Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 RNFT1P2-201ENST00000443064 757 ntBASIC4.5□□□□□ -1.69
VTNP04004 AC044797.1-201ENST00000445744 679 ntBASIC4.5□□□□□ -1.69
VTNP04004 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.5□□□□□ -1.69
VTNP04004 RN7SL542P-201ENST00000467147 294 ntBASIC4.5□□□□□ -1.69
VTNP04004 AC007537.2-201ENST00000472093 511 ntBASIC4.5□□□□□ -1.69
VTNP04004 RPS4XP15-201ENST00000489210 795 ntBASIC4.5□□□□□ -1.69
VTNP04004 AC146944.2-203ENST00000502493 354 ntBASIC4.5□□□□□ -1.69
VTNP04004 AC139495.1-202ENST00000513164 354 ntBASIC4.5□□□□□ -1.69
VTNP04004 RNU6-1308P-201ENST00000516817 103 ntBASIC4.5□□□□□ -1.69
VTNP04004 snoU109.6-201ENST00000516831 118 ntBASIC4.5□□□□□ -1.69
VTNP04004 RNU1-45P-201ENST00000517191 141 ntBASIC4.5□□□□□ -1.69
VTNP04004 MTND5P21-201ENST00000531961 522 ntBASIC4.5□□□□□ -1.69
VTNP04004 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.5□□□□□ -1.69
VTNP04004 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC4.5□□□□□ -1.69
VTNP04004 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.5□□□□□ -1.69
VTNP04004 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.5□□□□□ -1.69
VTNP04004 AC023158.1-201ENST00000561632 1025 ntBASIC4.5□□□□□ -1.69
VTNP04004 RPL23AP87-202ENST00000573039 466 ntBASIC4.5□□□□□ -1.69
VTNP04004 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC4.5□□□□□ -1.69
VTNP04004 AC110743.1-201ENST00000584870 478 ntBASIC4.5□□□□□ -1.69
VTNP04004 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.5□□□□□ -1.69
VTNP04004 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.5□□□□□ -1.69
VTNP04004 AC018645.2-201ENST00000609151 472 ntBASIC4.5□□□□□ -1.69
VTNP04004 AC110792.4-201ENST00000609843 298 ntBASIC4.5□□□□□ -1.69
VTNP04004 MIR6868-201ENST00000611215 58 ntBASIC4.5□□□□□ -1.69
VTNP04004 AC090246.1-201ENST00000616499 426 ntBASIC4.5□□□□□ -1.69
VTNP04004 AC016957.2-201ENST00000616998 848 ntBASIC4.5□□□□□ -1.69
VTNP04004 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.5□□□□□ -1.69
VTNP04004 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
VTNP04004 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.5□□□□□ -1.69
VTNP04004 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
VTNP04004 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.5□□□□□ -1.69
VTNP04004 ERCC6-202ENST00000374127 1782 ntBASIC4.5□□□□□ -1.69
VTNP04004 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.5□□□□□ -1.69
VTNP04004 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.5□□□□□ -1.69
VTNP04004 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
VTNP04004 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
VTNP04004 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
VTNP04004 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.49□□□□□ -1.69
VTNP04004 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
VTNP04004 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
VTNP04004 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
VTNP04004 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.49□□□□□ -1.69
VTNP04004 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
VTNP04004 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
VTNP04004 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
VTNP04004 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4.49□□□□□ -1.69
VTNP04004 RNU6-925P-201ENST00000384629 104 ntBASIC4.49□□□□□ -1.69
VTNP04004 CYCSP19-201ENST00000411715 316 ntBASIC4.49□□□□□ -1.69
VTNP04004 TATDN1P1-201ENST00000414123 891 ntBASIC4.49□□□□□ -1.69
VTNP04004 RPS23P10-201ENST00000416185 486 ntBASIC4.49□□□□□ -1.69
VTNP04004 OR6C64P-201ENST00000419708 825 ntBASIC4.49□□□□□ -1.69
VTNP04004 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC4.49□□□□□ -1.69
VTNP04004 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.49□□□□□ -1.69
VTNP04004 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC4.49□□□□□ -1.69
VTNP04004 RPL23AP89-201ENST00000439324 255 ntBASIC4.49□□□□□ -1.69
VTNP04004 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC4.49□□□□□ -1.69
VTNP04004 AC092691.2-201ENST00000461787 803 ntBASIC4.49□□□□□ -1.69
VTNP04004 SYT14P1-201ENST00000481459 721 ntBASIC4.49□□□□□ -1.69
VTNP04004 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.49□□□□□ -1.69
VTNP04004 DEFB109F-201ENST00000491870 277 ntBASIC4.49□□□□□ -1.69
VTNP04004 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
VTNP04004 HIGD1AP18-201ENST00000520730 278 ntBASIC4.49□□□□□ -1.69
VTNP04004 MTCO1P49-201ENST00000523429 802 ntBASIC4.49□□□□□ -1.69
VTNP04004 AC100770.1-201ENST00000532310 322 ntBASIC4.49□□□□□ -1.69
VTNP04004 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.49□□□□□ -1.69
VTNP04004 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.49□□□□□ -1.69
VTNP04004 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.49□□□□□ -1.69
VTNP04004 AC025627.2-201ENST00000576220 160 ntBASIC4.49□□□□□ -1.69
VTNP04004 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.49□□□□□ -1.69
VTNP04004 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
VTNP04004 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.49□□□□□ -1.69
VTNP04004 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.49□□□□□ -1.69
VTNP04004 SUMO2P14-201ENST00000604488 293 ntBASIC4.49□□□□□ -1.69
VTNP04004 AC114878.2-201ENST00000604863 1251 ntBASIC4.49□□□□□ -1.69
VTNP04004 AC026741.1-201ENST00000605892 482 ntBASIC4.49□□□□□ -1.69
VTNP04004 AC099669.2-201ENST00000616549 437 ntBASIC4.49□□□□□ -1.69
VTNP04004 AL049777.1-201ENST00000622740 518 ntBASIC4.49□□□□□ -1.69
VTNP04004 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
VTNP04004 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
VTNP04004 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.49□□□□□ -1.69
VTNP04004 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
VTNP04004 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
VTNP04004 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
VTNP04004 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
VTNP04004 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.49□□□□□ -1.69
VTNP04004 AP001273.1-201ENST00000624493 3152 ntBASIC4.49□□□□□ -1.69
VTNP04004 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.48□□□□□ -1.69
VTNP04004 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.48□□□□□ -1.69
VTNP04004 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
VTNP04004 SAMMSON-213ENST00000641336 1521 ntBASIC4.48□□□□□ -1.69
VTNP04004 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
VTNP04004 AC016588.2-201ENST00000632484 3021 ntBASIC4.48□□□□□ -1.69
VTNP04004 SNORD35B-201ENST00000363660 87 ntBASIC4.48□□□□□ -1.69
VTNP04004 AL359837.1-201ENST00000381357 287 ntBASIC4.48□□□□□ -1.69
VTNP04004 VN1R8P-201ENST00000407739 893 ntBASIC4.48□□□□□ -1.69
VTNP04004 RNU4-27P-201ENST00000410889 139 ntBASIC4.48□□□□□ -1.69
VTNP04004 AC004448.2-201ENST00000422360 586 ntBASIC4.48□□□□□ -1.69
VTNP04004 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
VTNP04004 SKP1P3-201ENST00000429280 487 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms