Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.29□□□□□ -1.88
COL8A2P25067 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC3.29□□□□□ -1.88
COL8A2P25067 AC068020.1-201ENST00000594215 661 ntBASIC3.29□□□□□ -1.88
COL8A2P25067 AC112230.1-201ENST00000604342 547 ntBASIC3.29□□□□□ -1.88
COL8A2P25067 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.29□□□□□ -1.88
COL8A2P25067 AC004241.3-201ENST00000611728 517 ntBASIC3.29□□□□□ -1.88
COL8A2P25067 AL392048.1-201ENST00000613946 534 ntBASIC3.29□□□□□ -1.88
COL8A2P25067 AL121772.2-201ENST00000614331 297 ntBASIC3.29□□□□□ -1.88
COL8A2P25067 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC3.29□□□□□ -1.88
COL8A2P25067 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
COL8A2P25067 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
COL8A2P25067 CARF-208ENST00000428585 2513 ntTSL 2 BASIC3.29□□□□□ -1.88
COL8A2P25067 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
COL8A2P25067 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
COL8A2P25067 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC3.28□□□□□ -1.88
COL8A2P25067 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
COL8A2P25067 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC3.28□□□□□ -1.88
COL8A2P25067 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
COL8A2P25067 OR11H5P-202ENST00000641612 1325 ntBASIC3.28□□□□□ -1.88
COL8A2P25067 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
COL8A2P25067 OR4A15-201ENST00000314706 1035 ntBASIC3.28□□□□□ -1.88
COL8A2P25067 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
COL8A2P25067 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
COL8A2P25067 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
COL8A2P25067 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC3.28□□□□□ -1.88
COL8A2P25067 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC3.28□□□□□ -1.88
COL8A2P25067 TRIM60P17-201ENST00000415181 719 ntBASIC3.28□□□□□ -1.88
COL8A2P25067 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC3.28□□□□□ -1.88
COL8A2P25067 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC3.28□□□□□ -1.88
COL8A2P25067 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
COL8A2P25067 TPTE2P1-204ENST00000435256 593 ntBASIC3.28□□□□□ -1.88
COL8A2P25067 HMGB1P37-201ENST00000439613 609 ntBASIC3.28□□□□□ -1.88
COL8A2P25067 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC3.28□□□□□ -1.88
COL8A2P25067 CYCSP53-201ENST00000455540 265 ntBASIC3.28□□□□□ -1.88
COL8A2P25067 ACTR3P3-201ENST00000480448 893 ntBASIC3.28□□□□□ -1.88
COL8A2P25067 RPS26P15-201ENST00000488067 348 ntBASIC3.28□□□□□ -1.88
COL8A2P25067 MTHFD2P4-201ENST00000515074 1025 ntBASIC3.28□□□□□ -1.88
COL8A2P25067 RNU4-18P-201ENST00000516751 149 ntBASIC3.28□□□□□ -1.88
COL8A2P25067 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.28□□□□□ -1.88
COL8A2P25067 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.28□□□□□ -1.88
COL8A2P25067 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC3.28□□□□□ -1.88
COL8A2P25067 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.28□□□□□ -1.88
COL8A2P25067 AC084033.1-201ENST00000550830 633 ntBASIC3.28□□□□□ -1.88
COL8A2P25067 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
COL8A2P25067 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.28□□□□□ -1.88
COL8A2P25067 AP000255.1-201ENST00000610276 676 ntBASIC3.28□□□□□ -1.88
COL8A2P25067 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
COL8A2P25067 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
COL8A2P25067 AL591424.2-201ENST00000617023 128 ntBASIC3.28□□□□□ -1.88
COL8A2P25067 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
COL8A2P25067 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
COL8A2P25067 AC039056.2-201ENST00000622261 511 ntBASIC3.28□□□□□ -1.88
COL8A2P25067 AC018555.1-201ENST00000567548 1980 ntBASIC3.28□□□□□ -1.88
COL8A2P25067 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.28□□□□□ -1.88
COL8A2P25067 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
COL8A2P25067 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
COL8A2P25067 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC3.27□□□□□ -1.89
COL8A2P25067 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
COL8A2P25067 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
COL8A2P25067 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
COL8A2P25067 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
COL8A2P25067 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
COL8A2P25067 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
COL8A2P25067 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
COL8A2P25067 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
COL8A2P25067 MIR3074-201ENST00000384885 81 ntBASIC3.27□□□□□ -1.89
COL8A2P25067 MIR200C-201ENST00000384980 68 ntBASIC3.27□□□□□ -1.89
COL8A2P25067 AC104297.1-201ENST00000393779 870 ntBASIC3.27□□□□□ -1.89
COL8A2P25067 SNORA57.3-201ENST00000411095 141 ntBASIC3.27□□□□□ -1.89
COL8A2P25067 RAB9AP3-201ENST00000412737 573 ntBASIC3.27□□□□□ -1.89
COL8A2P25067 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
COL8A2P25067 MTND2P15-201ENST00000418575 892 ntBASIC3.27□□□□□ -1.89
COL8A2P25067 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.27□□□□□ -1.89
COL8A2P25067 AL389915.1-201ENST00000422463 466 ntBASIC3.27□□□□□ -1.89
COL8A2P25067 MTND2P11-201ENST00000423638 648 ntBASIC3.27□□□□□ -1.89
COL8A2P25067 OR4F13P-201ENST00000428478 931 ntBASIC3.27□□□□□ -1.89
COL8A2P25067 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.27□□□□□ -1.89
COL8A2P25067 AL035246.1-201ENST00000433554 1255 ntBASIC3.27□□□□□ -1.89
COL8A2P25067 BMS1P19-201ENST00000433925 393 ntBASIC3.27□□□□□ -1.89
COL8A2P25067 HMGB3P10-201ENST00000434734 572 ntBASIC3.27□□□□□ -1.89
COL8A2P25067 AL138787.1-202ENST00000437804 898 ntBASIC3.27□□□□□ -1.89
COL8A2P25067 NOTCH2P1-201ENST00000443481 624 ntBASIC3.27□□□□□ -1.89
COL8A2P25067 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.27□□□□□ -1.89
COL8A2P25067 RAB9AP1-201ENST00000449393 573 ntBASIC3.27□□□□□ -1.89
COL8A2P25067 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC3.27□□□□□ -1.89
COL8A2P25067 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.27□□□□□ -1.89
COL8A2P25067 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC3.27□□□□□ -1.89
COL8A2P25067 AP002812.1-201ENST00000495378 474 ntBASIC3.27□□□□□ -1.89
COL8A2P25067 AP000926.3-201ENST00000497201 299 ntBASIC3.27□□□□□ -1.89
COL8A2P25067 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.27□□□□□ -1.89
COL8A2P25067 PRELID3BP7-201ENST00000503606 469 ntBASIC3.27□□□□□ -1.89
COL8A2P25067 AC113398.2-201ENST00000507630 558 ntBASIC3.27□□□□□ -1.89
COL8A2P25067 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.27□□□□□ -1.89
COL8A2P25067 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC3.27□□□□□ -1.89
COL8A2P25067 TRMT10BP1-201ENST00000519377 943 ntBASIC3.27□□□□□ -1.89
COL8A2P25067 VTA1P2-201ENST00000520205 911 ntBASIC3.27□□□□□ -1.89
COL8A2P25067 AC087369.1-201ENST00000520775 996 ntBASIC3.27□□□□□ -1.89
COL8A2P25067 AC022695.1-201ENST00000522089 237 ntBASIC3.27□□□□□ -1.89
COL8A2P25067 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC3.27□□□□□ -1.89
COL8A2P25067 NPM1P47-201ENST00000560843 856 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms