Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
TRIM49D1C9J1S8 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.86□□□□□ -1.79
TRIM49D1C9J1S8 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
TRIM49D1C9J1S8 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.86□□□□□ -1.79
TRIM49D1C9J1S8 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.86□□□□□ -1.79
TRIM49D1C9J1S8 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.86□□□□□ -1.79
TRIM49D1C9J1S8 RPL18P10-201ENST00000425606 538 ntBASIC3.86□□□□□ -1.79
TRIM49D1C9J1S8 RPS26P47-201ENST00000427219 348 ntBASIC3.86□□□□□ -1.79
TRIM49D1C9J1S8 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
TRIM49D1C9J1S8 CYCSP53-201ENST00000455540 265 ntBASIC3.86□□□□□ -1.79
TRIM49D1C9J1S8 AC084198.1-201ENST00000477747 402 ntBASIC3.86□□□□□ -1.79
TRIM49D1C9J1S8 AC105137.1-201ENST00000484355 562 ntBASIC3.86□□□□□ -1.79
TRIM49D1C9J1S8 COL6A4P2-205ENST00000509855 506 ntBASIC3.86□□□□□ -1.79
TRIM49D1C9J1S8 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.86□□□□□ -1.79
TRIM49D1C9J1S8 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.86□□□□□ -1.79
TRIM49D1C9J1S8 HMGB3P26-201ENST00000560051 582 ntBASIC3.86□□□□□ -1.79
TRIM49D1C9J1S8 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.86□□□□□ -1.79
TRIM49D1C9J1S8 RPL21P136-201ENST00000605378 396 ntBASIC3.86□□□□□ -1.79
TRIM49D1C9J1S8 AC090948.2-201ENST00000607363 564 ntBASIC3.86□□□□□ -1.79
TRIM49D1C9J1S8 MIR6798-201ENST00000612887 67 ntBASIC3.86□□□□□ -1.79
TRIM49D1C9J1S8 OR5AC4P-202ENST00000642086 985 ntBASIC3.86□□□□□ -1.79
TRIM49D1C9J1S8 AL451142.2-201ENST00000429076 2090 ntBASIC3.86□□□□□ -1.79
TRIM49D1C9J1S8 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TRIM49D1C9J1S8 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.86□□□□□ -1.79
TRIM49D1C9J1S8 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
TRIM49D1C9J1S8 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC3.85□□□□□ -1.79
TRIM49D1C9J1S8 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
TRIM49D1C9J1S8 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
TRIM49D1C9J1S8 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
TRIM49D1C9J1S8 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
TRIM49D1C9J1S8 MIR421-201ENST00000365696 85 ntBASIC3.85□□□□□ -1.79
TRIM49D1C9J1S8 SNORA40.4-201ENST00000390971 128 ntBASIC3.85□□□□□ -1.79
TRIM49D1C9J1S8 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.85□□□□□ -1.79
TRIM49D1C9J1S8 AMD1P2-201ENST00000412936 992 ntBASIC3.85□□□□□ -1.79
TRIM49D1C9J1S8 AL592293.2-201ENST00000422292 996 ntBASIC3.85□□□□□ -1.79
TRIM49D1C9J1S8 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC3.85□□□□□ -1.79
TRIM49D1C9J1S8 AC115285.1-201ENST00000424879 736 ntBASIC3.85□□□□□ -1.79
TRIM49D1C9J1S8 COX6CP15-201ENST00000426313 211 ntBASIC3.85□□□□□ -1.79
TRIM49D1C9J1S8 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.85□□□□□ -1.79
TRIM49D1C9J1S8 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.85□□□□□ -1.79
TRIM49D1C9J1S8 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.85□□□□□ -1.79
TRIM49D1C9J1S8 ZFAND6P1-201ENST00000434138 605 ntBASIC3.85□□□□□ -1.79
TRIM49D1C9J1S8 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.85□□□□□ -1.79
TRIM49D1C9J1S8 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.85□□□□□ -1.79
TRIM49D1C9J1S8 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC3.85□□□□□ -1.79
TRIM49D1C9J1S8 RPS15AP29-201ENST00000445539 400 ntBASIC3.85□□□□□ -1.79
TRIM49D1C9J1S8 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.85□□□□□ -1.79
TRIM49D1C9J1S8 HGF-207ENST00000453018 721 ntTSL 3 BASIC3.85□□□□□ -1.79
TRIM49D1C9J1S8 RPL7AP52-201ENST00000458096 790 ntBASIC3.85□□□□□ -1.79
TRIM49D1C9J1S8 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.85□□□□□ -1.79
TRIM49D1C9J1S8 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TRIM49D1C9J1S8 RNA5SP208-201ENST00000516156 78 ntBASIC3.85□□□□□ -1.79
TRIM49D1C9J1S8 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TRIM49D1C9J1S8 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.85□□□□□ -1.79
TRIM49D1C9J1S8 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.85□□□□□ -1.79
TRIM49D1C9J1S8 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.85□□□□□ -1.79
TRIM49D1C9J1S8 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.85□□□□□ -1.79
TRIM49D1C9J1S8 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC3.85□□□□□ -1.79
TRIM49D1C9J1S8 MIR4284-201ENST00000578924 81 ntBASIC3.85□□□□□ -1.79
TRIM49D1C9J1S8 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.85□□□□□ -1.79
TRIM49D1C9J1S8 AL139286.1-201ENST00000604465 483 ntBASIC3.85□□□□□ -1.79
TRIM49D1C9J1S8 AL356094.1-201ENST00000624663 1212 ntBASIC3.85□□□□□ -1.79
TRIM49D1C9J1S8 BMS1P21-201ENST00000634565 365 ntBASIC3.85□□□□□ -1.79
TRIM49D1C9J1S8 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC3.85□□□□□ -1.79
TRIM49D1C9J1S8 OR6C71P-202ENST00000641886 1107 ntBASIC3.85□□□□□ -1.79
TRIM49D1C9J1S8 BX005019.1-201ENST00000561881 1810 ntBASIC3.85□□□□□ -1.79
TRIM49D1C9J1S8 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TRIM49D1C9J1S8 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TRIM49D1C9J1S8 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TRIM49D1C9J1S8 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
TRIM49D1C9J1S8 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
TRIM49D1C9J1S8 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
TRIM49D1C9J1S8 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
TRIM49D1C9J1S8 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
TRIM49D1C9J1S8 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.84□□□□□ -1.79
TRIM49D1C9J1S8 HSPA8P1-201ENST00000425843 1833 ntBASIC3.84□□□□□ -1.79
TRIM49D1C9J1S8 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.84□□□□□ -1.79
TRIM49D1C9J1S8 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
TRIM49D1C9J1S8 PHKBP1-201ENST00000450951 1951 ntBASIC3.84□□□□□ -1.79
TRIM49D1C9J1S8 MIR423-201ENST00000362201 94 ntBASIC3.84□□□□□ -1.79
TRIM49D1C9J1S8 RNU6-984P-201ENST00000363236 109 ntBASIC3.84□□□□□ -1.79
TRIM49D1C9J1S8 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
TRIM49D1C9J1S8 ENSAP1-201ENST00000392855 326 ntBASIC3.84□□□□□ -1.79
TRIM49D1C9J1S8 AL603766.1-201ENST00000407763 664 ntBASIC3.84□□□□□ -1.79
TRIM49D1C9J1S8 MTND4LP7-201ENST00000431728 294 ntBASIC3.84□□□□□ -1.79
TRIM49D1C9J1S8 MRPL50P1-201ENST00000431951 384 ntBASIC3.84□□□□□ -1.79
TRIM49D1C9J1S8 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC3.84□□□□□ -1.79
TRIM49D1C9J1S8 AL357520.1-201ENST00000441557 453 ntBASIC3.84□□□□□ -1.79
TRIM49D1C9J1S8 ZNF736P11Y-201ENST00000442535 1213 ntBASIC3.84□□□□□ -1.79
TRIM49D1C9J1S8 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.84□□□□□ -1.79
TRIM49D1C9J1S8 ZNF736P12Y-201ENST00000443152 1243 ntBASIC3.84□□□□□ -1.79
TRIM49D1C9J1S8 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
TRIM49D1C9J1S8 EIF4A1P11-201ENST00000451239 222 ntBASIC3.84□□□□□ -1.79
TRIM49D1C9J1S8 ZNF736P4Y-201ENST00000454995 1243 ntBASIC3.84□□□□□ -1.79
TRIM49D1C9J1S8 NDUFA5P9-201ENST00000472609 340 ntBASIC3.84□□□□□ -1.79
TRIM49D1C9J1S8 RWDD4P1-201ENST00000488019 565 ntBASIC3.84□□□□□ -1.79
TRIM49D1C9J1S8 AC083829.1-201ENST00000503756 657 ntBASIC3.84□□□□□ -1.79
TRIM49D1C9J1S8 HPRT1P1-201ENST00000509498 657 ntBASIC3.84□□□□□ -1.79
TRIM49D1C9J1S8 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC3.84□□□□□ -1.79
TRIM49D1C9J1S8 RN7SKP209-201ENST00000516888 304 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms