Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC5.52□□□□□ -1.53
COL6A2P12110 HMGB1P11-201ENST00000413899 637 ntBASIC5.52□□□□□ -1.53
COL6A2P12110 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC5.52□□□□□ -1.53
COL6A2P12110 AC007161.1-204ENST00000423039 460 ntBASIC5.52□□□□□ -1.53
COL6A2P12110 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC5.52□□□□□ -1.53
COL6A2P12110 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.52□□□□□ -1.53
COL6A2P12110 AC007679.3-201ENST00000434035 414 ntBASIC5.52□□□□□ -1.53
COL6A2P12110 AC244505.5-201ENST00000443639 207 ntBASIC5.52□□□□□ -1.53
COL6A2P12110 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC5.52□□□□□ -1.53
COL6A2P12110 AC002553.2-201ENST00000453217 340 ntBASIC5.52□□□□□ -1.53
COL6A2P12110 AL033528.1-201ENST00000453780 140 ntBASIC5.52□□□□□ -1.53
COL6A2P12110 AL133244.1-201ENST00000456007 258 ntBASIC5.52□□□□□ -1.53
COL6A2P12110 KLF3P2-201ENST00000465138 268 ntBASIC5.52□□□□□ -1.53
COL6A2P12110 MTND6P6-201ENST00000478031 263 ntBASIC5.52□□□□□ -1.53
COL6A2P12110 AP002884.1-201ENST00000479691 655 ntBASIC5.52□□□□□ -1.53
COL6A2P12110 UBA52P3-201ENST00000491303 382 ntBASIC5.52□□□□□ -1.53
COL6A2P12110 RPL9P6-201ENST00000492764 598 ntBASIC5.52□□□□□ -1.53
COL6A2P12110 MTCYBP17-201ENST00000503579 789 ntBASIC5.52□□□□□ -1.53
COL6A2P12110 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
COL6A2P12110 PDLIM1P4-201ENST00000504327 1006 ntBASIC5.52□□□□□ -1.53
COL6A2P12110 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.52□□□□□ -1.53
COL6A2P12110 RPS27AP18-201ENST00000515536 459 ntBASIC5.52□□□□□ -1.53
COL6A2P12110 PAICSP4-201ENST00000517543 1253 ntBASIC5.52□□□□□ -1.53
COL6A2P12110 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.52□□□□□ -1.53
COL6A2P12110 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.52□□□□□ -1.53
COL6A2P12110 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC5.52□□□□□ -1.53
COL6A2P12110 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.52□□□□□ -1.53
COL6A2P12110 HSPE1P2-201ENST00000554777 306 ntBASIC5.52□□□□□ -1.53
COL6A2P12110 BGLT3-201ENST00000564523 994 ntBASIC5.52□□□□□ -1.53
COL6A2P12110 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC5.52□□□□□ -1.53
COL6A2P12110 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC5.52□□□□□ -1.53
COL6A2P12110 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC5.52□□□□□ -1.53
COL6A2P12110 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.52□□□□□ -1.53
COL6A2P12110 AC079315.1-201ENST00000602952 623 ntBASIC5.52□□□□□ -1.53
COL6A2P12110 AC115286.1-201ENST00000604298 434 ntBASIC5.52□□□□□ -1.53
COL6A2P12110 AC090970.3-201ENST00000612566 866 ntBASIC5.52□□□□□ -1.53
COL6A2P12110 AC025253.1-201ENST00000613623 543 ntBASIC5.52□□□□□ -1.53
COL6A2P12110 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC5.52□□□□□ -1.53
COL6A2P12110 AC231657.1-201ENST00000624313 397 ntBASIC5.52□□□□□ -1.53
COL6A2P12110 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.52□□□□□ -1.53
COL6A2P12110 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
COL6A2P12110 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.52□□□□□ -1.53
COL6A2P12110 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
COL6A2P12110 AC090017.1-201ENST00000548612 1779 ntBASIC5.52□□□□□ -1.53
COL6A2P12110 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
COL6A2P12110 THAP12P5-201ENST00000405864 2275 ntBASIC5.51□□□□□ -1.53
COL6A2P12110 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.51□□□□□ -1.53
COL6A2P12110 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
COL6A2P12110 MTCO1P14-201ENST00000441695 1559 ntBASIC5.51□□□□□ -1.53
COL6A2P12110 AC104964.3-201ENST00000606115 2860 ntBASIC5.51□□□□□ -1.53
COL6A2P12110 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.51□□□□□ -1.53
COL6A2P12110 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL6A2P12110 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
COL6A2P12110 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL6A2P12110 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.51□□□□□ -1.53
COL6A2P12110 OR4G11P-202ENST00000642116 1414 ntBASIC5.51□□□□□ -1.53
COL6A2P12110 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
COL6A2P12110 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
COL6A2P12110 AC092376.2-201ENST00000622621 4116 ntBASIC5.51□□□□□ -1.53
COL6A2P12110 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
COL6A2P12110 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC5.51□□□□□ -1.53
COL6A2P12110 RNU1-150P-201ENST00000362491 162 ntBASIC5.51□□□□□ -1.53
COL6A2P12110 OR7E101P-201ENST00000400428 513 ntBASIC5.51□□□□□ -1.53
COL6A2P12110 AL139128.1-201ENST00000413921 941 ntBASIC5.51□□□□□ -1.53
COL6A2P12110 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC5.51□□□□□ -1.53
COL6A2P12110 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC5.51□□□□□ -1.53
COL6A2P12110 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC5.51□□□□□ -1.53
COL6A2P12110 AL158073.1-201ENST00000426848 1104 ntBASIC5.51□□□□□ -1.53
COL6A2P12110 MTCO2P19-201ENST00000427513 598 ntBASIC5.51□□□□□ -1.53
COL6A2P12110 VN1R54P-201ENST00000435210 1049 ntBASIC5.51□□□□□ -1.53
COL6A2P12110 RPL37P21-201ENST00000435890 276 ntBASIC5.51□□□□□ -1.53
COL6A2P12110 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.51□□□□□ -1.53
COL6A2P12110 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC5.51□□□□□ -1.53
COL6A2P12110 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC5.51□□□□□ -1.53
COL6A2P12110 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC5.51□□□□□ -1.53
COL6A2P12110 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.51□□□□□ -1.53
COL6A2P12110 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.51□□□□□ -1.53
COL6A2P12110 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC5.51□□□□□ -1.53
COL6A2P12110 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.51□□□□□ -1.53
COL6A2P12110 TRGVB-201ENST00000453257 471 ntBASIC5.51□□□□□ -1.53
COL6A2P12110 RPL37P3-201ENST00000456825 293 ntBASIC5.51□□□□□ -1.53
COL6A2P12110 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC5.51□□□□□ -1.53
COL6A2P12110 AC022215.1-201ENST00000481770 362 ntBASIC5.51□□□□□ -1.53
COL6A2P12110 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.51□□□□□ -1.53
COL6A2P12110 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC5.51□□□□□ -1.53
COL6A2P12110 NENFP3-201ENST00000503735 313 ntBASIC5.51□□□□□ -1.53
COL6A2P12110 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
COL6A2P12110 AC022483.1-201ENST00000514020 567 ntBASIC5.51□□□□□ -1.53
COL6A2P12110 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC5.51□□□□□ -1.53
COL6A2P12110 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.51□□□□□ -1.53
COL6A2P12110 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.51□□□□□ -1.53
COL6A2P12110 ARL2BPP5-201ENST00000523141 481 ntBASIC5.51□□□□□ -1.53
COL6A2P12110 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.51□□□□□ -1.53
COL6A2P12110 AP002748.2-201ENST00000528671 348 ntBASIC5.51□□□□□ -1.53
COL6A2P12110 TRIM51DP-201ENST00000529746 596 ntBASIC5.51□□□□□ -1.53
COL6A2P12110 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
COL6A2P12110 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.51□□□□□ -1.53
COL6A2P12110 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.51□□□□□ -1.53
COL6A2P12110 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.51□□□□□ -1.53
COL6A2P12110 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms