Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
PCDHB11Q9Y5F2 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PCDHB11Q9Y5F2 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.58□□□□□ -1.36
PCDHB11Q9Y5F2 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.58□□□□□ -1.36
PCDHB11Q9Y5F2 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PCDHB11Q9Y5F2 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC6.58□□□□□ -1.36
PCDHB11Q9Y5F2 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC6.58□□□□□ -1.36
PCDHB11Q9Y5F2 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PCDHB11Q9Y5F2 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PCDHB11Q9Y5F2 KCNMB3P1-202ENST00000493696 3389 ntBASIC6.58□□□□□ -1.36
PCDHB11Q9Y5F2 AC241584.2-201ENST00000637142 2090 ntBASIC6.58□□□□□ -1.36
PCDHB11Q9Y5F2 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
PCDHB11Q9Y5F2 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PCDHB11Q9Y5F2 RNU6-28P-201ENST00000362378 107 ntBASIC6.58□□□□□ -1.36
PCDHB11Q9Y5F2 RN7SKP171-201ENST00000364417 303 ntBASIC6.58□□□□□ -1.36
PCDHB11Q9Y5F2 Y_RNA.618-201ENST00000410949 107 ntBASIC6.58□□□□□ -1.36
PCDHB11Q9Y5F2 CHIAP3-201ENST00000423668 1133 ntBASIC6.58□□□□□ -1.36
PCDHB11Q9Y5F2 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC6.58□□□□□ -1.36
PCDHB11Q9Y5F2 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
PCDHB11Q9Y5F2 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
PCDHB11Q9Y5F2 AC114495.1-201ENST00000441274 436 ntBASIC6.58□□□□□ -1.36
PCDHB11Q9Y5F2 AC005297.2-201ENST00000450430 606 ntBASIC6.58□□□□□ -1.36
PCDHB11Q9Y5F2 NANOGP10-201ENST00000453325 895 ntBASIC6.58□□□□□ -1.36
PCDHB11Q9Y5F2 RPL23AP11-201ENST00000475260 469 ntBASIC6.58□□□□□ -1.36
PCDHB11Q9Y5F2 RPS27P20-201ENST00000492051 246 ntBASIC6.58□□□□□ -1.36
PCDHB11Q9Y5F2 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC6.58□□□□□ -1.36
PCDHB11Q9Y5F2 IGHVII-60-1-201ENST00000519079 256 ntBASIC6.58□□□□□ -1.36
PCDHB11Q9Y5F2 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC6.58□□□□□ -1.36
PCDHB11Q9Y5F2 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
PCDHB11Q9Y5F2 AC087752.2-201ENST00000521219 281 ntBASIC6.58□□□□□ -1.36
PCDHB11Q9Y5F2 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC6.58□□□□□ -1.36
PCDHB11Q9Y5F2 LSM6P2-201ENST00000552208 177 ntBASIC6.58□□□□□ -1.36
PCDHB11Q9Y5F2 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC6.58□□□□□ -1.36
PCDHB11Q9Y5F2 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC6.58□□□□□ -1.36
PCDHB11Q9Y5F2 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC6.58□□□□□ -1.36
PCDHB11Q9Y5F2 AC068790.3-201ENST00000602988 553 ntBASIC6.58□□□□□ -1.36
PCDHB11Q9Y5F2 AC096861.1-201ENST00000616652 240 ntBASIC6.58□□□□□ -1.36
PCDHB11Q9Y5F2 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC6.58□□□□□ -1.36
PCDHB11Q9Y5F2 AC007546.1-201ENST00000619452 559 ntBASIC6.58□□□□□ -1.36
PCDHB11Q9Y5F2 AL591926.1-201ENST00000620542 217 ntBASIC6.58□□□□□ -1.36
PCDHB11Q9Y5F2 AC073593.1-201ENST00000624500 411 ntBASIC6.58□□□□□ -1.36
PCDHB11Q9Y5F2 AC027559.1-201ENST00000636288 271 ntBASIC6.58□□□□□ -1.36
PCDHB11Q9Y5F2 AL354702.2-202ENST00000641481 890 ntBASIC6.58□□□□□ -1.36
PCDHB11Q9Y5F2 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC6.58□□□□□ -1.36
PCDHB11Q9Y5F2 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PCDHB11Q9Y5F2 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PCDHB11Q9Y5F2 TATDN2P3-201ENST00000452855 3665 ntBASIC6.58□□□□□ -1.36
PCDHB11Q9Y5F2 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PCDHB11Q9Y5F2 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC6.58□□□□□ -1.36
PCDHB11Q9Y5F2 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PCDHB11Q9Y5F2 AL355377.1-201ENST00000621125 1653 ntBASIC6.58□□□□□ -1.36
PCDHB11Q9Y5F2 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
PCDHB11Q9Y5F2 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
PCDHB11Q9Y5F2 AL596244.1-201ENST00000567068 3779 ntBASIC6.58□□□□□ -1.36
PCDHB11Q9Y5F2 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
PCDHB11Q9Y5F2 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
PCDHB11Q9Y5F2 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PCDHB11Q9Y5F2 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PCDHB11Q9Y5F2 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
PCDHB11Q9Y5F2 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PCDHB11Q9Y5F2 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PCDHB11Q9Y5F2 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PCDHB11Q9Y5F2 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PCDHB11Q9Y5F2 RNA5SP308-201ENST00000362532 115 ntBASIC6.57□□□□□ -1.36
PCDHB11Q9Y5F2 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
PCDHB11Q9Y5F2 RNU6-784P-201ENST00000384330 106 ntBASIC6.57□□□□□ -1.36
PCDHB11Q9Y5F2 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
PCDHB11Q9Y5F2 RNA5SP474-201ENST00000391234 90 ntBASIC6.57□□□□□ -1.36
PCDHB11Q9Y5F2 HMGB3P7-201ENST00000400214 611 ntBASIC6.57□□□□□ -1.36
PCDHB11Q9Y5F2 AL606923.1-201ENST00000406616 190 ntBASIC6.57□□□□□ -1.36
PCDHB11Q9Y5F2 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC6.57□□□□□ -1.36
PCDHB11Q9Y5F2 AC074085.1-201ENST00000413598 418 ntBASIC6.57□□□□□ -1.36
PCDHB11Q9Y5F2 AL663061.1-201ENST00000416625 580 ntBASIC6.57□□□□□ -1.36
PCDHB11Q9Y5F2 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC6.57□□□□□ -1.36
PCDHB11Q9Y5F2 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC6.57□□□□□ -1.36
PCDHB11Q9Y5F2 USP9YP16-201ENST00000430287 407 ntBASIC6.57□□□□□ -1.36
PCDHB11Q9Y5F2 AC003989.1-201ENST00000434569 565 ntBASIC6.57□□□□□ -1.36
PCDHB11Q9Y5F2 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC6.57□□□□□ -1.36
PCDHB11Q9Y5F2 SNRPBP1-201ENST00000443634 282 ntBASIC6.57□□□□□ -1.36
PCDHB11Q9Y5F2 OR7E116P-201ENST00000448529 957 ntBASIC6.57□□□□□ -1.36
PCDHB11Q9Y5F2 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PCDHB11Q9Y5F2 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC6.57□□□□□ -1.36
PCDHB11Q9Y5F2 USP9YP23-201ENST00000455085 407 ntBASIC6.57□□□□□ -1.36
PCDHB11Q9Y5F2 BTF3P15-201ENST00000455606 336 ntBASIC6.57□□□□□ -1.36
PCDHB11Q9Y5F2 AC005229.2-201ENST00000456995 399 ntBASIC6.57□□□□□ -1.36
PCDHB11Q9Y5F2 RPL7L1P8-201ENST00000469911 741 ntBASIC6.57□□□□□ -1.36
PCDHB11Q9Y5F2 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC6.57□□□□□ -1.36
PCDHB11Q9Y5F2 CCDC34P1-201ENST00000507441 517 ntBASIC6.57□□□□□ -1.36
PCDHB11Q9Y5F2 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC6.57□□□□□ -1.36
PCDHB11Q9Y5F2 MEPE-206ENST00000511670 550 ntTSL 4 BASIC6.57□□□□□ -1.36
PCDHB11Q9Y5F2 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC6.57□□□□□ -1.36
PCDHB11Q9Y5F2 RN7SKP196-201ENST00000516267 345 ntBASIC6.57□□□□□ -1.36
PCDHB11Q9Y5F2 ARL6IP1P3-201ENST00000524544 560 ntBASIC6.57□□□□□ -1.36
PCDHB11Q9Y5F2 AP005435.4-201ENST00000529514 284 ntBASIC6.57□□□□□ -1.36
PCDHB11Q9Y5F2 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.57□□□□□ -1.36
PCDHB11Q9Y5F2 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC6.57□□□□□ -1.36
PCDHB11Q9Y5F2 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
PCDHB11Q9Y5F2 RPL21P12-201ENST00000559810 515 ntBASIC6.57□□□□□ -1.36
PCDHB11Q9Y5F2 AC018552.3-201ENST00000567416 561 ntBASIC6.57□□□□□ -1.36
PCDHB11Q9Y5F2 AL590032.1-201ENST00000604920 252 ntBASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms