Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 RPS23P1-201ENST00000491662 432 ntBASIC5.54□□□□□ -1.52
PRPF3O43395 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.54□□□□□ -1.52
PRPF3O43395 WBP1LP4-201ENST00000505043 344 ntBASIC5.54□□□□□ -1.52
PRPF3O43395 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC5.54□□□□□ -1.52
PRPF3O43395 AC005351.1-201ENST00000511152 786 ntBASIC5.54□□□□□ -1.52
PRPF3O43395 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC5.54□□□□□ -1.52
PRPF3O43395 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC5.54□□□□□ -1.52
PRPF3O43395 BRD9P1-201ENST00000529855 560 ntBASIC5.54□□□□□ -1.52
PRPF3O43395 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC5.54□□□□□ -1.52
PRPF3O43395 BNIP3P1-201ENST00000547295 580 ntBASIC5.54□□□□□ -1.52
PRPF3O43395 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.54□□□□□ -1.52
PRPF3O43395 AC002400.1-201ENST00000569310 726 ntBASIC5.54□□□□□ -1.52
PRPF3O43395 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC5.54□□□□□ -1.52
PRPF3O43395 AL354943.1-201ENST00000572103 781 ntBASIC5.54□□□□□ -1.52
PRPF3O43395 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5.54□□□□□ -1.52
PRPF3O43395 MIR3934-201ENST00000579806 107 ntBASIC5.54□□□□□ -1.52
PRPF3O43395 MIR4737-201ENST00000583979 81 ntBASIC5.54□□□□□ -1.52
PRPF3O43395 AL031320.1-201ENST00000604177 357 ntBASIC5.54□□□□□ -1.52
PRPF3O43395 AL354760.1-201ENST00000608357 643 ntBASIC5.54□□□□□ -1.52
PRPF3O43395 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.54□□□□□ -1.52
PRPF3O43395 AC004908.3-201ENST00000610248 625 ntBASIC5.54□□□□□ -1.52
PRPF3O43395 AC107075.1-201ENST00000613695 314 ntBASIC5.54□□□□□ -1.52
PRPF3O43395 AC121761.2-201ENST00000617300 689 ntBASIC5.54□□□□□ -1.52
PRPF3O43395 MIR6864-201ENST00000617935 70 ntBASIC5.54□□□□□ -1.52
PRPF3O43395 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
PRPF3O43395 AC008079.2-201ENST00000623543 20396 ntBASIC5.54□□□□□ -1.52
PRPF3O43395 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PRPF3O43395 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.54□□□□□ -1.52
PRPF3O43395 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
PRPF3O43395 SOCS5P3-201ENST00000425115 1576 ntBASIC5.54□□□□□ -1.52
PRPF3O43395 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC5.54□□□□□ -1.52
PRPF3O43395 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PRPF3O43395 AC011978.2-201ENST00000569835 2054 ntBASIC5.54□□□□□ -1.52
PRPF3O43395 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PRPF3O43395 ZFRP1-201ENST00000457579 2970 ntBASIC5.53□□□□□ -1.52
PRPF3O43395 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.53□□□□□ -1.52
PRPF3O43395 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PRPF3O43395 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PRPF3O43395 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.53□□□□□ -1.52
PRPF3O43395 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
PRPF3O43395 SNORD116-23-201ENST00000384645 92 ntBASIC5.53□□□□□ -1.52
PRPF3O43395 RNY3P9-201ENST00000384727 106 ntBASIC5.53□□□□□ -1.52
PRPF3O43395 MIR550A3-201ENST00000390735 95 ntBASIC5.53□□□□□ -1.52
PRPF3O43395 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC5.53□□□□□ -1.52
PRPF3O43395 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.53□□□□□ -1.52
PRPF3O43395 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC5.53□□□□□ -1.52
PRPF3O43395 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.53□□□□□ -1.52
PRPF3O43395 PRELID3BP11-201ENST00000414230 479 ntBASIC5.53□□□□□ -1.52
PRPF3O43395 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.53□□□□□ -1.52
PRPF3O43395 AL590609.2-201ENST00000421430 368 ntBASIC5.53□□□□□ -1.52
PRPF3O43395 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.53□□□□□ -1.52
PRPF3O43395 AC104837.2-201ENST00000427236 424 ntBASIC5.53□□□□□ -1.52
PRPF3O43395 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC5.53□□□□□ -1.52
PRPF3O43395 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.53□□□□□ -1.52
PRPF3O43395 NRBF2P3-201ENST00000432731 865 ntBASIC5.53□□□□□ -1.52
PRPF3O43395 RPS20P1-201ENST00000434853 354 ntBASIC5.53□□□□□ -1.52
PRPF3O43395 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.53□□□□□ -1.52
PRPF3O43395 RPL7L1P1-201ENST00000448259 785 ntBASIC5.53□□□□□ -1.52
PRPF3O43395 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC5.53□□□□□ -1.52
PRPF3O43395 AC020890.1-201ENST00000491837 504 ntBASIC5.53□□□□□ -1.52
PRPF3O43395 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC5.53□□□□□ -1.52
PRPF3O43395 FTH1P24-201ENST00000503502 462 ntBASIC5.53□□□□□ -1.52
PRPF3O43395 AC091868.1-201ENST00000508746 304 ntBASIC5.53□□□□□ -1.52
PRPF3O43395 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.53□□□□□ -1.52
PRPF3O43395 NDUFB4P12-201ENST00000513465 390 ntBASIC5.53□□□□□ -1.52
PRPF3O43395 RNU6-1225P-201ENST00000516336 65 ntBASIC5.53□□□□□ -1.52
PRPF3O43395 AC022790.1-201ENST00000522872 204 ntBASIC5.53□□□□□ -1.52
PRPF3O43395 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
PRPF3O43395 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC5.53□□□□□ -1.52
PRPF3O43395 AP001880.2-201ENST00000538233 448 ntBASIC5.53□□□□□ -1.52
PRPF3O43395 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC5.53□□□□□ -1.52
PRPF3O43395 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC5.53□□□□□ -1.52
PRPF3O43395 GTF2IP8-201ENST00000560687 584 ntBASIC5.53□□□□□ -1.52
PRPF3O43395 MIR4436B2-201ENST00000581415 91 ntBASIC5.53□□□□□ -1.52
PRPF3O43395 AC233702.9-201ENST00000581528 203 ntBASIC5.53□□□□□ -1.52
PRPF3O43395 MIR4436B1-201ENST00000583272 91 ntBASIC5.53□□□□□ -1.52
PRPF3O43395 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC5.53□□□□□ -1.52
PRPF3O43395 AC093765.1-201ENST00000603758 881 ntBASIC5.53□□□□□ -1.52
PRPF3O43395 AC025811.1-201ENST00000604312 472 ntBASIC5.53□□□□□ -1.52
PRPF3O43395 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.53□□□□□ -1.52
PRPF3O43395 AC005332.6-201ENST00000613178 446 ntBASIC5.53□□□□□ -1.52
PRPF3O43395 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PRPF3O43395 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.53□□□□□ -1.52
PRPF3O43395 AC022893.2-201ENST00000564832 3296 ntBASIC5.53□□□□□ -1.52
PRPF3O43395 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.53□□□□□ -1.52
PRPF3O43395 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PRPF3O43395 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.53□□□□□ -1.52
PRPF3O43395 AC120338.1-201ENST00000625074 1541 ntBASIC5.53□□□□□ -1.52
PRPF3O43395 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PRPF3O43395 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.52□□□□□ -1.53
PRPF3O43395 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PRPF3O43395 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
PRPF3O43395 AL731566.1-201ENST00000620490 1937 ntBASIC5.52□□□□□ -1.53
PRPF3O43395 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.52□□□□□ -1.53
PRPF3O43395 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
PRPF3O43395 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PRPF3O43395 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PRPF3O43395 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.52□□□□□ -1.53
PRPF3O43395 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
PRPF3O43395 RNU6-582P-201ENST00000362989 107 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 141.9 ms