Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.79□□□□□ -1.64
SNX9Q9Y5X1 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.79□□□□□ -1.64
SNX9Q9Y5X1 MIR4284-201ENST00000578924 81 ntBASIC4.79□□□□□ -1.64
SNX9Q9Y5X1 AC012254.4-201ENST00000588843 273 ntBASIC4.79□□□□□ -1.64
SNX9Q9Y5X1 AC012557.1-201ENST00000607115 611 ntBASIC4.79□□□□□ -1.64
SNX9Q9Y5X1 RNU4-5P-201ENST00000607255 135 ntBASIC4.79□□□□□ -1.64
SNX9Q9Y5X1 AC090948.1-201ENST00000607464 549 ntBASIC4.79□□□□□ -1.64
SNX9Q9Y5X1 MIR378J-201ENST00000611988 109 ntBASIC4.79□□□□□ -1.64
SNX9Q9Y5X1 AC009237.17-201ENST00000618111 748 ntBASIC4.79□□□□□ -1.64
SNX9Q9Y5X1 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SNX9Q9Y5X1 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.79□□□□□ -1.64
SNX9Q9Y5X1 AC119674.1-212ENST00000641155 993 ntBASIC4.79□□□□□ -1.64
SNX9Q9Y5X1 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
SNX9Q9Y5X1 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SNX9Q9Y5X1 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.79□□□□□ -1.64
SNX9Q9Y5X1 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.79□□□□□ -1.64
SNX9Q9Y5X1 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.79□□□□□ -1.64
SNX9Q9Y5X1 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
SNX9Q9Y5X1 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
SNX9Q9Y5X1 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.78□□□□□ -1.64
SNX9Q9Y5X1 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
SNX9Q9Y5X1 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.78□□□□□ -1.64
SNX9Q9Y5X1 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.78□□□□□ -1.64
SNX9Q9Y5X1 AC006971.1-201ENST00000407916 4486 ntBASIC4.78□□□□□ -1.64
SNX9Q9Y5X1 OR10J6P-201ENST00000289731 930 ntBASIC4.78□□□□□ -1.64
SNX9Q9Y5X1 AC126755.2-208ENST00000327792 462 ntBASIC4.78□□□□□ -1.64
SNX9Q9Y5X1 AC138969.1-213ENST00000331436 462 ntBASIC4.78□□□□□ -1.64
SNX9Q9Y5X1 IL6STP1-201ENST00000346911 1020 ntBASIC4.78□□□□□ -1.64
SNX9Q9Y5X1 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
SNX9Q9Y5X1 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SNX9Q9Y5X1 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.78□□□□□ -1.64
SNX9Q9Y5X1 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
SNX9Q9Y5X1 MIR320B1-201ENST00000390209 79 ntBASIC4.78□□□□□ -1.64
SNX9Q9Y5X1 AL592310.1-201ENST00000414330 671 ntBASIC4.78□□□□□ -1.64
SNX9Q9Y5X1 AC048351.1-201ENST00000420064 602 ntBASIC4.78□□□□□ -1.64
SNX9Q9Y5X1 RPL12P34-201ENST00000424532 479 ntBASIC4.78□□□□□ -1.64
SNX9Q9Y5X1 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC4.78□□□□□ -1.64
SNX9Q9Y5X1 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SNX9Q9Y5X1 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SNX9Q9Y5X1 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.78□□□□□ -1.64
SNX9Q9Y5X1 NDUFAF4P2-201ENST00000445374 520 ntBASIC4.78□□□□□ -1.64
SNX9Q9Y5X1 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.78□□□□□ -1.64
SNX9Q9Y5X1 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC4.78□□□□□ -1.64
SNX9Q9Y5X1 RPL23AP24-201ENST00000458203 385 ntBASIC4.78□□□□□ -1.64
SNX9Q9Y5X1 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.78□□□□□ -1.64
SNX9Q9Y5X1 PPIAP21-201ENST00000464473 501 ntBASIC4.78□□□□□ -1.64
SNX9Q9Y5X1 AC053481.1-201ENST00000467217 306 ntBASIC4.78□□□□□ -1.64
SNX9Q9Y5X1 CEACAMP10-202ENST00000495431 496 ntBASIC4.78□□□□□ -1.64
SNX9Q9Y5X1 CDH12P2-201ENST00000504393 298 ntBASIC4.78□□□□□ -1.64
SNX9Q9Y5X1 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SNX9Q9Y5X1 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.78□□□□□ -1.64
SNX9Q9Y5X1 AC025674.1-201ENST00000507074 324 ntBASIC4.78□□□□□ -1.64
SNX9Q9Y5X1 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC4.78□□□□□ -1.64
SNX9Q9Y5X1 RNA5SP446-201ENST00000515955 82 ntBASIC4.78□□□□□ -1.64
SNX9Q9Y5X1 RNA5SP497-201ENST00000516081 97 ntBASIC4.78□□□□□ -1.64
SNX9Q9Y5X1 SNORA31.13-201ENST00000516624 135 ntBASIC4.78□□□□□ -1.64
SNX9Q9Y5X1 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC4.78□□□□□ -1.64
SNX9Q9Y5X1 LRRC34P1-201ENST00000542742 915 ntBASIC4.78□□□□□ -1.64
SNX9Q9Y5X1 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC4.78□□□□□ -1.64
SNX9Q9Y5X1 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.78□□□□□ -1.64
SNX9Q9Y5X1 AC090312.1-201ENST00000580637 348 ntBASIC4.78□□□□□ -1.64
SNX9Q9Y5X1 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.78□□□□□ -1.64
SNX9Q9Y5X1 ELOCP28-201ENST00000590044 317 ntBASIC4.78□□□□□ -1.64
SNX9Q9Y5X1 HMGB2P1-201ENST00000591146 634 ntBASIC4.78□□□□□ -1.64
SNX9Q9Y5X1 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.78□□□□□ -1.64
SNX9Q9Y5X1 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.78□□□□□ -1.64
SNX9Q9Y5X1 AC090181.2-201ENST00000602975 672 ntBASIC4.78□□□□□ -1.64
SNX9Q9Y5X1 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.78□□□□□ -1.64
SNX9Q9Y5X1 AL450336.1-201ENST00000605180 586 ntBASIC4.78□□□□□ -1.64
SNX9Q9Y5X1 AC009974.1-201ENST00000608881 455 ntBASIC4.78□□□□□ -1.64
SNX9Q9Y5X1 AC048344.4-201ENST00000619744 527 ntBASIC4.78□□□□□ -1.64
SNX9Q9Y5X1 AC091905.2-201ENST00000623143 306 ntBASIC4.78□□□□□ -1.64
SNX9Q9Y5X1 AC083865.1-201ENST00000636634 831 ntBASIC4.78□□□□□ -1.64
SNX9Q9Y5X1 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SNX9Q9Y5X1 AC010300.1-201ENST00000600671 5134 ntBASIC4.78□□□□□ -1.64
SNX9Q9Y5X1 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.78□□□□□ -1.64
SNX9Q9Y5X1 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SNX9Q9Y5X1 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.78□□□□□ -1.64
SNX9Q9Y5X1 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SNX9Q9Y5X1 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SNX9Q9Y5X1 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.77□□□□□ -1.65
SNX9Q9Y5X1 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
SNX9Q9Y5X1 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
SNX9Q9Y5X1 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.77□□□□□ -1.65
SNX9Q9Y5X1 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.77□□□□□ -1.65
SNX9Q9Y5X1 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
SNX9Q9Y5X1 MFSD8-242ENST00000641690 4199 ntBASIC4.77□□□□□ -1.65
SNX9Q9Y5X1 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.77□□□□□ -1.65
SNX9Q9Y5X1 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
SNX9Q9Y5X1 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
SNX9Q9Y5X1 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
SNX9Q9Y5X1 RNU1-63P-201ENST00000383902 164 ntBASIC4.77□□□□□ -1.65
SNX9Q9Y5X1 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.77□□□□□ -1.65
SNX9Q9Y5X1 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.77□□□□□ -1.65
SNX9Q9Y5X1 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.77□□□□□ -1.65
SNX9Q9Y5X1 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC4.77□□□□□ -1.65
SNX9Q9Y5X1 AL592293.2-201ENST00000422292 996 ntBASIC4.77□□□□□ -1.65
SNX9Q9Y5X1 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.77□□□□□ -1.65
SNX9Q9Y5X1 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC4.77□□□□□ -1.65
SNX9Q9Y5X1 RPL23AP25-201ENST00000430973 463 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms