Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.44□□□□□ -1.86
ATF1P18846 RPL23AP38-201ENST00000423801 469 ntBASIC3.44□□□□□ -1.86
ATF1P18846 RPL30P3-201ENST00000424262 333 ntBASIC3.44□□□□□ -1.86
ATF1P18846 OR5BE1P-201ENST00000425977 939 ntBASIC3.44□□□□□ -1.86
ATF1P18846 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.44□□□□□ -1.86
ATF1P18846 SKP1P1-201ENST00000438081 489 ntBASIC3.44□□□□□ -1.86
ATF1P18846 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.44□□□□□ -1.86
ATF1P18846 RNU7-27P-201ENST00000459281 62 ntBASIC3.44□□□□□ -1.86
ATF1P18846 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC3.44□□□□□ -1.86
ATF1P18846 RPS29P22-201ENST00000472363 168 ntBASIC3.44□□□□□ -1.86
ATF1P18846 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.44□□□□□ -1.86
ATF1P18846 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.44□□□□□ -1.86
ATF1P18846 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.44□□□□□ -1.86
ATF1P18846 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.44□□□□□ -1.86
ATF1P18846 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
ATF1P18846 AC092747.2-201ENST00000545069 983 ntBASIC3.44□□□□□ -1.86
ATF1P18846 CBX3P5-201ENST00000552017 521 ntBASIC3.44□□□□□ -1.86
ATF1P18846 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC3.44□□□□□ -1.86
ATF1P18846 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.44□□□□□ -1.86
ATF1P18846 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC3.44□□□□□ -1.86
ATF1P18846 SS18L2P2-201ENST00000583960 235 ntBASIC3.44□□□□□ -1.86
ATF1P18846 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.44□□□□□ -1.86
ATF1P18846 AC009303.3-201ENST00000591103 736 ntBASIC3.44□□□□□ -1.86
ATF1P18846 IPO5P1-202ENST00000600039 287 ntBASIC3.44□□□□□ -1.86
ATF1P18846 AC020910.2-201ENST00000603635 610 ntBASIC3.44□□□□□ -1.86
ATF1P18846 AL137246.1-201ENST00000607072 977 ntBASIC3.44□□□□□ -1.86
ATF1P18846 AC243654.2-201ENST00000612843 443 ntBASIC3.44□□□□□ -1.86
ATF1P18846 AC139769.3-201ENST00000618383 175 ntBASIC3.44□□□□□ -1.86
ATF1P18846 MIR6730-201ENST00000622213 67 ntBASIC3.44□□□□□ -1.86
ATF1P18846 AC091905.1-201ENST00000624400 311 ntBASIC3.44□□□□□ -1.86
ATF1P18846 AC011944.2-201ENST00000624440 683 ntBASIC3.44□□□□□ -1.86
ATF1P18846 AC116563.2-201ENST00000624751 535 ntBASIC3.44□□□□□ -1.86
ATF1P18846 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC3.44□□□□□ -1.86
ATF1P18846 OR5BE1P-202ENST00000641168 1176 ntBASIC3.44□□□□□ -1.86
ATF1P18846 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
ATF1P18846 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
ATF1P18846 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
ATF1P18846 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
ATF1P18846 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.43□□□□□ -1.86
ATF1P18846 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
ATF1P18846 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
ATF1P18846 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
ATF1P18846 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.43□□□□□ -1.86
ATF1P18846 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.43□□□□□ -1.86
ATF1P18846 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
ATF1P18846 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
ATF1P18846 RNU6-386P-201ENST00000362650 107 ntBASIC3.43□□□□□ -1.86
ATF1P18846 RNU1-87P-201ENST00000363727 170 ntBASIC3.43□□□□□ -1.86
ATF1P18846 HLFP1-201ENST00000402375 499 ntBASIC3.43□□□□□ -1.86
ATF1P18846 AC013404.1-201ENST00000413068 249 ntBASIC3.43□□□□□ -1.86
ATF1P18846 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC3.43□□□□□ -1.86
ATF1P18846 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC3.43□□□□□ -1.86
ATF1P18846 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.43□□□□□ -1.86
ATF1P18846 AC009480.2-201ENST00000422916 432 ntBASIC3.43□□□□□ -1.86
ATF1P18846 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC3.43□□□□□ -1.86
ATF1P18846 HIGD1AP4-201ENST00000430194 280 ntBASIC3.43□□□□□ -1.86
ATF1P18846 VN1R48P-201ENST00000448149 1036 ntBASIC3.43□□□□□ -1.86
ATF1P18846 RPS29P33-201ENST00000456717 146 ntBASIC3.43□□□□□ -1.86
ATF1P18846 AC006511.1-201ENST00000470614 315 ntBASIC3.43□□□□□ -1.86
ATF1P18846 UQCRHP4-201ENST00000471686 272 ntBASIC3.43□□□□□ -1.86
ATF1P18846 RN7SL860P-201ENST00000473738 223 ntBASIC3.43□□□□□ -1.86
ATF1P18846 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC3.43□□□□□ -1.86
ATF1P18846 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.43□□□□□ -1.86
ATF1P18846 AC091167.1-201ENST00000492017 396 ntBASIC3.43□□□□□ -1.86
ATF1P18846 AC092045.1-201ENST00000495716 1231 ntBASIC3.43□□□□□ -1.86
ATF1P18846 RPS27AP13-201ENST00000498403 237 ntBASIC3.43□□□□□ -1.86
ATF1P18846 RNU6-1308P-201ENST00000516817 103 ntBASIC3.43□□□□□ -1.86
ATF1P18846 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC3.43□□□□□ -1.86
ATF1P18846 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC3.43□□□□□ -1.86
ATF1P18846 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.43□□□□□ -1.86
ATF1P18846 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
ATF1P18846 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.43□□□□□ -1.86
ATF1P18846 AC090877.1-201ENST00000561418 344 ntBASIC3.43□□□□□ -1.86
ATF1P18846 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC3.43□□□□□ -1.86
ATF1P18846 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.43□□□□□ -1.86
ATF1P18846 MIR5096-201ENST00000583713 70 ntBASIC3.43□□□□□ -1.86
ATF1P18846 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
ATF1P18846 AC006116.5-201ENST00000591936 559 ntBASIC3.43□□□□□ -1.86
ATF1P18846 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.43□□□□□ -1.86
ATF1P18846 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
ATF1P18846 MIR8059-201ENST00000620427 81 ntBASIC3.43□□□□□ -1.86
ATF1P18846 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.43□□□□□ -1.86
ATF1P18846 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
ATF1P18846 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
ATF1P18846 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.42□□□□□ -1.86
ATF1P18846 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
ATF1P18846 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.42□□□□□ -1.86
ATF1P18846 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
ATF1P18846 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
ATF1P18846 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
ATF1P18846 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
ATF1P18846 RNU11-4P-201ENST00000391149 133 ntBASIC3.42□□□□□ -1.86
ATF1P18846 RNA5SP239-201ENST00000410218 129 ntBASIC3.42□□□□□ -1.86
ATF1P18846 RPL30P2-201ENST00000414021 291 ntBASIC3.42□□□□□ -1.86
ATF1P18846 AC108032.1-201ENST00000416706 207 ntBASIC3.42□□□□□ -1.86
ATF1P18846 RPS12P23-201ENST00000419579 400 ntBASIC3.42□□□□□ -1.86
ATF1P18846 AL592293.2-201ENST00000422292 996 ntBASIC3.42□□□□□ -1.86
ATF1P18846 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.42□□□□□ -1.86
ATF1P18846 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
ATF1P18846 BTG3P1-201ENST00000435859 716 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms