Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC66A2RUB6 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.77□□□□□ -1.49
CCDC66A2RUB6 AL008729.2-201ENST00000606393 473 ntBASIC5.77□□□□□ -1.49
CCDC66A2RUB6 AC012360.2-201ENST00000609349 391 ntBASIC5.77□□□□□ -1.49
CCDC66A2RUB6 AC087241.4-201ENST00000612441 480 ntBASIC5.77□□□□□ -1.49
CCDC66A2RUB6 AC234782.5-201ENST00000617723 324 ntBASIC5.77□□□□□ -1.49
CCDC66A2RUB6 AC129915.3-201ENST00000634128 948 ntBASIC5.77□□□□□ -1.49
CCDC66A2RUB6 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
CCDC66A2RUB6 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
CCDC66A2RUB6 AC073869.8-201ENST00000641806 335 ntBASIC5.77□□□□□ -1.49
CCDC66A2RUB6 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.77□□□□□ -1.49
CCDC66A2RUB6 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC66A2RUB6 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC66A2RUB6 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC66A2RUB6 MRE11P1-201ENST00000464884 2127 ntBASIC5.77□□□□□ -1.49
CCDC66A2RUB6 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
CCDC66A2RUB6 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
CCDC66A2RUB6 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC66A2RUB6 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
CCDC66A2RUB6 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC66A2RUB6 RNA5SP131-201ENST00000365452 119 ntBASIC5.76□□□□□ -1.49
CCDC66A2RUB6 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC5.76□□□□□ -1.49
CCDC66A2RUB6 SNORD116-23-201ENST00000384645 92 ntBASIC5.76□□□□□ -1.49
CCDC66A2RUB6 AC007899.1-201ENST00000412776 775 ntBASIC5.76□□□□□ -1.49
CCDC66A2RUB6 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.76□□□□□ -1.49
CCDC66A2RUB6 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.76□□□□□ -1.49
CCDC66A2RUB6 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.76□□□□□ -1.49
CCDC66A2RUB6 AC127526.2-201ENST00000426436 775 ntBASIC5.76□□□□□ -1.49
CCDC66A2RUB6 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC5.76□□□□□ -1.49
CCDC66A2RUB6 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.76□□□□□ -1.49
CCDC66A2RUB6 AL035551.1-201ENST00000446931 348 ntBASIC5.76□□□□□ -1.49
CCDC66A2RUB6 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC66A2RUB6 RPS27AP15-201ENST00000447672 466 ntBASIC5.76□□□□□ -1.49
CCDC66A2RUB6 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC5.76□□□□□ -1.49
CCDC66A2RUB6 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC66A2RUB6 AL133244.1-201ENST00000456007 258 ntBASIC5.76□□□□□ -1.49
CCDC66A2RUB6 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.76□□□□□ -1.49
CCDC66A2RUB6 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC5.76□□□□□ -1.49
CCDC66A2RUB6 AC112206.1-201ENST00000468416 477 ntBASIC5.76□□□□□ -1.49
CCDC66A2RUB6 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.76□□□□□ -1.49
CCDC66A2RUB6 RPL7P38-201ENST00000488396 739 ntBASIC5.76□□□□□ -1.49
CCDC66A2RUB6 AC113430.1-201ENST00000506872 718 ntBASIC5.76□□□□□ -1.49
CCDC66A2RUB6 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.76□□□□□ -1.49
CCDC66A2RUB6 SCARNA20.4-201ENST00000516969 131 ntBASIC5.76□□□□□ -1.49
CCDC66A2RUB6 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.76□□□□□ -1.49
CCDC66A2RUB6 AC134698.5-201ENST00000519444 336 ntBASIC5.76□□□□□ -1.49
CCDC66A2RUB6 AC008562.1-201ENST00000521763 330 ntBASIC5.76□□□□□ -1.49
CCDC66A2RUB6 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC5.76□□□□□ -1.49
CCDC66A2RUB6 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC5.76□□□□□ -1.49
CCDC66A2RUB6 AC138915.2-201ENST00000569776 97 ntBASIC5.76□□□□□ -1.49
CCDC66A2RUB6 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.76□□□□□ -1.49
CCDC66A2RUB6 MIR4801-201ENST00000582704 82 ntBASIC5.76□□□□□ -1.49
CCDC66A2RUB6 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC66A2RUB6 AC108738.1-201ENST00000603703 237 ntBASIC5.76□□□□□ -1.49
CCDC66A2RUB6 AC092794.1-201ENST00000612734 582 ntBASIC5.76□□□□□ -1.49
CCDC66A2RUB6 AC006927.3-201ENST00000638789 384 ntBASIC5.76□□□□□ -1.49
CCDC66A2RUB6 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC66A2RUB6 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC66A2RUB6 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC66A2RUB6 LINC01109-201ENST00000603837 3081 ntBASIC5.76□□□□□ -1.49
CCDC66A2RUB6 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC66A2RUB6 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
CCDC66A2RUB6 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.76□□□□□ -1.49
CCDC66A2RUB6 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC66A2RUB6 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
CCDC66A2RUB6 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC66A2RUB6 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC66A2RUB6 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC66A2RUB6 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
CCDC66A2RUB6 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.75□□□□□ -1.49
CCDC66A2RUB6 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC66A2RUB6 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC5.75□□□□□ -1.49
CCDC66A2RUB6 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.75□□□□□ -1.49
CCDC66A2RUB6 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC66A2RUB6 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
CCDC66A2RUB6 RNA5SP510-201ENST00000364697 99 ntBASIC5.75□□□□□ -1.49
CCDC66A2RUB6 Y_RNA.302-201ENST00000364997 102 ntBASIC5.75□□□□□ -1.49
CCDC66A2RUB6 MIR551A-201ENST00000385042 96 ntBASIC5.75□□□□□ -1.49
CCDC66A2RUB6 RPS3AP2-201ENST00000407190 754 ntBASIC5.75□□□□□ -1.49
CCDC66A2RUB6 MIR1284-201ENST00000408337 120 ntBASIC5.75□□□□□ -1.49
CCDC66A2RUB6 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC5.75□□□□□ -1.49
CCDC66A2RUB6 MTCYBP5-201ENST00000423752 1135 ntBASIC5.75□□□□□ -1.49
CCDC66A2RUB6 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.75□□□□□ -1.49
CCDC66A2RUB6 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC66A2RUB6 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC66A2RUB6 RPL19P16-201ENST00000433839 588 ntBASIC5.75□□□□□ -1.49
CCDC66A2RUB6 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC5.75□□□□□ -1.49
CCDC66A2RUB6 Z74696.2-201ENST00000436514 498 ntBASIC5.75□□□□□ -1.49
CCDC66A2RUB6 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.75□□□□□ -1.49
CCDC66A2RUB6 AL031663.1-201ENST00000437445 219 ntBASIC5.75□□□□□ -1.49
CCDC66A2RUB6 AC090804.1-201ENST00000448870 490 ntBASIC5.75□□□□□ -1.49
CCDC66A2RUB6 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC66A2RUB6 AC011825.1-201ENST00000484967 388 ntBASIC5.75□□□□□ -1.49
CCDC66A2RUB6 AC011352.3-201ENST00000505162 593 ntBASIC5.75□□□□□ -1.49
CCDC66A2RUB6 MTCO1P30-201ENST00000515244 580 ntBASIC5.75□□□□□ -1.49
CCDC66A2RUB6 HIGD1AP6-201ENST00000521833 279 ntBASIC5.75□□□□□ -1.49
CCDC66A2RUB6 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC66A2RUB6 PCNPP1-201ENST00000552501 511 ntBASIC5.75□□□□□ -1.49
CCDC66A2RUB6 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.75□□□□□ -1.49
CCDC66A2RUB6 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms