Protein–RNA interactions for Protein: P28370

SMARCA1, Probable global transcription activator SNF2L1, humanhuman

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1P28370 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.52□□□□□ -1.53
SMARCA1P28370 AP003461.1-201ENST00000528866 78 ntBASIC5.52□□□□□ -1.53
SMARCA1P28370 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.52□□□□□ -1.53
SMARCA1P28370 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.52□□□□□ -1.53
SMARCA1P28370 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
SMARCA1P28370 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.52□□□□□ -1.53
SMARCA1P28370 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.52□□□□□ -1.53
SMARCA1P28370 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC5.52□□□□□ -1.53
SMARCA1P28370 MIR3912-201ENST00000577566 105 ntBASIC5.52□□□□□ -1.53
SMARCA1P28370 MIR4700-201ENST00000578311 74 ntBASIC5.52□□□□□ -1.53
SMARCA1P28370 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.52□□□□□ -1.53
SMARCA1P28370 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC5.52□□□□□ -1.53
SMARCA1P28370 AC015726.1-201ENST00000602353 681 ntBASIC5.52□□□□□ -1.53
SMARCA1P28370 AC243654.2-201ENST00000612843 443 ntBASIC5.52□□□□□ -1.53
SMARCA1P28370 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SMARCA1P28370 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SMARCA1P28370 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.52□□□□□ -1.53
SMARCA1P28370 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.52□□□□□ -1.53
SMARCA1P28370 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
SMARCA1P28370 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SMARCA1P28370 AL442639.1-201ENST00000625030 1899 ntBASIC5.51□□□□□ -1.53
SMARCA1P28370 AL445437.1-201ENST00000623157 3087 ntBASIC5.51□□□□□ -1.53
SMARCA1P28370 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
SMARCA1P28370 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
SMARCA1P28370 AL022322.2-201ENST00000624072 20397 ntBASIC5.51□□□□□ -1.53
SMARCA1P28370 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
SMARCA1P28370 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
SMARCA1P28370 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
SMARCA1P28370 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
SMARCA1P28370 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.51□□□□□ -1.53
SMARCA1P28370 RN7SKP103-201ENST00000363848 320 ntBASIC5.51□□□□□ -1.53
SMARCA1P28370 Y_RNA.192-201ENST00000363977 102 ntBASIC5.51□□□□□ -1.53
SMARCA1P28370 RNU6-157P-201ENST00000383957 107 ntBASIC5.51□□□□□ -1.53
SMARCA1P28370 Y_RNA.465-201ENST00000384293 102 ntBASIC5.51□□□□□ -1.53
SMARCA1P28370 ARL4AP5-201ENST00000404372 599 ntBASIC5.51□□□□□ -1.53
SMARCA1P28370 RNU4-72P-201ENST00000410754 173 ntBASIC5.51□□□□□ -1.53
SMARCA1P28370 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC5.51□□□□□ -1.53
SMARCA1P28370 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5.51□□□□□ -1.53
SMARCA1P28370 USP9YP26-201ENST00000421008 661 ntBASIC5.51□□□□□ -1.53
SMARCA1P28370 RPL7P53-201ENST00000421245 739 ntBASIC5.51□□□□□ -1.53
SMARCA1P28370 VN1R108P-201ENST00000431580 830 ntBASIC5.51□□□□□ -1.53
SMARCA1P28370 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC5.51□□□□□ -1.53
SMARCA1P28370 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.51□□□□□ -1.53
SMARCA1P28370 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC5.51□□□□□ -1.53
SMARCA1P28370 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.51□□□□□ -1.53
SMARCA1P28370 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC5.51□□□□□ -1.53
SMARCA1P28370 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC5.51□□□□□ -1.53
SMARCA1P28370 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.51□□□□□ -1.53
SMARCA1P28370 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC5.51□□□□□ -1.53
SMARCA1P28370 AC073358.1-201ENST00000505671 684 ntBASIC5.51□□□□□ -1.53
SMARCA1P28370 AC091868.1-201ENST00000508746 304 ntBASIC5.51□□□□□ -1.53
SMARCA1P28370 CDH12P4-201ENST00000517835 295 ntBASIC5.51□□□□□ -1.53
SMARCA1P28370 CDH12P3-201ENST00000517935 295 ntBASIC5.51□□□□□ -1.53
SMARCA1P28370 CDH12P1-201ENST00000518435 295 ntBASIC5.51□□□□□ -1.53
SMARCA1P28370 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC5.51□□□□□ -1.53
SMARCA1P28370 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.51□□□□□ -1.53
SMARCA1P28370 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.51□□□□□ -1.53
SMARCA1P28370 AC010198.2-201ENST00000550612 259 ntBASIC5.51□□□□□ -1.53
SMARCA1P28370 FKBP1BP1-201ENST00000553366 325 ntBASIC5.51□□□□□ -1.53
SMARCA1P28370 AL110118.1-201ENST00000553543 400 ntBASIC5.51□□□□□ -1.53
SMARCA1P28370 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.51□□□□□ -1.53
SMARCA1P28370 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.51□□□□□ -1.53
SMARCA1P28370 AC008015.1-201ENST00000555505 465 ntBASIC5.51□□□□□ -1.53
SMARCA1P28370 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC5.51□□□□□ -1.53
SMARCA1P28370 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC5.51□□□□□ -1.53
SMARCA1P28370 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.51□□□□□ -1.53
SMARCA1P28370 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC5.51□□□□□ -1.53
SMARCA1P28370 RN7SL690P-201ENST00000582087 240 ntBASIC5.51□□□□□ -1.53
SMARCA1P28370 VN1R88P-201ENST00000596787 292 ntBASIC5.51□□□□□ -1.53
SMARCA1P28370 AC110760.3-201ENST00000598794 467 ntBASIC5.51□□□□□ -1.53
SMARCA1P28370 AL392048.1-201ENST00000613946 534 ntBASIC5.51□□□□□ -1.53
SMARCA1P28370 AC103706.2-201ENST00000638080 240 ntBASIC5.51□□□□□ -1.53
SMARCA1P28370 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC5.51□□□□□ -1.53
SMARCA1P28370 DDX18P3-201ENST00000404856 2007 ntBASIC5.51□□□□□ -1.53
SMARCA1P28370 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC5.51□□□□□ -1.53
SMARCA1P28370 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
SMARCA1P28370 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.51□□□□□ -1.53
SMARCA1P28370 AL450326.2-201ENST00000421913 1962 ntBASIC5.51□□□□□ -1.53
SMARCA1P28370 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
SMARCA1P28370 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.51□□□□□ -1.53
SMARCA1P28370 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SMARCA1P28370 ZNF736P9Y-201ENST00000439586 1345 ntBASIC5.5□□□□□ -1.53
SMARCA1P28370 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.5□□□□□ -1.53
SMARCA1P28370 AC025574.1-201ENST00000554784 1653 ntBASIC5.5□□□□□ -1.53
SMARCA1P28370 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.5□□□□□ -1.53
SMARCA1P28370 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SMARCA1P28370 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.5□□□□□ -1.53
SMARCA1P28370 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SMARCA1P28370 MIR1302-8-201ENST00000408342 128 ntBASIC5.5□□□□□ -1.53
SMARCA1P28370 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.5□□□□□ -1.53
SMARCA1P28370 CTSL3P-202ENST00000412179 788 ntBASIC5.5□□□□□ -1.53
SMARCA1P28370 GAPDHP49-201ENST00000421421 961 ntBASIC5.5□□□□□ -1.53
SMARCA1P28370 AC011233.1-201ENST00000422812 283 ntBASIC5.5□□□□□ -1.53
SMARCA1P28370 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC5.5□□□□□ -1.53
SMARCA1P28370 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.5□□□□□ -1.53
SMARCA1P28370 UBE2D3P1-201ENST00000436669 444 ntBASIC5.5□□□□□ -1.53
SMARCA1P28370 NPM1P33-201ENST00000438918 872 ntBASIC5.5□□□□□ -1.53
SMARCA1P28370 KATNBL1P3-201ENST00000443475 909 ntBASIC5.5□□□□□ -1.53
SMARCA1P28370 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.5□□□□□ -1.53
SMARCA1P28370 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms