Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 AL031733.1-201ENST00000422817 455 ntBASIC10.89□□□□□ -0.67
MSH5O43196 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
MSH5O43196 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC10.89□□□□□ -0.67
MSH5O43196 AC004938.1-201ENST00000438468 308 ntBASIC10.89□□□□□ -0.67
MSH5O43196 CYP4F25P-201ENST00000446871 520 ntBASIC10.89□□□□□ -0.67
MSH5O43196 HMGN3P1-201ENST00000453847 193 ntBASIC10.89□□□□□ -0.67
MSH5O43196 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
MSH5O43196 HMGB1P21-201ENST00000502313 581 ntBASIC10.89□□□□□ -0.67
MSH5O43196 AC244034.2-201ENST00000562504 509 ntBASIC10.89□□□□□ -0.67
MSH5O43196 MIR4685-201ENST00000578185 69 ntBASIC10.89□□□□□ -0.67
MSH5O43196 TBC1D29-201ENST00000579181 652 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
MSH5O43196 AC005614.2-201ENST00000595508 461 ntTSL 5 BASIC10.89□□□□□ -0.67
MSH5O43196 KLKP1-201ENST00000595979 403 ntBASIC10.89□□□□□ -0.67
MSH5O43196 RPL23AP78-201ENST00000599928 470 ntBASIC10.89□□□□□ -0.67
MSH5O43196 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC10.89□□□□□ -0.67
MSH5O43196 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC10.89□□□□□ -0.67
MSH5O43196 AC069234.4-201ENST00000621276 412 ntBASIC10.89□□□□□ -0.67
MSH5O43196 ENSA-215ENST00000638926 360 ntTSL 5 BASIC10.89□□□□□ -0.67
MSH5O43196 AC131392.2-201ENST00000505635 4332 ntBASIC10.89□□□□□ -0.67
MSH5O43196 MAPK10-392ENST00000642103 3126 ntAPPRIS P2 BASIC10.89□□□□□ -0.67
MSH5O43196 TBX5-AS1-201ENST00000528549 3620 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
MSH5O43196 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
MSH5O43196 FLJ42393-201ENST00000623801 2270 ntBASIC10.89□□□□□ -0.67
MSH5O43196 HIST1H2BN-203ENST00000606613 4137 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
MSH5O43196 ZNF844-201ENST00000439326 6620 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
MSH5O43196 ZBTB40-204ENST00000404138 8992 ntAPPRIS P3 TSL 5 BASIC10.89□□□□□ -0.67
MSH5O43196 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
MSH5O43196 NQO1-203ENST00000379047 2527 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
MSH5O43196 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
MSH5O43196 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
MSH5O43196 GPR161-201ENST00000271357 7806 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
MSH5O43196 OR5H1-202ENST00000641874 5999 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
MSH5O43196 TNFSF15-201ENST00000374044 2789 ntBASIC10.88□□□□□ -0.67
MSH5O43196 PRKCQ-204ENST00000610727 3077 ntTSL 5 BASIC10.88□□□□□ -0.67
MSH5O43196 ZNF568-215ENST00000617745 2441 ntTSL 5 BASIC10.88□□□□□ -0.67
MSH5O43196 NLRP3-202ENST00000348069 3828 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
MSH5O43196 AFG1L-201ENST00000368977 5208 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
MSH5O43196 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
MSH5O43196 FXR1-203ENST00000445140 2651 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
MSH5O43196 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
MSH5O43196 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
MSH5O43196 RNU6-444P-201ENST00000383988 108 ntBASIC10.88□□□□□ -0.67
MSH5O43196 IGLV11-55-201ENST00000390286 381 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
MSH5O43196 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC10.88□□□□□ -0.67
MSH5O43196 AC099677.3-201ENST00000427081 395 ntBASIC10.88□□□□□ -0.67
MSH5O43196 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
MSH5O43196 RN7SL370P-201ENST00000470869 295 ntBASIC10.88□□□□□ -0.67
MSH5O43196 AC009022.1-201ENST00000472115 496 ntBASIC10.88□□□□□ -0.67
MSH5O43196 AL121594.1-201ENST00000475906 575 ntBASIC10.88□□□□□ -0.67
MSH5O43196 RN7SL432P-201ENST00000484057 298 ntBASIC10.88□□□□□ -0.67
MSH5O43196 AL139099.1-201ENST00000497398 403 ntBASIC10.88□□□□□ -0.67
MSH5O43196 AC107884.1-207ENST00000504206 4433 ntTSL 3 BASIC10.88□□□□□ -0.67
MSH5O43196 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC10.88□□□□□ -0.67
MSH5O43196 LINC00681-201ENST00000530150 504 ntTSL 2 BASIC10.88□□□□□ -0.67
MSH5O43196 ELP3-219ENST00000537665 3053 ntTSL 2 BASIC10.88□□□□□ -0.67
MSH5O43196 MIR5705-201ENST00000579870 89 ntBASIC10.88□□□□□ -0.67
MSH5O43196 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
MSH5O43196 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
MSH5O43196 AC116667.2-201ENST00000641075 823 ntBASIC10.88□□□□□ -0.67
MSH5O43196 ATXN7L1-202ENST00000419735 5417 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
MSH5O43196 SORBS1-204ENST00000361941 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
MSH5O43196 MCM8-205ENST00000610722 7486 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
MSH5O43196 NUP93-210ENST00000564887 2875 ntTSL 2 BASIC10.88□□□□□ -0.67
MSH5O43196 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC10.88□□□□□ -0.67
MSH5O43196 AC018992.1-201ENST00000523778 2149 ntBASIC10.88□□□□□ -0.67
MSH5O43196 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
MSH5O43196 UPP2-201ENST00000005756 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
MSH5O43196 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
MSH5O43196 NBPF19-204ENST00000611931 2051 ntTSL 5 BASIC10.88□□□□□ -0.67
MSH5O43196 NBPF26-205ENST00000615219 2051 ntTSL 5 BASIC10.88□□□□□ -0.67
MSH5O43196 NBPF12-207ENST00000617864 2051 ntTSL 5 BASIC10.88□□□□□ -0.67
MSH5O43196 NBPF20-204ENST00000620821 2051 ntTSL 5 BASIC10.88□□□□□ -0.67
MSH5O43196 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
MSH5O43196 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
MSH5O43196 CD86-201ENST00000264468 2634 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
MSH5O43196 ZNF471-202ENST00000591537 5859 ntTSL 2 BASIC10.87□□□□□ -0.67
MSH5O43196 ZNF415-213ENST00000597503 2469 ntTSL 2 BASIC10.87□□□□□ -0.67
MSH5O43196 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
MSH5O43196 BFAR-201ENST00000261658 3039 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
MSH5O43196 SELP-201ENST00000263686 3142 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
MSH5O43196 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC10.87□□□□□ -0.67
MSH5O43196 MSN-201ENST00000360270 3944 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
MSH5O43196 NXPE3-207ENST00000616286 1832 ntTSL 5 BASIC10.87□□□□□ -0.67
MSH5O43196 KIF4B-201ENST00000435029 4378 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
MSH5O43196 Y_RNA.251-201ENST00000364551 99 ntBASIC10.87□□□□□ -0.67
MSH5O43196 Y_RNA.570-201ENST00000384750 101 ntBASIC10.87□□□□□ -0.67
MSH5O43196 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC10.87□□□□□ -0.67
MSH5O43196 AL513043.1-201ENST00000439124 535 ntBASIC10.87□□□□□ -0.67
MSH5O43196 AL714022.1-201ENST00000439897 151 ntBASIC10.87□□□□□ -0.67
MSH5O43196 RPL26P6-201ENST00000440913 438 ntBASIC10.87□□□□□ -0.67
MSH5O43196 AC112187.1-201ENST00000455837 479 ntBASIC10.87□□□□□ -0.67
MSH5O43196 PAX8-AS1-208ENST00000456685 1207 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
MSH5O43196 AL035660.2-201ENST00000461248 556 ntTSL 2 BASIC10.87□□□□□ -0.67
MSH5O43196 AC117440.1-201ENST00000474107 571 ntBASIC10.87□□□□□ -0.67
MSH5O43196 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC10.87□□□□□ -0.67
MSH5O43196 GZMB-205ENST00000526004 819 ntTSL 3 BASIC10.87□□□□□ -0.67
MSH5O43196 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC10.87□□□□□ -0.67
MSH5O43196 MIR4793-201ENST00000577502 87 ntBASIC10.87□□□□□ -0.67
MSH5O43196 RN7SL25P-201ENST00000583862 260 ntBASIC10.87□□□□□ -0.67
MSH5O43196 AC099654.15-201ENST00000639802 509 ntBASIC10.87□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 131.5 ms