Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 AC093510.2-201ENST00000562820 896 ntBASIC4.43□□□□□ -1.7
PCDHGA1Q9Y5H4 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.43□□□□□ -1.7
PCDHGA1Q9Y5H4 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.43□□□□□ -1.7
PCDHGA1Q9Y5H4 MIR92B-201ENST00000607575 96 ntBASIC4.43□□□□□ -1.7
PCDHGA1Q9Y5H4 AC234782.5-201ENST00000617723 324 ntBASIC4.43□□□□□ -1.7
PCDHGA1Q9Y5H4 AC006249.1-201ENST00000621223 471 ntBASIC4.43□□□□□ -1.7
PCDHGA1Q9Y5H4 AC138907.10-201ENST00000623708 983 ntBASIC4.43□□□□□ -1.7
PCDHGA1Q9Y5H4 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC4.43□□□□□ -1.7
PCDHGA1Q9Y5H4 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.43□□□□□ -1.7
PCDHGA1Q9Y5H4 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
PCDHGA1Q9Y5H4 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
PCDHGA1Q9Y5H4 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHGA1Q9Y5H4 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.43□□□□□ -1.7
PCDHGA1Q9Y5H4 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
PCDHGA1Q9Y5H4 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
PCDHGA1Q9Y5H4 AL136964.1-201ENST00000622038 2990 ntBASIC4.43□□□□□ -1.7
PCDHGA1Q9Y5H4 AC008432.1-201ENST00000615912 1320 ntBASIC4.43□□□□□ -1.7
PCDHGA1Q9Y5H4 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHGA1Q9Y5H4 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHGA1Q9Y5H4 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHGA1Q9Y5H4 PNPT1P2-201ENST00000456768 2050 ntBASIC4.42□□□□□ -1.7
PCDHGA1Q9Y5H4 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHGA1Q9Y5H4 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.42□□□□□ -1.7
PCDHGA1Q9Y5H4 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
PCDHGA1Q9Y5H4 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHGA1Q9Y5H4 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHGA1Q9Y5H4 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHGA1Q9Y5H4 RNU6-1005P-201ENST00000384519 107 ntBASIC4.42□□□□□ -1.7
PCDHGA1Q9Y5H4 RPL36AP36-201ENST00000418616 301 ntBASIC4.42□□□□□ -1.7
PCDHGA1Q9Y5H4 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.42□□□□□ -1.7
PCDHGA1Q9Y5H4 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.42□□□□□ -1.7
PCDHGA1Q9Y5H4 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHGA1Q9Y5H4 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.42□□□□□ -1.7
PCDHGA1Q9Y5H4 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHGA1Q9Y5H4 NDUFAF4P2-201ENST00000445374 520 ntBASIC4.42□□□□□ -1.7
PCDHGA1Q9Y5H4 PHBP16-201ENST00000446318 950 ntBASIC4.42□□□□□ -1.7
PCDHGA1Q9Y5H4 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.42□□□□□ -1.7
PCDHGA1Q9Y5H4 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.42□□□□□ -1.7
PCDHGA1Q9Y5H4 AL645939.1-201ENST00000453429 797 ntBASIC4.42□□□□□ -1.7
PCDHGA1Q9Y5H4 AC119744.1-201ENST00000454746 1715 ntBASIC4.42□□□□□ -1.7
PCDHGA1Q9Y5H4 AC105137.1-201ENST00000484355 562 ntBASIC4.42□□□□□ -1.7
PCDHGA1Q9Y5H4 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHGA1Q9Y5H4 AC098799.3-201ENST00000506095 438 ntBASIC4.42□□□□□ -1.7
PCDHGA1Q9Y5H4 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.42□□□□□ -1.7
PCDHGA1Q9Y5H4 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.42□□□□□ -1.7
PCDHGA1Q9Y5H4 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.42□□□□□ -1.7
PCDHGA1Q9Y5H4 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.42□□□□□ -1.7
PCDHGA1Q9Y5H4 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC4.42□□□□□ -1.7
PCDHGA1Q9Y5H4 GLRXP2-201ENST00000555594 321 ntBASIC4.42□□□□□ -1.7
PCDHGA1Q9Y5H4 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC4.42□□□□□ -1.7
PCDHGA1Q9Y5H4 AC015911.5-201ENST00000587076 451 ntBASIC4.42□□□□□ -1.7
PCDHGA1Q9Y5H4 AC067852.4-201ENST00000590314 478 ntBASIC4.42□□□□□ -1.7
PCDHGA1Q9Y5H4 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.42□□□□□ -1.7
PCDHGA1Q9Y5H4 AP003117.1-201ENST00000602771 554 ntBASIC4.42□□□□□ -1.7
PCDHGA1Q9Y5H4 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
PCDHGA1Q9Y5H4 AC120053.1-201ENST00000607706 736 ntBASIC4.42□□□□□ -1.7
PCDHGA1Q9Y5H4 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.42□□□□□ -1.7
PCDHGA1Q9Y5H4 MIR8084-201ENST00000614105 89 ntBASIC4.42□□□□□ -1.7
PCDHGA1Q9Y5H4 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.42□□□□□ -1.7
PCDHGA1Q9Y5H4 MIR6864-201ENST00000617935 70 ntBASIC4.42□□□□□ -1.7
PCDHGA1Q9Y5H4 FRG1HP-204ENST00000617940 757 ntBASIC4.42□□□□□ -1.7
PCDHGA1Q9Y5H4 RNA5SP196-201ENST00000625967 102 ntBASIC4.42□□□□□ -1.7
PCDHGA1Q9Y5H4 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.42□□□□□ -1.7
PCDHGA1Q9Y5H4 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHGA1Q9Y5H4 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHGA1Q9Y5H4 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.42□□□□□ -1.7
PCDHGA1Q9Y5H4 ERCC6-202ENST00000374127 1782 ntBASIC4.42□□□□□ -1.7
PCDHGA1Q9Y5H4 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHGA1Q9Y5H4 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
PCDHGA1Q9Y5H4 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHGA1Q9Y5H4 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
PCDHGA1Q9Y5H4 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHGA1Q9Y5H4 AL136164.3-201ENST00000624429 3978 ntBASIC4.41□□□□□ -1.7
PCDHGA1Q9Y5H4 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.41□□□□□ -1.7
PCDHGA1Q9Y5H4 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHGA1Q9Y5H4 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
PCDHGA1Q9Y5H4 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.41□□□□□ -1.7
PCDHGA1Q9Y5H4 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHGA1Q9Y5H4 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.41□□□□□ -1.7
PCDHGA1Q9Y5H4 OR5P1P-201ENST00000299512 925 ntBASIC4.41□□□□□ -1.7
PCDHGA1Q9Y5H4 ENSAP3-201ENST00000312710 333 ntBASIC4.41□□□□□ -1.7
PCDHGA1Q9Y5H4 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.41□□□□□ -1.7
PCDHGA1Q9Y5H4 RPL21P108-201ENST00000413857 481 ntBASIC4.41□□□□□ -1.7
PCDHGA1Q9Y5H4 AC008173.1-201ENST00000418901 264 ntBASIC4.41□□□□□ -1.7
PCDHGA1Q9Y5H4 EIF4A1P1-201ENST00000420241 934 ntBASIC4.41□□□□□ -1.7
PCDHGA1Q9Y5H4 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC4.41□□□□□ -1.7
PCDHGA1Q9Y5H4 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC4.41□□□□□ -1.7
PCDHGA1Q9Y5H4 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC4.41□□□□□ -1.7
PCDHGA1Q9Y5H4 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC4.41□□□□□ -1.7
PCDHGA1Q9Y5H4 MOB1AP2-201ENST00000446060 614 ntBASIC4.41□□□□□ -1.7
PCDHGA1Q9Y5H4 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHGA1Q9Y5H4 RPS7P7-201ENST00000463499 571 ntBASIC4.41□□□□□ -1.7
PCDHGA1Q9Y5H4 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.41□□□□□ -1.7
PCDHGA1Q9Y5H4 AC104689.1-201ENST00000473356 768 ntBASIC4.41□□□□□ -1.7
PCDHGA1Q9Y5H4 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.41□□□□□ -1.7
PCDHGA1Q9Y5H4 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PCDHGA1Q9Y5H4 AC008565.1-201ENST00000509046 885 ntBASIC4.41□□□□□ -1.7
PCDHGA1Q9Y5H4 PARP4P3-201ENST00000510265 317 ntBASIC4.41□□□□□ -1.7
PCDHGA1Q9Y5H4 AC005351.1-201ENST00000511152 786 ntBASIC4.41□□□□□ -1.7
PCDHGA1Q9Y5H4 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms