Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 TPT1P12-201ENST00000448968 492 ntBASIC3.66□□□□□ -1.82
UPK1AO00322 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC3.66□□□□□ -1.82
UPK1AO00322 MTCO3P20-201ENST00000454926 688 ntBASIC3.66□□□□□ -1.82
UPK1AO00322 AC099560.2-201ENST00000457554 255 ntBASIC3.66□□□□□ -1.82
UPK1AO00322 AC021205.1-201ENST00000468797 348 ntBASIC3.66□□□□□ -1.82
UPK1AO00322 AC110792.1-201ENST00000491826 472 ntBASIC3.66□□□□□ -1.82
UPK1AO00322 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC3.66□□□□□ -1.82
UPK1AO00322 NDUFA5P2-201ENST00000519723 344 ntBASIC3.66□□□□□ -1.82
UPK1AO00322 AC092851.1-201ENST00000535964 478 ntBASIC3.66□□□□□ -1.82
UPK1AO00322 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.66□□□□□ -1.82
UPK1AO00322 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.66□□□□□ -1.82
UPK1AO00322 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.66□□□□□ -1.82
UPK1AO00322 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.66□□□□□ -1.82
UPK1AO00322 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.66□□□□□ -1.82
UPK1AO00322 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.66□□□□□ -1.82
UPK1AO00322 MIR4644-201ENST00000579929 84 ntBASIC3.66□□□□□ -1.82
UPK1AO00322 AL133247.2-201ENST00000603236 482 ntBASIC3.66□□□□□ -1.82
UPK1AO00322 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.66□□□□□ -1.82
UPK1AO00322 AC084373.1-201ENST00000603311 235 ntBASIC3.66□□□□□ -1.82
UPK1AO00322 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
UPK1AO00322 AL645927.2-201ENST00000618350 349 ntBASIC3.66□□□□□ -1.82
UPK1AO00322 AL133370.2-201ENST00000619934 439 ntBASIC3.66□□□□□ -1.82
UPK1AO00322 U7.8-201ENST00000619968 63 ntBASIC3.66□□□□□ -1.82
UPK1AO00322 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC3.66□□□□□ -1.82
UPK1AO00322 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC3.66□□□□□ -1.82
UPK1AO00322 ATE1-AS1-202ENST00000636460 506 ntBASIC3.66□□□□□ -1.82
UPK1AO00322 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.66□□□□□ -1.82
UPK1AO00322 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
UPK1AO00322 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
UPK1AO00322 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
UPK1AO00322 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
UPK1AO00322 AC006504.1-201ENST00000562493 3666 ntBASIC3.66□□□□□ -1.82
UPK1AO00322 RMST-202ENST00000541282 2099 ntTSL 2 BASIC3.66□□□□□ -1.82
UPK1AO00322 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
UPK1AO00322 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
UPK1AO00322 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
UPK1AO00322 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
UPK1AO00322 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.65□□□□□ -1.82
UPK1AO00322 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
UPK1AO00322 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
UPK1AO00322 RNU1-13P-201ENST00000384499 162 ntBASIC3.65□□□□□ -1.83
UPK1AO00322 AC093719.1-202ENST00000392735 373 ntBASIC3.65□□□□□ -1.83
UPK1AO00322 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
UPK1AO00322 AL034374.1-201ENST00000406329 351 ntBASIC3.65□□□□□ -1.83
UPK1AO00322 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC3.65□□□□□ -1.83
UPK1AO00322 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.65□□□□□ -1.83
UPK1AO00322 AC093716.1-201ENST00000435923 377 ntBASIC3.65□□□□□ -1.83
UPK1AO00322 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.65□□□□□ -1.83
UPK1AO00322 TRBV12-2-201ENST00000489763 344 ntBASIC3.65□□□□□ -1.83
UPK1AO00322 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.65□□□□□ -1.83
UPK1AO00322 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC3.65□□□□□ -1.83
UPK1AO00322 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.65□□□□□ -1.83
UPK1AO00322 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.65□□□□□ -1.83
UPK1AO00322 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.65□□□□□ -1.83
UPK1AO00322 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.65□□□□□ -1.83
UPK1AO00322 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.65□□□□□ -1.83
UPK1AO00322 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.65□□□□□ -1.83
UPK1AO00322 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.65□□□□□ -1.83
UPK1AO00322 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC3.65□□□□□ -1.83
UPK1AO00322 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.65□□□□□ -1.83
UPK1AO00322 AC006946.3-201ENST00000609791 756 ntBASIC3.65□□□□□ -1.83
UPK1AO00322 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC3.65□□□□□ -1.83
UPK1AO00322 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC3.65□□□□□ -1.83
UPK1AO00322 AC091905.1-201ENST00000624400 311 ntBASIC3.65□□□□□ -1.83
UPK1AO00322 PNPT1P2-201ENST00000456768 2050 ntBASIC3.65□□□□□ -1.83
UPK1AO00322 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.65□□□□□ -1.83
UPK1AO00322 AC090971.4-201ENST00000560291 1800 ntBASIC3.65□□□□□ -1.83
UPK1AO00322 AC007342.7-201ENST00000624610 2337 ntBASIC3.65□□□□□ -1.83
UPK1AO00322 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
UPK1AO00322 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.65□□□□□ -1.83
UPK1AO00322 AC093311.1-201ENST00000506586 2021 ntBASIC3.65□□□□□ -1.83
UPK1AO00322 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.65□□□□□ -1.83
UPK1AO00322 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
UPK1AO00322 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
UPK1AO00322 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC3.64□□□□□ -1.83
UPK1AO00322 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
UPK1AO00322 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
UPK1AO00322 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.64□□□□□ -1.83
UPK1AO00322 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
UPK1AO00322 RNU6-386P-201ENST00000362650 107 ntBASIC3.64□□□□□ -1.83
UPK1AO00322 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.64□□□□□ -1.83
UPK1AO00322 RNA5SP443-201ENST00000363083 132 ntBASIC3.64□□□□□ -1.83
UPK1AO00322 SNORA70.2-201ENST00000364506 135 ntBASIC3.64□□□□□ -1.83
UPK1AO00322 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
UPK1AO00322 SNORD65-201ENST00000391079 73 ntBASIC3.64□□□□□ -1.83
UPK1AO00322 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
UPK1AO00322 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
UPK1AO00322 AC127526.1-201ENST00000417526 366 ntBASIC3.64□□□□□ -1.83
UPK1AO00322 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.64□□□□□ -1.83
UPK1AO00322 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.64□□□□□ -1.83
UPK1AO00322 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.64□□□□□ -1.83
UPK1AO00322 OR4C10P-201ENST00000434991 931 ntBASIC3.64□□□□□ -1.83
UPK1AO00322 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.64□□□□□ -1.83
UPK1AO00322 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.64□□□□□ -1.83
UPK1AO00322 CACYBPP1-201ENST00000438592 684 ntBASIC3.64□□□□□ -1.83
UPK1AO00322 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.64□□□□□ -1.83
UPK1AO00322 AC006326.1-201ENST00000445465 787 ntBASIC3.64□□□□□ -1.83
UPK1AO00322 BUD31P2-201ENST00000449374 300 ntBASIC3.64□□□□□ -1.83
UPK1AO00322 CCRL1P1-201ENST00000449542 1053 ntBASIC3.64□□□□□ -1.83
UPK1AO00322 RPL31P20-201ENST00000449593 360 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms