Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.26□□□□□ -1.73
CLPTM1O96005 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.26□□□□□ -1.73
CLPTM1O96005 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.26□□□□□ -1.73
CLPTM1O96005 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.26□□□□□ -1.73
CLPTM1O96005 AC025946.2-201ENST00000603398 234 ntBASIC4.26□□□□□ -1.73
CLPTM1O96005 AC079610.2-201ENST00000604818 690 ntBASIC4.26□□□□□ -1.73
CLPTM1O96005 AL450336.1-201ENST00000605180 586 ntBASIC4.26□□□□□ -1.73
CLPTM1O96005 AL365400.2-201ENST00000605604 902 ntBASIC4.26□□□□□ -1.73
CLPTM1O96005 AC011374.2-201ENST00000607135 526 ntBASIC4.26□□□□□ -1.73
CLPTM1O96005 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.26□□□□□ -1.73
CLPTM1O96005 AC009159.2-201ENST00000617603 606 ntBASIC4.26□□□□□ -1.73
CLPTM1O96005 AL022401.1-201ENST00000619498 108 ntBASIC4.26□□□□□ -1.73
CLPTM1O96005 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
CLPTM1O96005 AL136964.1-201ENST00000622038 2990 ntBASIC4.26□□□□□ -1.73
CLPTM1O96005 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.26□□□□□ -1.73
CLPTM1O96005 AC112694.2-201ENST00000623697 768 ntBASIC4.26□□□□□ -1.73
CLPTM1O96005 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CLPTM1O96005 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC4.26□□□□□ -1.73
CLPTM1O96005 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.26□□□□□ -1.73
CLPTM1O96005 AC119674.1-212ENST00000641155 993 ntBASIC4.26□□□□□ -1.73
CLPTM1O96005 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CLPTM1O96005 MTCO1P18-201ENST00000455518 1419 ntBASIC4.26□□□□□ -1.73
CLPTM1O96005 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
CLPTM1O96005 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CLPTM1O96005 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CLPTM1O96005 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
CLPTM1O96005 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CLPTM1O96005 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.26□□□□□ -1.73
CLPTM1O96005 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CLPTM1O96005 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CLPTM1O96005 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CLPTM1O96005 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CLPTM1O96005 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.26□□□□□ -1.73
CLPTM1O96005 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLPTM1O96005 AC027287.1-201ENST00000553115 1453 ntBASIC4.25□□□□□ -1.73
CLPTM1O96005 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLPTM1O96005 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLPTM1O96005 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.25□□□□□ -1.73
CLPTM1O96005 ZNF962P-201ENST00000443465 3140 ntBASIC4.25□□□□□ -1.73
CLPTM1O96005 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CLPTM1O96005 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLPTM1O96005 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLPTM1O96005 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.25□□□□□ -1.73
CLPTM1O96005 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLPTM1O96005 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CLPTM1O96005 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CLPTM1O96005 MIR3074-201ENST00000384885 81 ntBASIC4.25□□□□□ -1.73
CLPTM1O96005 MIR550A3-201ENST00000390735 95 ntBASIC4.25□□□□□ -1.73
CLPTM1O96005 AL031119.1-201ENST00000404707 1879 ntBASIC4.25□□□□□ -1.73
CLPTM1O96005 SNORA11B-201ENST00000408175 129 ntBASIC4.25□□□□□ -1.73
CLPTM1O96005 RNA5SP306-201ENST00000411087 107 ntBASIC4.25□□□□□ -1.73
CLPTM1O96005 AL592310.1-201ENST00000414330 671 ntBASIC4.25□□□□□ -1.73
CLPTM1O96005 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.25□□□□□ -1.73
CLPTM1O96005 RPS23P10-201ENST00000416185 486 ntBASIC4.25□□□□□ -1.73
CLPTM1O96005 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.25□□□□□ -1.73
CLPTM1O96005 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC4.25□□□□□ -1.73
CLPTM1O96005 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLPTM1O96005 OR6K4P-201ENST00000423179 955 ntBASIC4.25□□□□□ -1.73
CLPTM1O96005 RPL7P11-201ENST00000437586 658 ntBASIC4.25□□□□□ -1.73
CLPTM1O96005 CACYBPP1-201ENST00000438592 684 ntBASIC4.25□□□□□ -1.73
CLPTM1O96005 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.25□□□□□ -1.73
CLPTM1O96005 YWHAZP2-201ENST00000440317 728 ntBASIC4.25□□□□□ -1.73
CLPTM1O96005 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.25□□□□□ -1.73
CLPTM1O96005 ELOCP13-201ENST00000443934 329 ntBASIC4.25□□□□□ -1.73
CLPTM1O96005 HMGB1P16-201ENST00000447155 540 ntBASIC4.25□□□□□ -1.73
CLPTM1O96005 GTF2IP12-201ENST00000456547 356 ntBASIC4.25□□□□□ -1.73
CLPTM1O96005 RPL35AP28-201ENST00000459730 331 ntBASIC4.25□□□□□ -1.73
CLPTM1O96005 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.25□□□□□ -1.73
CLPTM1O96005 AC068587.2-201ENST00000478386 781 ntBASIC4.25□□□□□ -1.73
CLPTM1O96005 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC4.25□□□□□ -1.73
CLPTM1O96005 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.25□□□□□ -1.73
CLPTM1O96005 AC113420.1-201ENST00000507903 571 ntBASIC4.25□□□□□ -1.73
CLPTM1O96005 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC4.25□□□□□ -1.73
CLPTM1O96005 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC4.25□□□□□ -1.73
CLPTM1O96005 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.25□□□□□ -1.73
CLPTM1O96005 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.25□□□□□ -1.73
CLPTM1O96005 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC4.25□□□□□ -1.73
CLPTM1O96005 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.25□□□□□ -1.73
CLPTM1O96005 OR10V3P-201ENST00000525712 725 ntBASIC4.25□□□□□ -1.73
CLPTM1O96005 AC021006.3-201ENST00000530771 192 ntBASIC4.25□□□□□ -1.73
CLPTM1O96005 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.25□□□□□ -1.73
CLPTM1O96005 AP006289.1-201ENST00000538089 277 ntBASIC4.25□□□□□ -1.73
CLPTM1O96005 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.25□□□□□ -1.73
CLPTM1O96005 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.25□□□□□ -1.73
CLPTM1O96005 AC011611.5-201ENST00000552477 578 ntBASIC4.25□□□□□ -1.73
CLPTM1O96005 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.25□□□□□ -1.73
CLPTM1O96005 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.25□□□□□ -1.73
CLPTM1O96005 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.25□□□□□ -1.73
CLPTM1O96005 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC4.25□□□□□ -1.73
CLPTM1O96005 AC020914.4-201ENST00000597690 277 ntBASIC4.25□□□□□ -1.73
CLPTM1O96005 PSMA6P4-201ENST00000603247 718 ntBASIC4.25□□□□□ -1.73
CLPTM1O96005 AL357094.1-201ENST00000603845 844 ntBASIC4.25□□□□□ -1.73
CLPTM1O96005 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.25□□□□□ -1.73
CLPTM1O96005 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.25□□□□□ -1.73
CLPTM1O96005 AL121932.1-201ENST00000605542 214 ntBASIC4.25□□□□□ -1.73
CLPTM1O96005 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.25□□□□□ -1.73
CLPTM1O96005 AC010424.2-201ENST00000607594 443 ntBASIC4.25□□□□□ -1.73
CLPTM1O96005 AP002360.3-201ENST00000607673 710 ntBASIC4.25□□□□□ -1.73
CLPTM1O96005 AC106052.1-201ENST00000608029 497 ntBASIC4.25□□□□□ -1.73
CLPTM1O96005 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 153.2 ms