Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.84□□□□□ -1.47
CTDP1Q9Y5B0 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CTDP1Q9Y5B0 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC5.84□□□□□ -1.47
CTDP1Q9Y5B0 AC006927.3-201ENST00000638789 384 ntBASIC5.84□□□□□ -1.47
CTDP1Q9Y5B0 OR5BE1P-202ENST00000641168 1176 ntBASIC5.84□□□□□ -1.47
CTDP1Q9Y5B0 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.83□□□□□ -1.48
CTDP1Q9Y5B0 VN2R3P-201ENST00000422626 1412 ntBASIC5.83□□□□□ -1.48
CTDP1Q9Y5B0 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
CTDP1Q9Y5B0 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.83□□□□□ -1.48
CTDP1Q9Y5B0 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
CTDP1Q9Y5B0 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.83□□□□□ -1.48
CTDP1Q9Y5B0 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
CTDP1Q9Y5B0 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.83□□□□□ -1.48
CTDP1Q9Y5B0 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.83□□□□□ -1.48
CTDP1Q9Y5B0 FAM3C2-201ENST00000312214 681 ntBASIC5.83□□□□□ -1.48
CTDP1Q9Y5B0 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
CTDP1Q9Y5B0 RNU6-353P-201ENST00000364266 108 ntBASIC5.83□□□□□ -1.48
CTDP1Q9Y5B0 RNU6-549P-201ENST00000384433 107 ntBASIC5.83□□□□□ -1.48
CTDP1Q9Y5B0 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CTDP1Q9Y5B0 EIF4A1P3-201ENST00000411521 244 ntBASIC5.83□□□□□ -1.48
CTDP1Q9Y5B0 AC004022.2-201ENST00000413824 193 ntBASIC5.83□□□□□ -1.48
CTDP1Q9Y5B0 RPA2P2-201ENST00000419698 796 ntBASIC5.83□□□□□ -1.48
CTDP1Q9Y5B0 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.83□□□□□ -1.48
CTDP1Q9Y5B0 RPS26P47-201ENST00000427219 348 ntBASIC5.83□□□□□ -1.48
CTDP1Q9Y5B0 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CTDP1Q9Y5B0 SCP2-206ENST00000430330 938 ntTSL 2 BASIC5.83□□□□□ -1.48
CTDP1Q9Y5B0 CACYBPP1-201ENST00000438592 684 ntBASIC5.83□□□□□ -1.48
CTDP1Q9Y5B0 IGHV5-78-201ENST00000450948 295 ntBASIC5.83□□□□□ -1.48
CTDP1Q9Y5B0 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.83□□□□□ -1.48
CTDP1Q9Y5B0 AL035407.2-201ENST00000454090 378 ntBASIC5.83□□□□□ -1.48
CTDP1Q9Y5B0 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC5.83□□□□□ -1.48
CTDP1Q9Y5B0 RNU7-140P-201ENST00000459546 60 ntBASIC5.83□□□□□ -1.48
CTDP1Q9Y5B0 AC063943.1-201ENST00000465434 453 ntBASIC5.83□□□□□ -1.48
CTDP1Q9Y5B0 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC5.83□□□□□ -1.48
CTDP1Q9Y5B0 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC5.83□□□□□ -1.48
CTDP1Q9Y5B0 AC116353.3-201ENST00000511215 249 ntBASIC5.83□□□□□ -1.48
CTDP1Q9Y5B0 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC5.83□□□□□ -1.48
CTDP1Q9Y5B0 snoZ278.1-201ENST00000517059 112 ntBASIC5.83□□□□□ -1.48
CTDP1Q9Y5B0 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.83□□□□□ -1.48
CTDP1Q9Y5B0 BGLT3-201ENST00000564523 994 ntBASIC5.83□□□□□ -1.48
CTDP1Q9Y5B0 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.83□□□□□ -1.48
CTDP1Q9Y5B0 RN7SL52P-201ENST00000584271 284 ntBASIC5.83□□□□□ -1.48
CTDP1Q9Y5B0 EIF4A2P1-201ENST00000587313 1063 ntBASIC5.83□□□□□ -1.48
CTDP1Q9Y5B0 AC123786.2-201ENST00000603459 275 ntBASIC5.83□□□□□ -1.48
CTDP1Q9Y5B0 AP001521.2-201ENST00000608772 546 ntBASIC5.83□□□□□ -1.48
CTDP1Q9Y5B0 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC5.83□□□□□ -1.48
CTDP1Q9Y5B0 VN1R74P-201ENST00000613259 503 ntBASIC5.83□□□□□ -1.48
CTDP1Q9Y5B0 RN7SL722P-201ENST00000617780 284 ntBASIC5.83□□□□□ -1.48
CTDP1Q9Y5B0 RN7SL565P-201ENST00000618246 284 ntBASIC5.83□□□□□ -1.48
CTDP1Q9Y5B0 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CTDP1Q9Y5B0 MIR6839-201ENST00000620425 113 ntBASIC5.83□□□□□ -1.48
CTDP1Q9Y5B0 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC5.83□□□□□ -1.48
CTDP1Q9Y5B0 AL359757.1-201ENST00000623176 255 ntBASIC5.83□□□□□ -1.48
CTDP1Q9Y5B0 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.83□□□□□ -1.48
CTDP1Q9Y5B0 AC090582.1-201ENST00000636321 199 ntBASIC5.83□□□□□ -1.48
CTDP1Q9Y5B0 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC5.83□□□□□ -1.48
CTDP1Q9Y5B0 LINC01808-202ENST00000641680 1116 ntBASIC5.83□□□□□ -1.48
CTDP1Q9Y5B0 AC073055.1-201ENST00000456901 1621 ntBASIC5.83□□□□□ -1.48
CTDP1Q9Y5B0 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
CTDP1Q9Y5B0 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
CTDP1Q9Y5B0 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CTDP1Q9Y5B0 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.83□□□□□ -1.48
CTDP1Q9Y5B0 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
CTDP1Q9Y5B0 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CTDP1Q9Y5B0 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
CTDP1Q9Y5B0 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
CTDP1Q9Y5B0 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
CTDP1Q9Y5B0 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.83□□□□□ -1.48
CTDP1Q9Y5B0 AC012618.3-205ENST00000637896 1496 ntBASIC5.83□□□□□ -1.48
CTDP1Q9Y5B0 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.83□□□□□ -1.48
CTDP1Q9Y5B0 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.82□□□□□ -1.48
CTDP1Q9Y5B0 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
CTDP1Q9Y5B0 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CTDP1Q9Y5B0 AC025263.3-201ENST00000622965 1396 ntBASIC5.82□□□□□ -1.48
CTDP1Q9Y5B0 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CTDP1Q9Y5B0 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
CTDP1Q9Y5B0 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CTDP1Q9Y5B0 ASNSP1-201ENST00000518311 1939 ntBASIC5.82□□□□□ -1.48
CTDP1Q9Y5B0 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CTDP1Q9Y5B0 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
CTDP1Q9Y5B0 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
CTDP1Q9Y5B0 SNORA48.4-201ENST00000391089 134 ntBASIC5.82□□□□□ -1.48
CTDP1Q9Y5B0 AF274854.1-201ENST00000413236 615 ntBASIC5.82□□□□□ -1.48
CTDP1Q9Y5B0 RPL6P29-201ENST00000414863 865 ntBASIC5.82□□□□□ -1.48
CTDP1Q9Y5B0 LINC01347-201ENST00000417964 355 ntBASIC5.82□□□□□ -1.48
CTDP1Q9Y5B0 AF186996.5-201ENST00000418098 904 ntBASIC5.82□□□□□ -1.48
CTDP1Q9Y5B0 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.82□□□□□ -1.48
CTDP1Q9Y5B0 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.82□□□□□ -1.48
CTDP1Q9Y5B0 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.82□□□□□ -1.48
CTDP1Q9Y5B0 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC5.82□□□□□ -1.48
CTDP1Q9Y5B0 MTND6P18-201ENST00000439477 513 ntBASIC5.82□□□□□ -1.48
CTDP1Q9Y5B0 AC092170.1-201ENST00000440211 356 ntBASIC5.82□□□□□ -1.48
CTDP1Q9Y5B0 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.82□□□□□ -1.48
CTDP1Q9Y5B0 TCEA1P1-201ENST00000449716 880 ntBASIC5.82□□□□□ -1.48
CTDP1Q9Y5B0 BX842559.2-201ENST00000451418 605 ntBASIC5.82□□□□□ -1.48
CTDP1Q9Y5B0 VN1R32P-201ENST00000452234 905 ntBASIC5.82□□□□□ -1.48
CTDP1Q9Y5B0 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.82□□□□□ -1.48
CTDP1Q9Y5B0 AC006463.2-201ENST00000473326 348 ntBASIC5.82□□□□□ -1.48
CTDP1Q9Y5B0 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CTDP1Q9Y5B0 AC084024.2-201ENST00000503480 791 ntBASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms