Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
SNX3O60493 NPM1P4-201ENST00000414095 812 ntBASIC4.21□□□□□ -1.74
SNX3O60493 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SNX3O60493 TAF13P2-201ENST00000416876 286 ntBASIC4.21□□□□□ -1.74
SNX3O60493 RPL12P34-201ENST00000424532 479 ntBASIC4.21□□□□□ -1.74
SNX3O60493 ZNF736P7Y-201ENST00000425158 820 ntBASIC4.21□□□□□ -1.74
SNX3O60493 OR5AW1P-201ENST00000426334 1006 ntBASIC4.21□□□□□ -1.74
SNX3O60493 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.21□□□□□ -1.74
SNX3O60493 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC4.21□□□□□ -1.74
SNX3O60493 AC016831.4-201ENST00000438302 307 ntBASIC4.21□□□□□ -1.74
SNX3O60493 ACTR3P2-201ENST00000439585 1257 ntBASIC4.21□□□□□ -1.74
SNX3O60493 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.21□□□□□ -1.74
SNX3O60493 MYO5BP2-201ENST00000449815 1277 ntBASIC4.21□□□□□ -1.74
SNX3O60493 OR52J1P-201ENST00000450596 932 ntBASIC4.21□□□□□ -1.74
SNX3O60493 PPIAP21-201ENST00000464473 501 ntBASIC4.21□□□□□ -1.74
SNX3O60493 RPL35AP15-201ENST00000468042 339 ntBASIC4.21□□□□□ -1.74
SNX3O60493 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
SNX3O60493 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.21□□□□□ -1.74
SNX3O60493 RPL7P51-201ENST00000490532 749 ntBASIC4.21□□□□□ -1.74
SNX3O60493 PRELID3BP6-201ENST00000503839 571 ntBASIC4.21□□□□□ -1.74
SNX3O60493 ATP1B1P1-201ENST00000509767 915 ntBASIC4.21□□□□□ -1.74
SNX3O60493 RN7SKP147-201ENST00000517154 244 ntBASIC4.21□□□□□ -1.74
SNX3O60493 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.21□□□□□ -1.74
SNX3O60493 SMARCE1P4-201ENST00000523647 241 ntBASIC4.21□□□□□ -1.74
SNX3O60493 AP001880.2-201ENST00000538233 448 ntBASIC4.21□□□□□ -1.74
SNX3O60493 ZKSCAN7P1-201ENST00000543668 673 ntBASIC4.21□□□□□ -1.74
SNX3O60493 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.21□□□□□ -1.74
SNX3O60493 AC090312.2-201ENST00000582687 378 ntBASIC4.21□□□□□ -1.74
SNX3O60493 AC090330.1-201ENST00000588646 764 ntBASIC4.21□□□□□ -1.74
SNX3O60493 AC006116.3-201ENST00000592968 361 ntBASIC4.21□□□□□ -1.74
SNX3O60493 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
SNX3O60493 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.21□□□□□ -1.74
SNX3O60493 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.21□□□□□ -1.74
SNX3O60493 AC093673.2-201ENST00000609674 331 ntBASIC4.21□□□□□ -1.74
SNX3O60493 AC078899.5-201ENST00000612475 178 ntBASIC4.21□□□□□ -1.74
SNX3O60493 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.21□□□□□ -1.74
SNX3O60493 AC112694.2-201ENST00000623697 768 ntBASIC4.21□□□□□ -1.74
SNX3O60493 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.21□□□□□ -1.74
SNX3O60493 MTCO1P6-201ENST00000481192 1384 ntBASIC4.21□□□□□ -1.74
SNX3O60493 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SNX3O60493 AC134882.1-201ENST00000603738 1676 ntBASIC4.21□□□□□ -1.74
SNX3O60493 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.74
SNX3O60493 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SNX3O60493 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SNX3O60493 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SNX3O60493 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.74
SNX3O60493 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
SNX3O60493 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SNX3O60493 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.2□□□□□ -1.74
SNX3O60493 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SNX3O60493 BRAFP1-201ENST00000445336 2703 ntBASIC4.2□□□□□ -1.74
SNX3O60493 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SNX3O60493 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SNX3O60493 RNU6-146P-201ENST00000384602 108 ntBASIC4.2□□□□□ -1.74
SNX3O60493 MIR659-201ENST00000384963 97 ntBASIC4.2□□□□□ -1.74
SNX3O60493 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
SNX3O60493 RPL31P52-201ENST00000407532 367 ntBASIC4.2□□□□□ -1.74
SNX3O60493 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.2□□□□□ -1.74
SNX3O60493 RPL12P28-201ENST00000430852 489 ntBASIC4.2□□□□□ -1.74
SNX3O60493 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.2□□□□□ -1.74
SNX3O60493 RPL12P46-201ENST00000436610 195 ntBASIC4.2□□□□□ -1.74
SNX3O60493 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.2□□□□□ -1.74
SNX3O60493 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.2□□□□□ -1.74
SNX3O60493 OR1H1P-201ENST00000448731 937 ntBASIC4.2□□□□□ -1.74
SNX3O60493 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC4.2□□□□□ -1.74
SNX3O60493 SETP20-201ENST00000457046 852 ntBASIC4.2□□□□□ -1.74
SNX3O60493 RN7SL172P-201ENST00000460535 303 ntBASIC4.2□□□□□ -1.74
SNX3O60493 AC079841.1-201ENST00000481228 950 ntBASIC4.2□□□□□ -1.74
SNX3O60493 AC073522.1-201ENST00000483312 377 ntBASIC4.2□□□□□ -1.74
SNX3O60493 BTF3L4P4-201ENST00000506381 449 ntBASIC4.2□□□□□ -1.74
SNX3O60493 HPRT1P1-201ENST00000509498 657 ntBASIC4.2□□□□□ -1.74
SNX3O60493 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.2□□□□□ -1.74
SNX3O60493 BTF3P13-201ENST00000513224 490 ntBASIC4.2□□□□□ -1.74
SNX3O60493 SNORA19.3-201ENST00000516165 130 ntBASIC4.2□□□□□ -1.74
SNX3O60493 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.2□□□□□ -1.74
SNX3O60493 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.2□□□□□ -1.74
SNX3O60493 AC010376.1-201ENST00000522101 334 ntBASIC4.2□□□□□ -1.74
SNX3O60493 MTND1P6-201ENST00000523621 946 ntBASIC4.2□□□□□ -1.74
SNX3O60493 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.2□□□□□ -1.74
SNX3O60493 AC063949.1-201ENST00000552900 865 ntBASIC4.2□□□□□ -1.74
SNX3O60493 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.2□□□□□ -1.74
SNX3O60493 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC4.2□□□□□ -1.74
SNX3O60493 ZNF971P-201ENST00000562068 1249 ntBASIC4.2□□□□□ -1.74
SNX3O60493 CYP2C60P-201ENST00000566088 139 ntBASIC4.2□□□□□ -1.74
SNX3O60493 MTCO1P40-201ENST00000574371 625 ntBASIC4.2□□□□□ -1.74
SNX3O60493 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.2□□□□□ -1.74
SNX3O60493 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.2□□□□□ -1.74
SNX3O60493 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.2□□□□□ -1.74
SNX3O60493 AL022067.1-201ENST00000602426 454 ntBASIC4.2□□□□□ -1.74
SNX3O60493 AC069431.2-201ENST00000604149 1099 ntBASIC4.2□□□□□ -1.74
SNX3O60493 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SNX3O60493 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC4.2□□□□□ -1.74
SNX3O60493 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC4.2□□□□□ -1.74
SNX3O60493 AC099654.9-201ENST00000637055 678 ntBASIC4.2□□□□□ -1.74
SNX3O60493 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.2□□□□□ -1.74
SNX3O60493 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.2□□□□□ -1.74
SNX3O60493 BX649567.1-201ENST00000642071 1134 ntBASIC4.2□□□□□ -1.74
SNX3O60493 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SNX3O60493 AC022031.1-201ENST00000585985 2593 ntBASIC4.2□□□□□ -1.74
SNX3O60493 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms