Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PKP3Q9Y446 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.77□□□□□ -1.65
PKP3Q9Y446 AC104837.2-201ENST00000427236 424 ntBASIC4.77□□□□□ -1.65
PKP3Q9Y446 DYNLL1P7-201ENST00000429273 258 ntBASIC4.77□□□□□ -1.65
PKP3Q9Y446 NRBF2P3-201ENST00000432731 865 ntBASIC4.77□□□□□ -1.65
PKP3Q9Y446 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.77□□□□□ -1.65
PKP3Q9Y446 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.77□□□□□ -1.65
PKP3Q9Y446 HMGB1P16-201ENST00000447155 540 ntBASIC4.77□□□□□ -1.65
PKP3Q9Y446 AC079776.3-201ENST00000450665 370 ntBASIC4.77□□□□□ -1.65
PKP3Q9Y446 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.77□□□□□ -1.65
PKP3Q9Y446 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.77□□□□□ -1.65
PKP3Q9Y446 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC4.77□□□□□ -1.65
PKP3Q9Y446 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.77□□□□□ -1.65
PKP3Q9Y446 RN7SL826P-201ENST00000479724 288 ntBASIC4.77□□□□□ -1.65
PKP3Q9Y446 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC4.77□□□□□ -1.65
PKP3Q9Y446 RFPL4AP5-201ENST00000514977 504 ntBASIC4.77□□□□□ -1.65
PKP3Q9Y446 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PKP3Q9Y446 snoU109.6-201ENST00000516831 118 ntBASIC4.77□□□□□ -1.65
PKP3Q9Y446 RN7SKP283-201ENST00000517197 270 ntBASIC4.77□□□□□ -1.65
PKP3Q9Y446 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.77□□□□□ -1.65
PKP3Q9Y446 AC008562.1-201ENST00000521763 330 ntBASIC4.77□□□□□ -1.65
PKP3Q9Y446 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PKP3Q9Y446 AP001317.1-201ENST00000531194 960 ntBASIC4.77□□□□□ -1.65
PKP3Q9Y446 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.77□□□□□ -1.65
PKP3Q9Y446 SULT1C2P2-201ENST00000562517 294 ntBASIC4.77□□□□□ -1.65
PKP3Q9Y446 AC093249.4-201ENST00000564755 259 ntBASIC4.77□□□□□ -1.65
PKP3Q9Y446 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.77□□□□□ -1.65
PKP3Q9Y446 MIR4436B2-201ENST00000581415 91 ntBASIC4.77□□□□□ -1.65
PKP3Q9Y446 MIR4436B1-201ENST00000583272 91 ntBASIC4.77□□□□□ -1.65
PKP3Q9Y446 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC4.77□□□□□ -1.65
PKP3Q9Y446 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.77□□□□□ -1.65
PKP3Q9Y446 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC4.77□□□□□ -1.65
PKP3Q9Y446 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.77□□□□□ -1.65
PKP3Q9Y446 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC4.77□□□□□ -1.65
PKP3Q9Y446 AL157770.1-201ENST00000623049 439 ntBASIC4.77□□□□□ -1.65
PKP3Q9Y446 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.77□□□□□ -1.65
PKP3Q9Y446 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.77□□□□□ -1.65
PKP3Q9Y446 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PKP3Q9Y446 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
PKP3Q9Y446 AL445487.1-201ENST00000415694 1580 ntBASIC4.77□□□□□ -1.65
PKP3Q9Y446 AC012321.1-201ENST00000561622 1588 ntBASIC4.77□□□□□ -1.65
PKP3Q9Y446 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PKP3Q9Y446 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
PKP3Q9Y446 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.77□□□□□ -1.65
PKP3Q9Y446 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.77□□□□□ -1.65
PKP3Q9Y446 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
PKP3Q9Y446 AC126323.6-202ENST00000568092 3511 ntBASIC4.76□□□□□ -1.65
PKP3Q9Y446 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
PKP3Q9Y446 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.76□□□□□ -1.65
PKP3Q9Y446 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PKP3Q9Y446 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PKP3Q9Y446 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.76□□□□□ -1.65
PKP3Q9Y446 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
PKP3Q9Y446 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
PKP3Q9Y446 HMGB1P5-201ENST00000255320 642 ntBASIC4.76□□□□□ -1.65
PKP3Q9Y446 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.76□□□□□ -1.65
PKP3Q9Y446 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PKP3Q9Y446 RNU4-40P-201ENST00000364351 143 ntBASIC4.76□□□□□ -1.65
PKP3Q9Y446 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PKP3Q9Y446 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
PKP3Q9Y446 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PKP3Q9Y446 MIR550A3-201ENST00000390735 95 ntBASIC4.76□□□□□ -1.65
PKP3Q9Y446 CASP3-203ENST00000393588 677 ntTSL 4 BASIC4.76□□□□□ -1.65
PKP3Q9Y446 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC4.76□□□□□ -1.65
PKP3Q9Y446 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.76□□□□□ -1.65
PKP3Q9Y446 AC007394.1-201ENST00000421941 531 ntBASIC4.76□□□□□ -1.65
PKP3Q9Y446 GTF2IP23-201ENST00000423746 351 ntBASIC4.76□□□□□ -1.65
PKP3Q9Y446 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.76□□□□□ -1.65
PKP3Q9Y446 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC4.76□□□□□ -1.65
PKP3Q9Y446 FHP1-201ENST00000442741 703 ntBASIC4.76□□□□□ -1.65
PKP3Q9Y446 TPMTP4-201ENST00000450749 678 ntBASIC4.76□□□□□ -1.65
PKP3Q9Y446 AC119744.1-201ENST00000454746 1715 ntBASIC4.76□□□□□ -1.65
PKP3Q9Y446 ANKRD26P4-201ENST00000455755 950 ntBASIC4.76□□□□□ -1.65
PKP3Q9Y446 AC010486.2-201ENST00000505572 483 ntBASIC4.76□□□□□ -1.65
PKP3Q9Y446 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.76□□□□□ -1.65
PKP3Q9Y446 AC091868.1-201ENST00000508746 304 ntBASIC4.76□□□□□ -1.65
PKP3Q9Y446 AC093755.1-201ENST00000512950 1023 ntBASIC4.76□□□□□ -1.65
PKP3Q9Y446 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.76□□□□□ -1.65
PKP3Q9Y446 C1GALT1P3-201ENST00000522049 819 ntBASIC4.76□□□□□ -1.65
PKP3Q9Y446 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.76□□□□□ -1.65
PKP3Q9Y446 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.76□□□□□ -1.65
PKP3Q9Y446 AP001880.2-201ENST00000538233 448 ntBASIC4.76□□□□□ -1.65
PKP3Q9Y446 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.76□□□□□ -1.65
PKP3Q9Y446 AC091515.1-201ENST00000548110 679 ntBASIC4.76□□□□□ -1.65
PKP3Q9Y446 AC010198.2-201ENST00000550612 259 ntBASIC4.76□□□□□ -1.65
PKP3Q9Y446 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.76□□□□□ -1.65
PKP3Q9Y446 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
PKP3Q9Y446 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.76□□□□□ -1.65
PKP3Q9Y446 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC4.76□□□□□ -1.65
PKP3Q9Y446 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.76□□□□□ -1.65
PKP3Q9Y446 AC008088.1-201ENST00000580993 280 ntBASIC4.76□□□□□ -1.65
PKP3Q9Y446 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.76□□□□□ -1.65
PKP3Q9Y446 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.76□□□□□ -1.65
PKP3Q9Y446 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC4.76□□□□□ -1.65
PKP3Q9Y446 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.76□□□□□ -1.65
PKP3Q9Y446 AC022509.4-201ENST00000621404 572 ntBASIC4.76□□□□□ -1.65
PKP3Q9Y446 AC131159.1-201ENST00000621854 213 ntBASIC4.76□□□□□ -1.65
PKP3Q9Y446 AL442639.1-201ENST00000625030 1899 ntBASIC4.76□□□□□ -1.65
PKP3Q9Y446 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.76□□□□□ -1.65
PKP3Q9Y446 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms