Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AC008555.7-201ENST00000605008 583 ntBASIC6.85□□□□□ -1.31
RFX1P22670 AC121334.2-201ENST00000605387 271 ntBASIC6.85□□□□□ -1.31
RFX1P22670 SNORA74.4-201ENST00000607595 199 ntBASIC6.85□□□□□ -1.31
RFX1P22670 AC019193.2-201ENST00000610012 634 ntBASIC6.85□□□□□ -1.31
RFX1P22670 AC090527.3-201ENST00000619041 548 ntBASIC6.85□□□□□ -1.31
RFX1P22670 MIR7159-201ENST00000620587 66 ntBASIC6.85□□□□□ -1.31
RFX1P22670 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
RFX1P22670 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
RFX1P22670 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
RFX1P22670 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC6.85□□□□□ -1.31
RFX1P22670 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.85□□□□□ -1.31
RFX1P22670 AC020633.1-201ENST00000468439 2247 ntBASIC6.85□□□□□ -1.31
RFX1P22670 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
RFX1P22670 AL136984.1-201ENST00000607611 1893 ntBASIC6.85□□□□□ -1.31
RFX1P22670 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.85□□□□□ -1.31
RFX1P22670 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
RFX1P22670 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
RFX1P22670 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
RFX1P22670 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
RFX1P22670 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.84□□□□□ -1.31
RFX1P22670 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC6.84□□□□□ -1.31
RFX1P22670 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
RFX1P22670 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
RFX1P22670 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.84□□□□□ -1.31
RFX1P22670 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.84□□□□□ -1.31
RFX1P22670 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC6.84□□□□□ -1.31
RFX1P22670 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
RFX1P22670 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.84□□□□□ -1.31
RFX1P22670 MFSD4BP1-201ENST00000513330 1552 ntBASIC6.84□□□□□ -1.31
RFX1P22670 COX6B1P3-201ENST00000312310 260 ntBASIC6.84□□□□□ -1.31
RFX1P22670 RNU6-853P-201ENST00000364306 107 ntBASIC6.84□□□□□ -1.31
RFX1P22670 RN7SKP69-201ENST00000365390 305 ntBASIC6.84□□□□□ -1.31
RFX1P22670 RNU6-1293P-201ENST00000384077 107 ntBASIC6.84□□□□□ -1.31
RFX1P22670 RNU6-878P-201ENST00000384578 110 ntBASIC6.84□□□□□ -1.31
RFX1P22670 Y_RNA.535-201ENST00000384612 99 ntBASIC6.84□□□□□ -1.31
RFX1P22670 RN7SKP229-201ENST00000410465 302 ntBASIC6.84□□□□□ -1.31
RFX1P22670 RN7SKP206-201ENST00000410823 293 ntBASIC6.84□□□□□ -1.31
RFX1P22670 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.84□□□□□ -1.31
RFX1P22670 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.84□□□□□ -1.31
RFX1P22670 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.84□□□□□ -1.31
RFX1P22670 SNRPGP6-201ENST00000451124 220 ntBASIC6.84□□□□□ -1.31
RFX1P22670 RPS20P32-201ENST00000456044 356 ntBASIC6.84□□□□□ -1.31
RFX1P22670 AC022364.2-201ENST00000457963 554 ntBASIC6.84□□□□□ -1.31
RFX1P22670 AC093267.1-201ENST00000489176 961 ntBASIC6.84□□□□□ -1.31
RFX1P22670 AC011005.3-201ENST00000491624 395 ntBASIC6.84□□□□□ -1.31
RFX1P22670 RPL30P11-201ENST00000495304 339 ntBASIC6.84□□□□□ -1.31
RFX1P22670 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.84□□□□□ -1.31
RFX1P22670 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC6.84□□□□□ -1.31
RFX1P22670 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC6.84□□□□□ -1.31
RFX1P22670 RNA5SP400-201ENST00000517155 111 ntBASIC6.84□□□□□ -1.31
RFX1P22670 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC6.84□□□□□ -1.31
RFX1P22670 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.84□□□□□ -1.31
RFX1P22670 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC6.84□□□□□ -1.31
RFX1P22670 RPA2P3-201ENST00000533268 770 ntBASIC6.84□□□□□ -1.31
RFX1P22670 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
RFX1P22670 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC6.84□□□□□ -1.31
RFX1P22670 SUB1P2-201ENST00000556401 297 ntBASIC6.84□□□□□ -1.31
RFX1P22670 TPRX1P1-201ENST00000557620 319 ntBASIC6.84□□□□□ -1.31
RFX1P22670 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC6.84□□□□□ -1.31
RFX1P22670 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC6.84□□□□□ -1.31
RFX1P22670 AC092332.1-201ENST00000563684 829 ntBASIC6.84□□□□□ -1.31
RFX1P22670 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.84□□□□□ -1.31
RFX1P22670 MIR4443-201ENST00000585052 53 ntBASIC6.84□□□□□ -1.31
RFX1P22670 MIR6864-201ENST00000617935 70 ntBASIC6.84□□□□□ -1.31
RFX1P22670 RNU6-156P-201ENST00000621869 107 ntBASIC6.84□□□□□ -1.31
RFX1P22670 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
RFX1P22670 PANDAR-201ENST00000629595 1506 ntBASIC6.84□□□□□ -1.31
RFX1P22670 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
RFX1P22670 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
RFX1P22670 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
RFX1P22670 AC011416.1-201ENST00000514947 1732 ntBASIC6.84□□□□□ -1.31
RFX1P22670 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
RFX1P22670 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.84□□□□□ -1.32
RFX1P22670 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
RFX1P22670 AC068769.1-201ENST00000474767 2426 ntBASIC6.84□□□□□ -1.32
RFX1P22670 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.83□□□□□ -1.32
RFX1P22670 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.83□□□□□ -1.32
RFX1P22670 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.83□□□□□ -1.32
RFX1P22670 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
RFX1P22670 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
RFX1P22670 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.83□□□□□ -1.32
RFX1P22670 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC6.83□□□□□ -1.32
RFX1P22670 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
RFX1P22670 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
RFX1P22670 RPS21P8-201ENST00000413365 247 ntBASIC6.83□□□□□ -1.32
RFX1P22670 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC6.83□□□□□ -1.32
RFX1P22670 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC6.83□□□□□ -1.32
RFX1P22670 OSTCP4-201ENST00000424397 449 ntBASIC6.83□□□□□ -1.32
RFX1P22670 AL513185.2-201ENST00000425543 193 ntBASIC6.83□□□□□ -1.32
RFX1P22670 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC6.83□□□□□ -1.32
RFX1P22670 AC093019.1-201ENST00000443135 252 ntBASIC6.83□□□□□ -1.32
RFX1P22670 HMGN1P36-201ENST00000446623 298 ntBASIC6.83□□□□□ -1.32
RFX1P22670 EEF1A1P1-201ENST00000447052 739 ntBASIC6.83□□□□□ -1.32
RFX1P22670 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC6.83□□□□□ -1.32
RFX1P22670 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC6.83□□□□□ -1.32
RFX1P22670 RAD23BP3-201ENST00000454157 1152 ntBASIC6.83□□□□□ -1.32
RFX1P22670 RN7SL643P-201ENST00000471845 291 ntBASIC6.83□□□□□ -1.32
RFX1P22670 RN7SL714P-201ENST00000487050 298 ntBASIC6.83□□□□□ -1.32
RFX1P22670 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC6.83□□□□□ -1.32
RFX1P22670 NENFP3-201ENST00000503735 313 ntBASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 128.7 ms