Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 RNA5SP228-201ENST00000516232 133 ntBASIC5.05□□□□□ -1.6
CD40P25942 MTCO2P4-201ENST00000517968 247 ntBASIC5.05□□□□□ -1.6
CD40P25942 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.05□□□□□ -1.6
CD40P25942 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC5.05□□□□□ -1.6
CD40P25942 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.05□□□□□ -1.6
CD40P25942 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC5.05□□□□□ -1.6
CD40P25942 UBE2FP2-201ENST00000566646 462 ntBASIC5.05□□□□□ -1.6
CD40P25942 AC010547.6-201ENST00000571789 193 ntBASIC5.05□□□□□ -1.6
CD40P25942 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.05□□□□□ -1.6
CD40P25942 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.05□□□□□ -1.6
CD40P25942 LSM1P2-201ENST00000604911 322 ntBASIC5.05□□□□□ -1.6
CD40P25942 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.05□□□□□ -1.6
CD40P25942 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CD40P25942 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
CD40P25942 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CD40P25942 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.05□□□□□ -1.6
CD40P25942 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CD40P25942 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CD40P25942 KPNA2P2-201ENST00000419546 1489 ntBASIC5.05□□□□□ -1.6
CD40P25942 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.05□□□□□ -1.6
CD40P25942 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
CD40P25942 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
CD40P25942 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.05□□□□□ -1.6
CD40P25942 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CD40P25942 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CD40P25942 AC130304.1-201ENST00000622942 2385 ntBASIC5.05□□□□□ -1.6
CD40P25942 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
CD40P25942 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CD40P25942 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CD40P25942 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CD40P25942 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CD40P25942 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
CD40P25942 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.04□□□□□ -1.6
CD40P25942 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CD40P25942 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CD40P25942 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CD40P25942 CCT4P2-201ENST00000233836 1548 ntBASIC5.04□□□□□ -1.6
CD40P25942 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
CD40P25942 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
CD40P25942 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CD40P25942 Y_RNA.296-201ENST00000364930 108 ntBASIC5.04□□□□□ -1.6
CD40P25942 RNU6-744P-201ENST00000365557 107 ntBASIC5.04□□□□□ -1.6
CD40P25942 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CD40P25942 RNU6-1316P-201ENST00000384242 108 ntBASIC5.04□□□□□ -1.6
CD40P25942 MIR181A1-201ENST00000385026 110 ntBASIC5.04□□□□□ -1.6
CD40P25942 HMGB1P20-201ENST00000402555 677 ntBASIC5.04□□□□□ -1.6
CD40P25942 OR2AT2P-201ENST00000413438 905 ntBASIC5.04□□□□□ -1.6
CD40P25942 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.04□□□□□ -1.6
CD40P25942 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.04□□□□□ -1.6
CD40P25942 USP24P1-201ENST00000433802 779 ntBASIC5.04□□□□□ -1.6
CD40P25942 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.04□□□□□ -1.6
CD40P25942 RPS3AP38-201ENST00000435889 763 ntBASIC5.04□□□□□ -1.6
CD40P25942 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC5.04□□□□□ -1.6
CD40P25942 SUMO2P3-201ENST00000438311 288 ntBASIC5.04□□□□□ -1.6
CD40P25942 RABEPKP1-201ENST00000440529 1026 ntBASIC5.04□□□□□ -1.6
CD40P25942 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CD40P25942 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC5.04□□□□□ -1.6
CD40P25942 VDAC2P4-201ENST00000452925 711 ntBASIC5.04□□□□□ -1.6
CD40P25942 OFD1P4Y-201ENST00000455273 1179 ntBASIC5.04□□□□□ -1.6
CD40P25942 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.04□□□□□ -1.6
CD40P25942 AC027673.1-201ENST00000456245 405 ntBASIC5.04□□□□□ -1.6
CD40P25942 AL445687.2-201ENST00000458156 728 ntBASIC5.04□□□□□ -1.6
CD40P25942 RNU1-88P-201ENST00000459274 128 ntBASIC5.04□□□□□ -1.6
CD40P25942 AC010683.1-201ENST00000473673 378 ntBASIC5.04□□□□□ -1.6
CD40P25942 AC104563.1-201ENST00000476147 376 ntBASIC5.04□□□□□ -1.6
CD40P25942 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.04□□□□□ -1.6
CD40P25942 RN7SL717P-201ENST00000478343 297 ntBASIC5.04□□□□□ -1.6
CD40P25942 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CD40P25942 AC012170.1-201ENST00000495139 359 ntBASIC5.04□□□□□ -1.6
CD40P25942 AC093767.1-201ENST00000504523 156 ntBASIC5.04□□□□□ -1.6
CD40P25942 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC5.04□□□□□ -1.6
CD40P25942 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.04□□□□□ -1.6
CD40P25942 MIR2117-201ENST00000516780 80 ntBASIC5.04□□□□□ -1.6
CD40P25942 AP003467.2-201ENST00000520175 319 ntBASIC5.04□□□□□ -1.6
CD40P25942 IGLV3-30-201ENST00000524362 298 ntBASIC5.04□□□□□ -1.6
CD40P25942 AC027544.3-201ENST00000535082 757 ntBASIC5.04□□□□□ -1.6
CD40P25942 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CD40P25942 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.04□□□□□ -1.6
CD40P25942 AL049779.3-201ENST00000557141 606 ntBASIC5.04□□□□□ -1.6
CD40P25942 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.04□□□□□ -1.6
CD40P25942 AL157394.1-201ENST00000562983 1224 ntBASIC5.04□□□□□ -1.6
CD40P25942 AC124068.1-201ENST00000563131 678 ntBASIC5.04□□□□□ -1.6
CD40P25942 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC5.04□□□□□ -1.6
CD40P25942 MTCO3P24-201ENST00000572729 782 ntBASIC5.04□□□□□ -1.6
CD40P25942 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.04□□□□□ -1.6
CD40P25942 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC5.04□□□□□ -1.6
CD40P25942 AL359999.1-201ENST00000604513 294 ntBASIC5.04□□□□□ -1.6
CD40P25942 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC5.04□□□□□ -1.6
CD40P25942 RNA5SP440-201ENST00000612665 119 ntBASIC5.04□□□□□ -1.6
CD40P25942 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.04□□□□□ -1.6
CD40P25942 UBE2Q2P2-203ENST00000613592 761 ntBASIC5.04□□□□□ -1.6
CD40P25942 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CD40P25942 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC5.04□□□□□ -1.6
CD40P25942 AC004520.1-201ENST00000608362 1413 ntBASIC5.04□□□□□ -1.6
CD40P25942 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
CD40P25942 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CD40P25942 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CD40P25942 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CD40P25942 CASC19-221ENST00000641309 1382 ntBASIC5.04□□□□□ -1.6
CD40P25942 AC026523.2-201ENST00000625039 7739 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms