Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.92□□□□□ -1.62
HOXC6P09630 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC4.92□□□□□ -1.62
HOXC6P09630 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.92□□□□□ -1.62
HOXC6P09630 AC133963.2-201ENST00000513686 578 ntBASIC4.92□□□□□ -1.62
HOXC6P09630 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC4.92□□□□□ -1.62
HOXC6P09630 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC4.92□□□□□ -1.62
HOXC6P09630 OR10V3P-201ENST00000525712 725 ntBASIC4.92□□□□□ -1.62
HOXC6P09630 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
HOXC6P09630 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HOXC6P09630 CYB5AP5-201ENST00000549779 389 ntBASIC4.92□□□□□ -1.62
HOXC6P09630 OR4U1P-201ENST00000554958 912 ntBASIC4.92□□□□□ -1.62
HOXC6P09630 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC4.92□□□□□ -1.62
HOXC6P09630 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC4.92□□□□□ -1.62
HOXC6P09630 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC4.92□□□□□ -1.62
HOXC6P09630 AC113368.1-201ENST00000603736 382 ntBASIC4.92□□□□□ -1.62
HOXC6P09630 AL451086.1-201ENST00000605596 223 ntBASIC4.92□□□□□ -1.62
HOXC6P09630 COX6CP4-201ENST00000605798 228 ntBASIC4.92□□□□□ -1.62
HOXC6P09630 RNU4-89P-201ENST00000607443 133 ntBASIC4.92□□□□□ -1.62
HOXC6P09630 AL451049.1-201ENST00000608672 497 ntBASIC4.92□□□□□ -1.62
HOXC6P09630 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC4.92□□□□□ -1.62
HOXC6P09630 AC015871.5-202ENST00000623252 701 ntBASIC4.92□□□□□ -1.62
HOXC6P09630 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
HOXC6P09630 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.92□□□□□ -1.62
HOXC6P09630 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
HOXC6P09630 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
HOXC6P09630 AC245100.2-201ENST00000454544 1679 ntBASIC4.92□□□□□ -1.62
HOXC6P09630 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HOXC6P09630 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HOXC6P09630 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC4.92□□□□□ -1.62
HOXC6P09630 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HOXC6P09630 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
HOXC6P09630 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
HOXC6P09630 AL133268.1-201ENST00000405676 1401 ntBASIC4.91□□□□□ -1.62
HOXC6P09630 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.91□□□□□ -1.62
HOXC6P09630 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HOXC6P09630 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HOXC6P09630 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
HOXC6P09630 RAD1P1-201ENST00000231383 813 ntBASIC4.91□□□□□ -1.62
HOXC6P09630 RNU6-252P-201ENST00000363232 107 ntBASIC4.91□□□□□ -1.62
HOXC6P09630 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
HOXC6P09630 ENSAP1-201ENST00000392855 326 ntBASIC4.91□□□□□ -1.62
HOXC6P09630 RN7SKP182-201ENST00000410772 298 ntBASIC4.91□□□□□ -1.62
HOXC6P09630 CYCSP19-201ENST00000411715 316 ntBASIC4.91□□□□□ -1.62
HOXC6P09630 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.91□□□□□ -1.62
HOXC6P09630 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.91□□□□□ -1.62
HOXC6P09630 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.91□□□□□ -1.62
HOXC6P09630 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.91□□□□□ -1.62
HOXC6P09630 AC006946.1-201ENST00000429106 328 ntBASIC4.91□□□□□ -1.62
HOXC6P09630 AL356276.2-201ENST00000435919 558 ntBASIC4.91□□□□□ -1.62
HOXC6P09630 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC4.91□□□□□ -1.62
HOXC6P09630 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.91□□□□□ -1.62
HOXC6P09630 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.91□□□□□ -1.62
HOXC6P09630 Z83846.1-201ENST00000446798 265 ntBASIC4.91□□□□□ -1.62
HOXC6P09630 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC4.91□□□□□ -1.62
HOXC6P09630 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC4.91□□□□□ -1.62
HOXC6P09630 AC091959.2-201ENST00000477363 321 ntBASIC4.91□□□□□ -1.62
HOXC6P09630 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC4.91□□□□□ -1.62
HOXC6P09630 SUMO1P1-201ENST00000497904 306 ntBASIC4.91□□□□□ -1.62
HOXC6P09630 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC4.91□□□□□ -1.62
HOXC6P09630 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC4.91□□□□□ -1.62
HOXC6P09630 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
HOXC6P09630 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HOXC6P09630 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC4.91□□□□□ -1.62
HOXC6P09630 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.91□□□□□ -1.62
HOXC6P09630 MTND4LP31-201ENST00000514859 294 ntBASIC4.91□□□□□ -1.62
HOXC6P09630 RNA5SP519-201ENST00000516480 119 ntBASIC4.91□□□□□ -1.62
HOXC6P09630 AP000916.1-201ENST00000533869 835 ntBASIC4.91□□□□□ -1.62
HOXC6P09630 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.91□□□□□ -1.62
HOXC6P09630 DYNLL1P4-201ENST00000549314 266 ntBASIC4.91□□□□□ -1.62
HOXC6P09630 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC4.91□□□□□ -1.62
HOXC6P09630 AC010735.1-201ENST00000567305 1026 ntBASIC4.91□□□□□ -1.62
HOXC6P09630 RN7SL703P-201ENST00000578485 302 ntBASIC4.91□□□□□ -1.62
HOXC6P09630 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.91□□□□□ -1.62
HOXC6P09630 AC006272.2-201ENST00000594725 163 ntBASIC4.91□□□□□ -1.62
HOXC6P09630 AL354984.3-201ENST00000604803 325 ntBASIC4.91□□□□□ -1.62
HOXC6P09630 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
HOXC6P09630 MIR6075-201ENST00000620782 95 ntBASIC4.91□□□□□ -1.62
HOXC6P09630 AC138965.3-201ENST00000623875 498 ntBASIC4.91□□□□□ -1.62
HOXC6P09630 AC026422.1-201ENST00000623961 452 ntBASIC4.91□□□□□ -1.62
HOXC6P09630 AC010608.2-201ENST00000624830 470 ntBASIC4.91□□□□□ -1.62
HOXC6P09630 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.91□□□□□ -1.62
HOXC6P09630 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
HOXC6P09630 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HOXC6P09630 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HOXC6P09630 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.91□□□□□ -1.62
HOXC6P09630 NF1-214ENST00000490416 1329 ntTSL 3 BASIC4.91□□□□□ -1.62
HOXC6P09630 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HOXC6P09630 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HOXC6P09630 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC4.91□□□□□ -1.62
HOXC6P09630 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.9□□□□□ -1.62
HOXC6P09630 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
HOXC6P09630 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
HOXC6P09630 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
HOXC6P09630 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
HOXC6P09630 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.9□□□□□ -1.62
HOXC6P09630 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
HOXC6P09630 AC026523.2-201ENST00000625039 7739 ntBASIC4.9□□□□□ -1.62
HOXC6P09630 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
HOXC6P09630 RNA5SP175-201ENST00000364275 119 ntBASIC4.9□□□□□ -1.63
HOXC6P09630 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms