Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 BMS1P7-201ENST00000602440 1052 ntBASIC4.17□□□□□ -1.74
SMIM28A0A1B0GU29 AC012467.1-201ENST00000607740 256 ntBASIC4.17□□□□□ -1.74
SMIM28A0A1B0GU29 AC084036.1-201ENST00000609190 508 ntBASIC4.17□□□□□ -1.74
SMIM28A0A1B0GU29 AC005344.1-201ENST00000613391 459 ntBASIC4.17□□□□□ -1.74
SMIM28A0A1B0GU29 AC104307.1-201ENST00000616142 196 ntBASIC4.17□□□□□ -1.74
SMIM28A0A1B0GU29 AL591424.2-201ENST00000617023 128 ntBASIC4.17□□□□□ -1.74
SMIM28A0A1B0GU29 AC012442.3-202ENST00000636742 206 ntBASIC4.17□□□□□ -1.74
SMIM28A0A1B0GU29 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SMIM28A0A1B0GU29 AP004289.2-201ENST00000444413 1457 ntBASIC4.17□□□□□ -1.74
SMIM28A0A1B0GU29 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SMIM28A0A1B0GU29 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SMIM28A0A1B0GU29 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SMIM28A0A1B0GU29 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SMIM28A0A1B0GU29 AC005332.5-201ENST00000591222 2919 ntBASIC4.16□□□□□ -1.74
SMIM28A0A1B0GU29 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.16□□□□□ -1.74
SMIM28A0A1B0GU29 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SMIM28A0A1B0GU29 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
SMIM28A0A1B0GU29 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SMIM28A0A1B0GU29 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SMIM28A0A1B0GU29 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SMIM28A0A1B0GU29 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
SMIM28A0A1B0GU29 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SMIM28A0A1B0GU29 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SMIM28A0A1B0GU29 RNU1-85P-201ENST00000364127 164 ntBASIC4.16□□□□□ -1.74
SMIM28A0A1B0GU29 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.16□□□□□ -1.74
SMIM28A0A1B0GU29 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SMIM28A0A1B0GU29 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.16□□□□□ -1.74
SMIM28A0A1B0GU29 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.16□□□□□ -1.74
SMIM28A0A1B0GU29 RAB9AP3-201ENST00000412737 573 ntBASIC4.16□□□□□ -1.74
SMIM28A0A1B0GU29 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
SMIM28A0A1B0GU29 OR6C64P-201ENST00000419708 825 ntBASIC4.16□□□□□ -1.74
SMIM28A0A1B0GU29 EIF4EP1-201ENST00000422311 642 ntBASIC4.16□□□□□ -1.74
SMIM28A0A1B0GU29 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC4.16□□□□□ -1.74
SMIM28A0A1B0GU29 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SMIM28A0A1B0GU29 AP000936.3-201ENST00000438127 255 ntBASIC4.16□□□□□ -1.74
SMIM28A0A1B0GU29 VN1R48P-201ENST00000448149 1036 ntBASIC4.16□□□□□ -1.74
SMIM28A0A1B0GU29 RAB9AP1-201ENST00000449393 573 ntBASIC4.16□□□□□ -1.74
SMIM28A0A1B0GU29 AP002345.1-201ENST00000456493 928 ntBASIC4.16□□□□□ -1.74
SMIM28A0A1B0GU29 AC104629.2-201ENST00000468627 598 ntBASIC4.16□□□□□ -1.74
SMIM28A0A1B0GU29 ACTR3P3-201ENST00000480448 893 ntBASIC4.16□□□□□ -1.74
SMIM28A0A1B0GU29 NPM1P29-201ENST00000483112 803 ntBASIC4.16□□□□□ -1.74
SMIM28A0A1B0GU29 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.16□□□□□ -1.74
SMIM28A0A1B0GU29 AP002812.1-201ENST00000495378 474 ntBASIC4.16□□□□□ -1.74
SMIM28A0A1B0GU29 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.16□□□□□ -1.74
SMIM28A0A1B0GU29 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SMIM28A0A1B0GU29 AC098799.1-201ENST00000504752 800 ntBASIC4.16□□□□□ -1.74
SMIM28A0A1B0GU29 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC4.16□□□□□ -1.74
SMIM28A0A1B0GU29 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.16□□□□□ -1.74
SMIM28A0A1B0GU29 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.16□□□□□ -1.74
SMIM28A0A1B0GU29 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.16□□□□□ -1.74
SMIM28A0A1B0GU29 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.16□□□□□ -1.74
SMIM28A0A1B0GU29 MIR4429-201ENST00000580105 73 ntBASIC4.16□□□□□ -1.74
SMIM28A0A1B0GU29 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.16□□□□□ -1.74
SMIM28A0A1B0GU29 MTCO2P22-201ENST00000603246 681 ntBASIC4.16□□□□□ -1.74
SMIM28A0A1B0GU29 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.16□□□□□ -1.74
SMIM28A0A1B0GU29 AL353600.1-201ENST00000608148 251 ntBASIC4.16□□□□□ -1.74
SMIM28A0A1B0GU29 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.16□□□□□ -1.74
SMIM28A0A1B0GU29 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.16□□□□□ -1.74
SMIM28A0A1B0GU29 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.16□□□□□ -1.74
SMIM28A0A1B0GU29 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.16□□□□□ -1.74
SMIM28A0A1B0GU29 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SMIM28A0A1B0GU29 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.16□□□□□ -1.74
SMIM28A0A1B0GU29 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SMIM28A0A1B0GU29 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SMIM28A0A1B0GU29 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
SMIM28A0A1B0GU29 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
SMIM28A0A1B0GU29 ZNF962P-201ENST00000443465 3140 ntBASIC4.15□□□□□ -1.74
SMIM28A0A1B0GU29 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.15□□□□□ -1.74
SMIM28A0A1B0GU29 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
SMIM28A0A1B0GU29 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.15□□□□□ -1.74
SMIM28A0A1B0GU29 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.15□□□□□ -1.75
SMIM28A0A1B0GU29 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SMIM28A0A1B0GU29 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SMIM28A0A1B0GU29 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.15□□□□□ -1.75
SMIM28A0A1B0GU29 SNORA27.3-201ENST00000364937 134 ntBASIC4.15□□□□□ -1.75
SMIM28A0A1B0GU29 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.15□□□□□ -1.75
SMIM28A0A1B0GU29 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
SMIM28A0A1B0GU29 RNU6-178P-201ENST00000384631 104 ntBASIC4.15□□□□□ -1.75
SMIM28A0A1B0GU29 MIR513A2-201ENST00000385249 127 ntBASIC4.15□□□□□ -1.75
SMIM28A0A1B0GU29 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.15□□□□□ -1.75
SMIM28A0A1B0GU29 AC009302.1-201ENST00000417147 390 ntBASIC4.15□□□□□ -1.75
SMIM28A0A1B0GU29 MTND2P15-201ENST00000418575 892 ntBASIC4.15□□□□□ -1.75
SMIM28A0A1B0GU29 AL591419.1-201ENST00000427423 339 ntBASIC4.15□□□□□ -1.75
SMIM28A0A1B0GU29 NPM1P34-201ENST00000428821 893 ntBASIC4.15□□□□□ -1.75
SMIM28A0A1B0GU29 KCTD9P3-201ENST00000434597 1169 ntBASIC4.15□□□□□ -1.75
SMIM28A0A1B0GU29 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.15□□□□□ -1.75
SMIM28A0A1B0GU29 AL133547.1-201ENST00000448546 220 ntBASIC4.15□□□□□ -1.75
SMIM28A0A1B0GU29 RPS17P13-201ENST00000448974 407 ntBASIC4.15□□□□□ -1.75
SMIM28A0A1B0GU29 CALM1P2-201ENST00000452941 448 ntBASIC4.15□□□□□ -1.75
SMIM28A0A1B0GU29 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.15□□□□□ -1.75
SMIM28A0A1B0GU29 AC089999.1-201ENST00000460336 374 ntBASIC4.15□□□□□ -1.75
SMIM28A0A1B0GU29 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.15□□□□□ -1.75
SMIM28A0A1B0GU29 AC034244.2-201ENST00000514668 858 ntBASIC4.15□□□□□ -1.75
SMIM28A0A1B0GU29 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.15□□□□□ -1.75
SMIM28A0A1B0GU29 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.15□□□□□ -1.75
SMIM28A0A1B0GU29 TRMT10BP1-201ENST00000519377 943 ntBASIC4.15□□□□□ -1.75
SMIM28A0A1B0GU29 AC022695.1-201ENST00000522089 237 ntBASIC4.15□□□□□ -1.75
SMIM28A0A1B0GU29 AC109635.6-201ENST00000525487 1113 ntBASIC4.15□□□□□ -1.75
SMIM28A0A1B0GU29 MIMT1-201ENST00000597105 1050 ntBASIC4.15□□□□□ -1.75
SMIM28A0A1B0GU29 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms