□□□□ -1
HOXD11P31277 C7orf55-LUC7L2-201ENST00000541515 1661 ntAPPRIS P1 TSL 2 BASIC8.79□□□□□ -1
HOXD11P31277 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC8.79□□□□□ -1
HOXD11P31277 HPS4-203ENST00000402105 3562 ntTSL 1 (best) BASIC8.79□□□□□ -1
HOXD11P31277 KCTD6-201ENST00000355076 2425 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
HOXD11P31277 COPB1-202ENST00000439561 3382 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
HOXD11P31277 ZNF157-201ENST00000377073 2318 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
HOXD11P31277 C11orf57-203ENST00000420986 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC8.79□□□□□ -1
HOXD11P31277 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC8.79□□□□□ -1
HOXD11P31277 GS1-600G8.3-201ENST00000431486 2249 ntTSL 1 (best) BASIC8.79□□□□□ -1
HOXD11P31277 GPR151-201ENST00000311104 3088 ntAPPRIS P1 BASIC8.79□□□□□ -1
HOXD11P31277 MARCH6-202ENST00000449913 3062 ntTSL 2 BASIC8.79□□□□□ -1
HOXD11P31277 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC8.79□□□□□ -1
HOXD11P31277 SEZ6L2-201ENST00000308713 3801 ntAPPRIS P4 TSL 1 (best) BASIC8.79□□□□□ -1
HOXD11P31277 LELP1-201ENST00000368747 523 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
HOXD11P31277 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
HOXD11P31277 MIR636-201ENST00000384825 99 ntBASIC8.79□□□□□ -1
HOXD11P31277 MIR296-201ENST00000385215 80 ntBASIC8.79□□□□□ -1
HOXD11P31277 TRBV11-1-201ENST00000390367 364 ntAPPRIS P1 BASIC8.79□□□□□ -1
HOXD11P31277 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
HOXD11P31277 RPL24P7-201ENST00000399435 453 ntBASIC8.79□□□□□ -1
HOXD11P31277 AL355375.1-201ENST00000405686 392 ntBASIC8.79□□□□□ -1
HOXD11P31277 MIR1255A-201ENST00000408338 113 ntBASIC8.79□□□□□ -1
HOXD11P31277 CYCSP52-201ENST00000422857 310 ntBASIC8.79□□□□□ -1
HOXD11P31277 AL133244.1-201ENST00000456007 258 ntBASIC8.79□□□□□ -1
HOXD11P31277 CREB3L2-205ENST00000458726 776 ntTSL 3 BASIC8.79□□□□□ -1
HOXD11P31277 AL035660.2-201ENST00000461248 556 ntTSL 2 BASIC8.79□□□□□ -1
HOXD11P31277 AC007207.1-201ENST00000489396 555 ntBASIC8.79□□□□□ -1
HOXD11P31277 AC021491.1-201ENST00000502300 349 ntTSL 5 BASIC8.79□□□□□ -1
HOXD11P31277 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC8.79□□□□□ -1
HOXD11P31277 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC8.79□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms