Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AC079168.1-201ENST00000458741 345 ntBASIC6.79□□□□□ -1.32
VARSP26640 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC6.79□□□□□ -1.32
VARSP26640 RPL23AP11-201ENST00000475260 469 ntBASIC6.79□□□□□ -1.32
VARSP26640 RN7SL741P-201ENST00000482473 289 ntBASIC6.79□□□□□ -1.32
VARSP26640 RPL10P7-201ENST00000495649 625 ntBASIC6.79□□□□□ -1.32
VARSP26640 AC109481.1-201ENST00000509173 282 ntBASIC6.79□□□□□ -1.32
VARSP26640 RNA5SP518-201ENST00000515957 119 ntBASIC6.79□□□□□ -1.32
VARSP26640 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC6.79□□□□□ -1.32
VARSP26640 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC6.79□□□□□ -1.32
VARSP26640 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC6.79□□□□□ -1.32
VARSP26640 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC6.79□□□□□ -1.32
VARSP26640 AL118558.2-201ENST00000556294 238 ntBASIC6.79□□□□□ -1.32
VARSP26640 PPIAP6-201ENST00000557078 499 ntBASIC6.79□□□□□ -1.32
VARSP26640 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC6.79□□□□□ -1.32
VARSP26640 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.79□□□□□ -1.32
VARSP26640 RN7SL426P-201ENST00000579106 295 ntBASIC6.79□□□□□ -1.32
VARSP26640 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC6.79□□□□□ -1.32
VARSP26640 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC6.79□□□□□ -1.32
VARSP26640 AC020634.1-201ENST00000608701 549 ntBASIC6.79□□□□□ -1.32
VARSP26640 AL031777.2-201ENST00000611953 196 ntBASIC6.79□□□□□ -1.32
VARSP26640 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC6.79□□□□□ -1.32
VARSP26640 MIR7973-1-201ENST00000614683 76 ntBASIC6.79□□□□□ -1.32
VARSP26640 AC067931.1-201ENST00000624190 671 ntBASIC6.79□□□□□ -1.32
VARSP26640 AL356585.10-201ENST00000641883 123 ntBASIC6.79□□□□□ -1.32
VARSP26640 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
VARSP26640 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
VARSP26640 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC6.79□□□□□ -1.32
VARSP26640 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC6.79□□□□□ -1.32
VARSP26640 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC6.79□□□□□ -1.32
VARSP26640 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC6.79□□□□□ -1.32
VARSP26640 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
VARSP26640 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
VARSP26640 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC6.78□□□□□ -1.32
VARSP26640 AP002800.1-201ENST00000624982 2225 ntBASIC6.78□□□□□ -1.32
VARSP26640 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
VARSP26640 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
VARSP26640 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC6.78□□□□□ -1.32
VARSP26640 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.78□□□□□ -1.32
VARSP26640 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.78□□□□□ -1.32
VARSP26640 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
VARSP26640 API5-210ENST00000534600 1760 ntTSL 5 BASIC6.78□□□□□ -1.32
VARSP26640 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC6.78□□□□□ -1.32
VARSP26640 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
VARSP26640 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
VARSP26640 Y_RNA.512-201ENST00000384518 102 ntBASIC6.78□□□□□ -1.32
VARSP26640 AL360271.1-201ENST00000395679 510 ntBASIC6.78□□□□□ -1.32
VARSP26640 RNU4-6P-201ENST00000410804 122 ntBASIC6.78□□□□□ -1.32
VARSP26640 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
VARSP26640 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC6.78□□□□□ -1.32
VARSP26640 SKA2P1-201ENST00000425592 390 ntBASIC6.78□□□□□ -1.32
VARSP26640 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC6.78□□□□□ -1.32
VARSP26640 ZDHHC20P1-204ENST00000435787 423 ntBASIC6.78□□□□□ -1.32
VARSP26640 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC6.78□□□□□ -1.32
VARSP26640 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC6.78□□□□□ -1.32
VARSP26640 RPL36AP15-201ENST00000444514 266 ntBASIC6.78□□□□□ -1.32
VARSP26640 AL445466.1-201ENST00000448432 357 ntBASIC6.78□□□□□ -1.32
VARSP26640 PPIAP32-201ENST00000449940 472 ntBASIC6.78□□□□□ -1.32
VARSP26640 CBX5P1-201ENST00000468470 561 ntBASIC6.78□□□□□ -1.32
VARSP26640 PABPC1P3-201ENST00000469174 459 ntBASIC6.78□□□□□ -1.32
VARSP26640 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC6.78□□□□□ -1.32
VARSP26640 HMGB3P17-201ENST00000504195 649 ntBASIC6.78□□□□□ -1.32
VARSP26640 AC091849.1-201ENST00000509920 121 ntBASIC6.78□□□□□ -1.32
VARSP26640 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC6.78□□□□□ -1.32
VARSP26640 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC6.78□□□□□ -1.32
VARSP26640 RNU6-202P-201ENST00000515998 96 ntBASIC6.78□□□□□ -1.32
VARSP26640 IGHVII-51-2-201ENST00000519778 259 ntBASIC6.78□□□□□ -1.32
VARSP26640 MAL2-208ENST00000523307 556 ntTSL 4 BASIC6.78□□□□□ -1.32
VARSP26640 AP005435.4-201ENST00000529514 284 ntBASIC6.78□□□□□ -1.32
VARSP26640 AP000907.2-201ENST00000530827 353 ntBASIC6.78□□□□□ -1.32
VARSP26640 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC6.78□□□□□ -1.32
VARSP26640 APPL2-203ENST00000546731 684 ntTSL 2 BASIC6.78□□□□□ -1.32
VARSP26640 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.78□□□□□ -1.32
VARSP26640 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC6.78□□□□□ -1.32
VARSP26640 SNORD39.3-201ENST00000584451 71 ntBASIC6.78□□□□□ -1.32
VARSP26640 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC6.78□□□□□ -1.32
VARSP26640 GLUD1P4-201ENST00000590914 418 ntBASIC6.78□□□□□ -1.32
VARSP26640 AC011447.2-201ENST00000592921 283 ntBASIC6.78□□□□□ -1.32
VARSP26640 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC6.78□□□□□ -1.32
VARSP26640 ATP1B3P1-201ENST00000605365 821 ntBASIC6.78□□□□□ -1.32
VARSP26640 AC122710.3-201ENST00000606566 541 ntBASIC6.78□□□□□ -1.32
VARSP26640 OR6R2P-201ENST00000609216 300 ntBASIC6.78□□□□□ -1.32
VARSP26640 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC6.78□□□□□ -1.32
VARSP26640 AL121612.2-201ENST00000612261 482 ntBASIC6.78□□□□□ -1.32
VARSP26640 AL352984.2-202ENST00000613699 155 ntBASIC6.78□□□□□ -1.32
VARSP26640 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC6.78□□□□□ -1.32
VARSP26640 AL669831.3-213ENST00000636676 183 ntBASIC6.78□□□□□ -1.32
VARSP26640 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.78□□□□□ -1.32
VARSP26640 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC6.78□□□□□ -1.32
VARSP26640 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.78□□□□□ -1.32
VARSP26640 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
VARSP26640 JPX-212ENST00000639185 9658 ntTSL 5 BASIC6.78□□□□□ -1.32
VARSP26640 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
VARSP26640 OLMALINC-203ENST00000641087 3779 ntBASIC6.78□□□□□ -1.32
VARSP26640 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
VARSP26640 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC6.78□□□□□ -1.32
VARSP26640 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC6.78□□□□□ -1.32
VARSP26640 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
VARSP26640 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.77□□□□□ -1.32
VARSP26640 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
VARSP26640 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms